RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PKD2L1Q9P0L9 805 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 ZNF112Q9UJU3 913 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 ASTN2O75129 1339 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-201ENST00000237186 VWA5AO00534 786 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 MAFGO15525 162 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 KIF4AO95239 1232 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 PSMC5P62195 406 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 C8orf74Q6P047 294 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 EMBQ6PCB8 327 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 CCDC102AQ96A19 550 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 RMDN3Q96TC7 470 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 RPAP3Q9H6T3 665 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-201ENST00000237186 GDF3Q9NR23 364 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 VPS18Q9P253 973 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 ZHX1Q9UKY1 873 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-201ENST00000237186 USP20Q9Y2K6 914 aa17.6■□□□□ 0.41
UBE3D-201ENST00000237186 WDR64B1ANS9 1081 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 CLSTN1O94985 981 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 TRIM49P0CI25 452 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 TRIM49CP0CI26 452 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 KRT13P13646 458 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 EIF2AK2P19525 551 aaKnown RBP17.59■□□□□ 0.41
UBE3D-201ENST00000237186 MATR3P43243 847 aaKnown RBP eCLIP17.59■□□□□ 0.412e-7■■■■■ 26.8
UBE3D-201ENST00000237186 TNNT3P45378 269 aaPredicted RBP17.59■□□□□ 0.41
UBE3D-201ENST00000237186 NCKAP1LP55160 1127 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 BACE1P56817 501 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 MYL7Q01449 175 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 KRT76Q01546 638 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 DGKZQ13574 1117 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 MTMR2Q13614 643 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 RNF207Q6ZRF8 634 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 LNX1Q8TBB1 728 aaPredicted RBP17.59■□□□□ 0.41
UBE3D-201ENST00000237186 TAF4BQ92750 862 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 SENP7Q9BQF6 1050 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 SCAF8Q9UPN6 1271 aaKnown RBP17.59■□□□□ 0.41
UBE3D-201ENST00000237186 STXBP5LQ9Y2K9 1186 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 FAN1Q9Y2M0 1017 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 SAMM50Q9Y512 469 aa17.59■□□□□ 0.41
UBE3D-201ENST00000237186 EPHB4P54760 987 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 NNTQ13423 1086 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 DCAF15Q66K64 600 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 VSIG10LQ86VR7 867 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 SYCE1Q8N0S2 351 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 ACTRT1Q8TDG2 376 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 CAVIN3Q969G5 261 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 MAF1Q9H063 256 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 HOMER2Q9NSB8 354 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 SUCLA2Q9P2R7 463 aaPredicted RBP17.58■□□□□ 0.41
UBE3D-201ENST00000237186 CTDP1Q9Y5B0 961 aaPredicted RBP17.58■□□□□ 0.41
UBE3D-201ENST00000237186 LTBP3Q9NS15 1303 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 MYH10P35580 1976 aa17.58■□□□□ 0.41
UBE3D-201ENST00000237186 A0A0U1RQG5 324 aaPredicted RBP17.58■□□□□ 0.4
UBE3D-201ENST00000237186 ATP9AO75110 1047 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 NOP2P46087 812 aaKnown RBP17.58■□□□□ 0.4
UBE3D-201ENST00000237186 OAZ1P54368 228 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 KIF22Q14807 665 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 IFT20Q8IY31 132 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 XXYLT1Q8NBI6 393 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 REPS2Q8NFH8 660 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 U2AF1L4Q8WU68 220 aaKnown RBP17.58■□□□□ 0.4
UBE3D-201ENST00000237186 C12orf42Q96LP6 360 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 HACL1Q9UJ83 578 aa17.58■□□□□ 0.4
UBE3D-201ENST00000237186 PACSIN2Q9UNF0 486 aaPredicted RBP17.58■□□□□ 0.4
UBE3D-201ENST00000237186 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 AGPSO00116 658 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 CCNE2O96020 404 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 TMEM253P0C7T8 217 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 VAMP7P51809 220 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 GALCP54803 685 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 GYS2P54840 703 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 SLC7A5Q01650 507 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 CETN1Q12798 172 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 ZNF746Q6NUN9 644 aaPredicted RBP17.57■□□□□ 0.4
UBE3D-201ENST00000237186 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 GSPT2Q8IYD1 628 aaKnown RBP17.57■□□□□ 0.4
UBE3D-201ENST00000237186 SCYL3Q8IZE3 742 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 SCFD2Q8WU76 684 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 AS3MTQ9HBK9 375 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 LOXHD1Q8IVV2 1947 aa17.57■□□□□ 0.4
UBE3D-201ENST00000237186 BACH1O14867 736 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 MYCLP12524 364 aaPredicted RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 UGCGQ16739 394 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 EPC2Q52LR7 807 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 C1orf220Q5T0J3 134 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 NBPF12Q5TAG4 269 aaPredicted RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 ARHGEF16Q5VV41 709 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 MAEAQ7L5Y9 396 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 ZNF280CQ8ND82 737 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 HVCN1Q96D96 273 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 ATG4CQ96DT6 458 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 CALR3Q96L12 384 aaKnown RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 CBWD1Q9BRT8 395 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 HSPBP1Q9NZL4 362 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 NCANO14594 1321 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms