RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CIAPIN1Q6FI81 312 aa18.9■□□□□ 0.62
LRFN3-201ENST00000246529 PALB2Q86YC2 1186 aa18.9■□□□□ 0.62
LRFN3-201ENST00000246529 SLC38A10Q9HBR0 1119 aa18.9■□□□□ 0.62
LRFN3-201ENST00000246529 GDF3Q9NR23 364 aa18.9■□□□□ 0.62
LRFN3-201ENST00000246529 TAS2R14Q9NYV8 317 aa18.9■□□□□ 0.62
LRFN3-201ENST00000246529 APEX2Q9UBZ4 518 aa18.9■□□□□ 0.62
LRFN3-201ENST00000246529 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.62
LRFN3-201ENST00000246529 RAD51CO43502 376 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 TNIP1Q15025 636 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 PLA2G4FQ68DD2 849 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 METTL13Q8N6R0 699 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 NEK9Q8TD19 979 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 AFAP1L1Q8TED9 768 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 CASKIN2Q8WXE0 1202 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 RUBCNQ92622 972 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 SEPT11Q9NVA2 429 aaKnown RBP18.89■□□□□ 0.61
LRFN3-201ENST00000246529 BACH1O14867 736 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 QARSP47897 775 aaKnown RBP18.89■□□□□ 0.61
LRFN3-201ENST00000246529 PPP2R5AQ15172 486 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 PEX26Q7Z412 305 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 DAAM2Q86T65 1068 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 MCF2L2Q86YR7 1114 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 IFT20Q8IY31 132 aa18.89■□□□□ 0.61
LRFN3-201ENST00000246529 LARSQ9P2J5 1176 aaKnown RBP18.89■□□□□ 0.61
LRFN3-201ENST00000246529 EMSYQ7Z589 1322 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 FOXN3O00409 490 aaPredicted RBP18.88■□□□□ 0.61
LRFN3-201ENST00000246529 ZBTB48P10074 688 aaPredicted RBP18.88■□□□□ 0.61
LRFN3-201ENST00000246529 VCAM1P19320 739 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 YWHABP31946 246 aaKnown RBP18.88■□□□□ 0.61
LRFN3-201ENST00000246529 GCLMP48507 274 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 GUCY2FP51841 1108 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 NPEPPSP55786 919 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 PPP3CAQ08209 521 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 PGM5Q15124 567 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 LMO3Q8TAP4 145 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 KIAA1683Q9H0B3 1180 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 SLC16A4O15374 487 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 ACTN2P35609 894 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 IFI16Q16666 785 aaKnown RBP18.88■□□□□ 0.61
LRFN3-201ENST00000246529 EMBQ6PCB8 327 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 ARHGEF19Q8IW93 802 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 GOLGA5Q8TBA6 731 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 PLEKHO2Q8TD55 490 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 SYT11Q9BT88 431 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 CALCOCO1Q9P1Z2 691 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 TMEM59LQ9UK28 342 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 FZD1Q9UP38 647 aa18.88■□□□□ 0.61
LRFN3-201ENST00000246529 GOLGA8IPA6NC78 632 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 GOLGA8JA6NMD2 632 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 CCNE2O96020 404 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 PLS3P13797 630 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 ANXA13P27216 316 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 TNFRSF8P28908 595 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 SAMD7Q7Z3H4 446 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 LPAR1Q92633 364 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 CAVIN3Q969G5 261 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 ARHGEF26Q96DR7 871 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 RMDN3Q96TC7 470 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 RPAP3Q9H6T3 665 aaPredicted RBP18.87■□□□□ 0.61
LRFN3-201ENST00000246529 RGS17Q9UGC6 210 aaPredicted RBP18.87■□□□□ 0.61
LRFN3-201ENST00000246529 RGPD3A6NKT7 1758 aaPredicted RBP18.87■□□□□ 0.61
LRFN3-201ENST00000246529 RGPD4Q7Z3J3 1758 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 PEX3P56589 373 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 FOXR1Q6PIV2 292 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 NIPA1Q7RTP0 329 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 SLFN11Q7Z7L1 901 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 SLC35G2Q8TBE7 412 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 CCDC43Q96MW1 224 aaKnown RBP18.87■□□□□ 0.61
LRFN3-201ENST00000246529 KIFC3Q9BVG8 833 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 UBE2TQ9NPD8 197 aaPredicted RBP18.87■□□□□ 0.61
LRFN3-201ENST00000246529 STXBP5LQ9Y2K9 1186 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 RIPK3Q9Y572 518 aa18.87■□□□□ 0.61
LRFN3-201ENST00000246529 TESPA1A2RU30 521 aaPredicted RBP18.86■□□□□ 0.61
LRFN3-201ENST00000246529 BUB1BO60566 1050 aaPredicted RBP18.86■□□□□ 0.61
LRFN3-201ENST00000246529 KRT13P13646 458 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 VAMP7P51809 220 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 C1orf220Q5T0J3 134 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 HAUS6Q7Z4H7 955 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 NT5DC3Q86UY8 548 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 GOLGA6L1Q8N7Z2 621 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 ACCSQ96QU6 501 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 DBR1Q9UK59 544 aaKnown RBP18.86■□□□□ 0.61
LRFN3-201ENST00000246529 PPP1R9AQ9ULJ8 1098 aa18.86■□□□□ 0.61
LRFN3-201ENST00000246529 NOC2LQ9Y3T9 749 aaKnown RBP18.86■□□□□ 0.61
LRFN3-201ENST00000246529 ITGA4P13612 1032 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 LMNB1P20700 586 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 FAM102BQ5T8I3 360 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 KAT5Q92993 513 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 ATG4CQ96DT6 458 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 PBKQ96KB5 322 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 THAP2Q9H0W7 228 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 HSPBP1Q9NZL4 362 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 A0A0A6YYK5 440 aaPredicted RBP18.85■□□□□ 0.61
LRFN3-201ENST00000246529 TNNC1P63316 161 aa18.85■□□□□ 0.61
LRFN3-201ENST00000246529 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms