RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
HOXD3-201ENST00000249440 DIS3Q9Y2L1 958 aaKnown RBP17.83■□□□□ 0.44
HOXD3-201ENST00000249440 NCANO14594 1321 aa17.83■□□□□ 0.44
HOXD3-201ENST00000249440 BHMG1C9JSJ3 638 aaPredicted RBP17.82■□□□□ 0.44
HOXD3-201ENST00000249440 EXOC3O60645 756 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 NR1D1P20393 614 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 RFX1P22670 979 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 ATP1A2P50993 1020 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 BFSP1Q12934 665 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 PDCLQ13371 301 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 CEP85LQ5SZL2 805 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 LXNQ9BS40 222 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 GPR88Q9GZN0 384 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 OSGEPQ9NPF4 335 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 PPP1R1BQ9UD71 204 aaPredicted RBP17.82■□□□□ 0.44
HOXD3-201ENST00000249440 AMACRQ9UHK6 382 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 TTC7AQ9ULT0 858 aaPredicted RBP17.82■□□□□ 0.44
HOXD3-201ENST00000249440 ARHGEF35A5YM69 484 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 BUB1BO60566 1050 aaPredicted RBP17.82■□□□□ 0.44
HOXD3-201ENST00000249440 ARP10275 920 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 MYL7Q01449 175 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 MYBPC2Q14324 1141 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 OLIG1Q8TAK6 271 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 PPM1EQ8WY54 764 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 SYT11Q9BT88 431 aa17.82■□□□□ 0.44
HOXD3-201ENST00000249440 IPO5O00410 1097 aaKnown RBP17.81■□□□□ 0.44
HOXD3-201ENST00000249440 TRIM49P0CI25 452 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 TRIM49CP0CI26 452 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 TNFAIP3P21580 790 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 HSD17B3P37058 310 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 B3GNT9Q6UX72 402 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 NEK9Q8TD19 979 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 CNKSR1Q969H4 720 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 RNPC3Q96LT9 517 aaKnown RBP17.81■□□□□ 0.44
HOXD3-201ENST00000249440 ZBTB21Q9ULJ3 1066 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 PLA2G6O60733 806 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 ABCB4P21439 1286 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 PPATQ06203 517 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 FAM160B2Q86V87 743 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 DDX42Q86XP3 938 aaKnown RBP eCLIP17.81■□□□□ 0.44
HOXD3-201ENST00000249440 RIT2Q99578 217 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 STRA6Q9BX79 667 aa17.81■□□□□ 0.44
HOXD3-201ENST00000249440 UTP11Q9Y3A2 253 aaKnown RBP17.81■□□□□ 0.44
HOXD3-201ENST00000249440 ANKRD65E5RJM6 399 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 NDUFAB1O14561 156 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 ZEB2O60315 1214 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 HIP1RO75146 1068 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 PPP1R37O75864 691 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 MYZAPP0CAP1 466 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 BCRP11274 1271 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 ITGA4P13612 1032 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 KCNA3P22001 575 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 CETN1Q12798 172 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 MTMR3Q13615 1198 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 VCPKMTQ9H867 229 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 TMBIM4Q9HC24 238 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 ANKRD62A6NC57 917 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 FGGP02679 453 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 KRT13P13646 458 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 CTNNA1P35221 906 aaKnown RBP17.8■□□□□ 0.44
HOXD3-201ENST00000249440 PPP2R5EQ16537 467 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 ARHGAP44Q17R89 818 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 RDH13Q8NBN7 331 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 BANK1Q8NDB2 785 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 SUPT20HQ8NEM7 779 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 FAM151AQ8WW52 585 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 SEC14L1Q92503 715 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 HOOK2Q96ED9 719 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 NAP1L3Q99457 506 aaPredicted RBP17.8■□□□□ 0.44
HOXD3-201ENST00000249440 SGIP1Q9BQI5 828 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 CARD9Q9H257 536 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 RABEP2Q9H5N1 569 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 TMEM206Q9H813 350 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 FAM114A2Q9NRY5 505 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 LARSQ9P2J5 1176 aaKnown RBP17.8■□□□□ 0.44
HOXD3-201ENST00000249440 PPP1R9AQ9ULJ8 1098 aa17.8■□□□□ 0.44
HOXD3-201ENST00000249440 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 DAPK3O43293 454 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 DPEP1P16444 411 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 LSP1P33241 339 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 PTGER2P43116 358 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
HOXD3-201ENST00000249440 PLS1Q14651 629 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 KIF22Q14807 665 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 PHLDB3Q6NSJ2 640 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 INTS8Q75QN2 995 aaKnown RBP17.79■□□□□ 0.44
HOXD3-201ENST00000249440 ARFGAP2Q8N6H7 521 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 VTI1AQ96AJ9 217 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 MXRA8Q9BRK3 442 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 SEPT11Q9NVA2 429 aaKnown RBP17.79■□□□□ 0.44
HOXD3-201ENST00000249440 FAM169AQ9Y6X4 670 aa17.79■□□□□ 0.44
HOXD3-201ENST00000249440 A0A087WUV0 522 aaPredicted RBP17.78■□□□□ 0.44
HOXD3-201ENST00000249440 K7ENM7 598 aa17.78■□□□□ 0.44
HOXD3-201ENST00000249440 TTI1O43156 1089 aa17.78■□□□□ 0.44
HOXD3-201ENST00000249440 ALCAMQ13740 583 aa17.78■□□□□ 0.44
HOXD3-201ENST00000249440 CLUL1Q15846 466 aa17.78■□□□□ 0.44
HOXD3-201ENST00000249440 PADI6Q6TGC4 694 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms