RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 FSCN2O14926 492 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 PER2O15055 1255 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 SLC37A4O43826 429 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 FGFR4P22455 802 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 QARSP47897 775 aaKnown RBP23.63■■□□□ 1.37
NEDD8-201ENST00000250495 PPP2R5CQ13362 524 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 ANO5Q75V66 913 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 ZNF410Q86VK4 478 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 SMRP1Q8NCR6 262 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 WASF1Q92558 559 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 SH2D3AQ9BRG2 576 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 KCNMB3Q9NPA1 279 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 NGRNQ9NPE2 291 aaKnown RBP23.63■■□□□ 1.37
NEDD8-201ENST00000250495 TPCN1Q9ULQ1 816 aa23.63■■□□□ 1.37
NEDD8-201ENST00000250495 A0A087WZ62 844 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 MARCH6O60337 910 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 CCNT1O60563 726 aaKnown RBP23.62■■□□□ 1.37
NEDD8-201ENST00000250495 CSDE1O75534 798 aaKnown RBP23.62■■□□□ 1.37
NEDD8-201ENST00000250495 GLP2RO95838 553 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 SFPQP23246 707 aaKnown RBP eCLIP23.62■■□□□ 1.37
NEDD8-201ENST00000250495 DUSP6Q16828 381 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 ZNF598Q86UK7 904 aaKnown RBP23.62■■□□□ 1.37
NEDD8-201ENST00000250495 RHPN2Q8IUC4 686 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 EXOC8Q8IYI6 725 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 FDXACB1Q9BRP7 624 aaPredicted RBP23.62■■□□□ 1.37
NEDD8-201ENST00000250495 SPG21Q9NZD8 308 aa23.62■■□□□ 1.37
NEDD8-201ENST00000250495 BARX2Q9UMQ3 279 aaPredicted RBP23.62■■□□□ 1.37
NEDD8-201ENST00000250495 EML1O00423 815 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 TBX3O15119 743 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 P4HBP07237 508 aaKnown RBP23.61■■□□□ 1.37
NEDD8-201ENST00000250495 SRGAP2BP0DMP2 458 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 SKIP12755 728 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 CLLU1OSQ5K130 101 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 PIK3AP1Q6ZUJ8 805 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 RSPH1Q8WYR4 309 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 TRAIPQ9BWF2 469 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 MRPL9Q9BYD2 267 aaKnown RBP23.61■■□□□ 1.37
NEDD8-201ENST00000250495 ENTPD7Q9NQZ7 604 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 CYP26B1Q9NR63 512 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 VAV3Q9UKW4 847 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 PPME1Q9Y570 386 aa23.61■■□□□ 1.37
NEDD8-201ENST00000250495 PLPP4Q5VZY2 271 aa23.6■■□□□ 1.37
NEDD8-201ENST00000250495 HELQQ8TDG4 1101 aa23.6■■□□□ 1.37
NEDD8-201ENST00000250495 TCF25Q9BQ70 676 aa23.6■■□□□ 1.37
NEDD8-201ENST00000250495 ORC3Q9UBD5 711 aaPredicted RBP23.6■■□□□ 1.37
NEDD8-201ENST00000250495 BAG4O95429 457 aaKnown RBP23.59■■□□□ 1.37
NEDD8-201ENST00000250495 PHKA2P46019 1235 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 EPHA7Q15375 998 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 PLA2G4FQ68DD2 849 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 TWF2Q6IBS0 349 aaKnown RBP23.59■■□□□ 1.37
NEDD8-201ENST00000250495 TMEM184AQ6ZMB5 413 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 TMC7Q7Z402 723 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 RNF135Q8IUD6 432 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 SLC7A3Q8WY07 619 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 GJB4Q9NTQ9 266 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 PPP4R2Q9NY27 417 aa23.59■■□□□ 1.37
NEDD8-201ENST00000250495 CARNS1A5YM72 827 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 CTDNEP1O95476 244 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 ATF7P17544 494 aaPredicted RBP23.58■■□□□ 1.37
NEDD8-201ENST00000250495 ALDH7A1P49419 539 aaKnown RBP23.58■■□□□ 1.37
NEDD8-201ENST00000250495 AK2P54819 239 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 BMS1Q14692 1282 aaKnown RBP23.58■■□□□ 1.37
NEDD8-201ENST00000250495 HERC4Q5GLZ8 1057 aaPredicted RBP23.58■■□□□ 1.37
NEDD8-201ENST00000250495 OTUD6AQ7L8S5 288 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 CATSPER4Q7RTX7 472 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 OXER1Q8TDS5 423 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 HAS1Q92839 578 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 CEP170P1Q96L14 293 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 NLRP4Q96MN2 994 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 BRMS1Q9HCU9 246 aa23.58■■□□□ 1.37
NEDD8-201ENST00000250495 PIN4Q9Y237 131 aaKnown RBP23.58■■□□□ 1.37
NEDD8-201ENST00000250495 USP15Q9Y4E8 981 aaPredicted RBP23.58■■□□□ 1.37
NEDD8-201ENST00000250495 EIF5BO60841 1220 aaKnown RBP23.57■■□□□ 1.36
NEDD8-201ENST00000250495 PBX3P40426 434 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 NPEPPSP55786 919 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 KSR1Q8IVT5 923 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 C4orf19Q8IY42 314 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 SLFN12Q8IYM2 578 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 SLC39A11Q8N1S5 342 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 PHF7Q9BWX1 381 aaPredicted RBP23.57■■□□□ 1.36
NEDD8-201ENST00000250495 COL4A3BPQ9Y5P4 624 aa23.57■■□□□ 1.36
NEDD8-201ENST00000250495 LOC730098B7Z3J9 87 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 ZNF623O75123 536 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 KRT2P35908 639 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 RFC5P40937 340 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 RAB27AP51159 221 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 POLGP54098 1239 aaPredicted RBP23.56■■□□□ 1.36
NEDD8-201ENST00000250495 RBM10P98175 930 aaKnown RBP23.56■■□□□ 1.36
NEDD8-201ENST00000250495 KCNC3Q14003 757 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 VN1R2Q8NFZ6 395 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 DHX33Q9H6R0 707 aaKnown RBP23.56■■□□□ 1.36
NEDD8-201ENST00000250495 FAM105AQ9NUU6 356 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 MUTYHQ9UIF7 546 aa23.56■■□□□ 1.36
NEDD8-201ENST00000250495 HIDE1A8MVS5 230 aa23.55■■□□□ 1.36
NEDD8-201ENST00000250495 YWHABP31946 246 aaKnown RBP23.55■■□□□ 1.36
NEDD8-201ENST00000250495 TECP42680 631 aa23.55■■□□□ 1.36
NEDD8-201ENST00000250495 BCAR1P56945 870 aa23.55■■□□□ 1.36
NEDD8-201ENST00000250495 SMC1AQ14683 1233 aaKnown RBP23.55■■□□□ 1.36
NEDD8-201ENST00000250495 GLB1LQ6UWU2 654 aa23.55■■□□□ 1.36
NEDD8-201ENST00000250495 POTEDQ86YR6 584 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms