RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KCND1Q9NSA2 647 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 LARSQ9P2J5 1176 aaKnown RBP14.55□□□□□ -0.08
SLIRP-201ENST00000238688 TRAF3IP3Q9Y228 551 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 SAMM50Q9Y512 469 aa14.55□□□□□ -0.08
SLIRP-201ENST00000238688 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 H0YCG3 227 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 N4BP3O15049 544 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 TIMP1P01033 207 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 PBX1P40424 430 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 STX17P56962 302 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 CTTNQ14247 550 aaKnown RBP14.54□□□□□ -0.08
SLIRP-201ENST00000238688 FAM109BQ6ICB4 259 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-201ENST00000238688 C16orf59Q7L2K0 433 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 EXOC8Q8IYI6 725 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 HVCN1Q96D96 273 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 DUSP9Q99956 384 aaKnown RBP14.54□□□□□ -0.08
SLIRP-201ENST00000238688 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
SLIRP-201ENST00000238688 SRRTQ9BXP5 876 aaKnown RBP14.54□□□□□ -0.08
SLIRP-201ENST00000238688 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 SCN5AQ14524 2016 aa14.54□□□□□ -0.08
SLIRP-201ENST00000238688 GBF1Q92538 1859 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 MROH7Q68CQ1 1323 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 IGSF9BQ9UPX0 1349 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 CALUO43852 315 aaPredicted RBP14.53□□□□□ -0.08
SLIRP-201ENST00000238688 RGS20O76081 388 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 ATG7O95352 703 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 ARIH2O95376 493 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 YWHABP31946 246 aaKnown RBP14.53□□□□□ -0.08
SLIRP-201ENST00000238688 RARRES1P49788 294 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 COPB1P53618 953 aaKnown RBP14.53□□□□□ -0.08
SLIRP-201ENST00000238688 PSMC6P62333 389 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 TBX2Q13207 712 aaPredicted RBP14.53□□□□□ -0.08
SLIRP-201ENST00000238688 KNOP1Q1ED39 458 aaKnown RBP14.53□□□□□ -0.08
SLIRP-201ENST00000238688 ANKRD40Q6AI12 368 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 FILIP1Q7Z7B0 1213 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 MCPH1Q8NEM0 835 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 ZNF507Q8TCN5 953 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 COPS5Q92905 334 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 VTI1AQ96AJ9 217 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 FAM167AQ96KS9 214 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 GUCD1Q96NT3 240 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 TYW1Q9NV66 732 aaKnown RBP14.53□□□□□ -0.08
SLIRP-201ENST00000238688 TET1Q8NFU7 2136 aa14.53□□□□□ -0.08
SLIRP-201ENST00000238688 SLC16A3O15427 465 aaKnown RBP14.52□□□□□ -0.09
SLIRP-201ENST00000238688 CABYRO75952 493 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 TUBB4AP04350 444 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 SLC26A2P50443 739 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 FPGSQ05932 587 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 ITGA7Q13683 1181 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 FIGNQ5HY92 759 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 MFSD5Q6N075 450 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 CCDC62Q6P9F0 684 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 PADI6Q6TGC4 694 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 METTL7BQ6UX53 244 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 IRF2BP1Q8IU81 584 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 SCFD1Q8WVM8 642 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 KIFAP3Q92845 792 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 NAP1L5Q96NT1 182 aaPredicted RBP14.52□□□□□ -0.09
SLIRP-201ENST00000238688 PANX2Q96RD6 677 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 MKNK1Q9BUB5 465 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 RUSC1Q9BVN2 902 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 KCTD10Q9H3F6 313 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 SEMA6BQ9H3T3 888 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 METTL14Q9HCE5 456 aaKnown RBP14.52□□□□□ -0.09
SLIRP-201ENST00000238688 DOCK5Q9H7D0 1870 aa14.52□□□□□ -0.09
SLIRP-201ENST00000238688 UMODL1Q5DID0 1318 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 PHLPP2Q6ZVD8 1323 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 IGKV6D-21A0A0A0MT36 114 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 CETN3O15182 167 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 ATP9AO75110 1047 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 DGAT1O75907 488 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 CCNE2O96020 404 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 ACTR2P61160 394 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 PURAQ00577 322 aaKnown RBP14.51□□□□□ -0.09
SLIRP-201ENST00000238688 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 XKR3Q5GH77 459 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 FKBP15Q5T1M5 1219 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 FAM160B1Q5W0V3 765 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 ABHD15Q6UXT9 468 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 HS2ST1Q7LGA3 356 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 PPFIBP1Q86W92 1011 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 SFR1Q86XK3 245 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 FAM178BQ8IXR5 827 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 BANK1Q8NDB2 785 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 AFAP1L1Q8TED9 768 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 PIGOQ8TEQ8 1089 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 VWCEQ96DN2 955 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 CNOT6LQ96LI5 555 aaKnown RBP14.51□□□□□ -0.09
SLIRP-201ENST00000238688 ERGIC2Q96RQ1 377 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.51□□□□□ -0.096e-7■■■□□ 18.5
SLIRP-201ENST00000238688 TUBGCP2Q9BSJ2 902 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 TMEM206Q9H813 350 aa14.51□□□□□ -0.09
SLIRP-201ENST00000238688 MRPL44Q9H9J2 332 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms