RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 DHX34Q14147 1143 aaKnown RBP9.96□□□□□ -0.81
SRSF6-201ENST00000244020 ANKRD20A2Q5SQ80 823 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 ANKRD20A1Q5TYW2 823 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 ANKRD20A3Q5VUR7 823 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 SPATA21Q7Z572 469 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 COL23A1Q86Y22 540 aaPredicted RBP9.96□□□□□ -0.81
SRSF6-201ENST00000244020 CEP70Q8NHQ1 597 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 SCFD1Q8WVM8 642 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 ATXN2LQ8WWM7 1075 aaKnown RBP9.96□□□□□ -0.81
SRSF6-201ENST00000244020 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.81
SRSF6-201ENST00000244020 SPZ1Q9BXG8 430 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 ARL2BPQ9Y2Y0 163 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 KDM3AQ9Y4C1 1321 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 MX2P20592 715 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 NCALDP61601 193 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 TRMT1LQ7Z2T5 733 aaKnown RBP9.96□□□□□ -0.81
SRSF6-201ENST00000244020 TTC16Q8NEE8 873 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 SH3RF3Q8TEJ3 882 aaPredicted RBP9.96□□□□□ -0.81
SRSF6-201ENST00000244020 RUNDC3BQ96NL0 473 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 MTMR9Q96QG7 549 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 MTFR1LQ9H019 292 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 TBK1Q9UHD2 729 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 ZNF652Q9Y2D9 606 aa9.96□□□□□ -0.81
SRSF6-201ENST00000244020 AFF2P51816 1311 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 POTEB3A0JP26 581 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 TMEM120BA0PK00 339 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 POTECB2RU33 542 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 H0Y3Z8 333 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 TBCAO75347 108 aaKnown RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 GCNT3O95395 438 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 NUDT17P0C025 328 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 EEF2P13639 858 aaKnown RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 GJC1P36383 396 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 MAPK7Q13164 816 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 CLUL1Q15846 466 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 SLC35G1Q2M3R5 365 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 POTEBQ6S5H4 581 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 ZNF483Q8TF39 744 aaPredicted RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 RFFLQ8WZ73 363 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 DIS3Q9Y2L1 958 aaKnown RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 CAMTA1Q9Y6Y1 1673 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 PODXLO00592 558 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 RARAP10276 462 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 DESP17661 470 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 KLRK1P26718 216 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 ORC2Q13416 577 aaPredicted RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 CCDC137Q6PK04 289 aaKnown RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 PPP4R3CPQ6ZMV5 832 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 RASGEF1CQ8N431 466 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 DNAJC19Q96DA6 116 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 DNAJC17Q9NVM6 304 aaKnown RBP9.96□□□□□ -0.82
SRSF6-201ENST00000244020 PNMA3Q9UL41 463 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 TRIM33Q9UPN9 1127 aa9.96□□□□□ -0.82
SRSF6-201ENST00000244020 ZNF804BA4D1E1 1349 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L5A8MUK1 530 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 MEIS1O00470 390 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 DDX3XO00571 662 aaKnown RBP eCLIP9.95□□□□□ -0.823e-31■■■■□ 26.2
SRSF6-201ENST00000244020 PABPC4Q13310 644 aaKnown RBP eCLIP9.95□□□□□ -0.823e-6■□□□□ 8.6
SRSF6-201ENST00000244020 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 ZCWPW2Q504Y3 356 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 DUPD1Q68J44 220 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 HES6Q96HZ4 224 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 ZNF570Q96NI8 536 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 TGS1Q96RS0 853 aaKnown RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 CCDC87Q9NVE4 849 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 ASIC3Q9UHC3 531 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 MESDQ14696 234 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 CNGA2Q16280 664 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 ECM1Q16610 540 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 FAM47EQ6ZV65 393 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 FRMD5Q7Z6J6 570 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 CARD9Q9H257 536 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 BSDC1Q9NW68 430 aaPredicted RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 SPOPO43791 374 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 UPP2O95045 317 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 TPD52P55327 224 aaPredicted RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 ZBTB17Q13105 803 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 KNOP1Q1ED39 458 aaKnown RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 SPDYCQ5MJ68 293 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 SLC17A8Q8NDX2 589 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 RBM46Q8TBY0 533 aaKnown RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 NAF1Q96HR8 494 aaKnown RBP9.95□□□□□ -0.82
SRSF6-201ENST00000244020 ANKIB1Q9P2G1 1089 aa9.95□□□□□ -0.82
SRSF6-201ENST00000244020 MYBL1P10243 752 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 BRAFP15056 766 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 CHRNA3P32297 505 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 EDRF1Q3B7T1 1238 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 ERFEQ4G0M1 354 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 THEMIS2Q5TEJ8 643 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 AADACL2Q6P093 401 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 SDCCAG8Q86SQ7 713 aaPredicted RBP9.94□□□□□ -0.82
SRSF6-201ENST00000244020 PARD3BQ8TEW8 1205 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
SRSF6-201ENST00000244020 PITPNM3Q9BZ71 974 aa9.94□□□□□ -0.82
SRSF6-201ENST00000244020 ERVK-5Q9HDB9 667 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms