RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 AGPAT3Q9NRZ7 376 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 IGKV6-21A0A0C4DH24 114 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 FGFR1OPO95684 399 aaKnown RBP20.43■□□□□ 0.86
SNX17-201ENST00000233575 AKR1A1P14550 325 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 MIIPQ5JXC2 388 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 IFT74Q96LB3 600 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 CEP63Q96MT8 703 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 SRRDQ9UH36 339 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 ZNF215Q9UL58 517 aaPredicted RBP20.43■□□□□ 0.86
SNX17-201ENST00000233575 TBX20Q9UMR3 447 aa20.43■□□□□ 0.86
SNX17-201ENST00000233575 EVPLQ92817 2033 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 TPM3P06753 285 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 GJB1P08034 283 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 CASP4P49662 377 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 CACNB2Q08289 660 aaPredicted RBP20.42■□□□□ 0.86
SNX17-201ENST00000233575 ALCAMQ13740 583 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 FILIP1LQ4L180 1135 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 TAS1R3Q7RTX0 852 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 ACCSQ96QU6 501 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 ARHGAP28Q9P2N2 729 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 PPME1Q9Y570 386 aa20.42■□□□□ 0.86
SNX17-201ENST00000233575 MYADML2A6NDP7 307 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 CETN3O15182 167 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 AKAP3O75969 853 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 C22orf31O95567 290 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 PBX1P40424 430 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 CHMP4BP1P59074 171 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 PRPF31Q8WWY3 499 aaKnown RBP20.41■□□□□ 0.86
SNX17-201ENST00000233575 KAT2BQ92831 832 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 TSKSQ9UJT2 592 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 LRRIQ4A6NIV6 560 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 LGALS16A8MUM7 142 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 PES1O00541 588 aaKnown RBP20.41■□□□□ 0.86
SNX17-201ENST00000233575 CNGA1P29973 690 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 CLCN3P51790 818 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 CAPSQ13938 189 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 CCDC40Q4G0X9 1142 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 HS2ST1Q7LGA3 356 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 NOC4LQ9BVI4 516 aaKnown RBP20.41■□□□□ 0.86
SNX17-201ENST00000233575 TMEM206Q9H813 350 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 USP20Q9Y2K6 914 aa20.41■□□□□ 0.86
SNX17-201ENST00000233575 GOLGA6L6A8MZA4 724 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 NAMPTP43490 491 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 UBXN1Q04323 297 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 ZNF484Q5JVG2 852 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 CEP135Q66GS9 1140 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 EFCAB12Q6NXP0 572 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 MAP4K3Q8IVH8 894 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 METTL13Q8N6R0 699 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 SLC17A8Q8NDX2 589 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 ZNF296Q8WUU4 475 aaPredicted RBP20.4■□□□□ 0.86
SNX17-201ENST00000233575 AP5M1Q9H0R1 490 aa20.4■□□□□ 0.86
SNX17-201ENST00000233575 F2P00734 622 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 KLRC1P26715 233 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 CCND3P30281 292 aaPredicted RBP20.39■□□□□ 0.86
SNX17-201ENST00000233575 CYP2J2P51589 502 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 GOLGA8FQ08AF8 430 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 GOLGA8DPQ0D2H9 430 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 ZNF668Q96K58 619 aaPredicted RBP20.39■□□□□ 0.86
SNX17-201ENST00000233575 CBWD1Q9BRT8 395 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 KCNF1Q9H3M0 494 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 Q9Y3F1 56 aa20.39■□□□□ 0.86
SNX17-201ENST00000233575 DNAH12Q6ZR08 3092 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 ANKRD63C9JTQ0 380 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
SNX17-201ENST00000233575 PRKAR2AP13861 404 aaKnown RBP20.39■□□□□ 0.85
SNX17-201ENST00000233575 CPT1AP50416 773 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 PPFIA1Q13136 1202 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 NFIL3Q16649 462 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 IER5Q5VY09 327 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 SPECC1LQ69YQ0 1117 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 SLC39A4Q6P5W5 647 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 ZSWIM2Q8NEG5 633 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 PCIF1Q9H4Z3 704 aa20.39■□□□□ 0.85
SNX17-201ENST00000233575 SUCLA2Q9P2R7 463 aaPredicted RBP20.39■□□□□ 0.85
SNX17-201ENST00000233575 MYL3P08590 195 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 RPL13P26373 211 aaKnown RBP20.38■□□□□ 0.85
SNX17-201ENST00000233575 MARSP56192 900 aaKnown RBP20.38■□□□□ 0.85
SNX17-201ENST00000233575 LAMTOR4Q0VGL1 99 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 LRMPQ12912 555 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 GRIK4Q16099 956 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 FSCN1Q16658 493 aaKnown RBP20.38■□□□□ 0.85
SNX17-201ENST00000233575 MAN2A1Q16706 1144 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 KIAA0753Q2KHM9 967 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 VWA3BQ502W6 1294 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 MARCH8Q5T0T0 291 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 TRIM59Q8IWR1 403 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 DEPTORQ8TB45 409 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 CACTINQ8WUQ7 758 aaKnown RBP20.38■□□□□ 0.85
SNX17-201ENST00000233575 DMAC2Q9NW81 257 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.38■□□□□ 0.85
SNX17-201ENST00000233575 SIP14410 1827 aa20.38■□□□□ 0.85
SNX17-201ENST00000233575 SEPT4O43236 478 aa20.37■□□□□ 0.85
SNX17-201ENST00000233575 ADCY3O60266 1144 aa20.37■□□□□ 0.85
SNX17-201ENST00000233575 GNA14O95837 355 aa20.37■□□□□ 0.85
SNX17-201ENST00000233575 PGK1P00558 417 aa20.37■□□□□ 0.85
SNX17-201ENST00000233575 EDN1P05305 212 aa20.37■□□□□ 0.85
SNX17-201ENST00000233575 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
SNX17-201ENST00000233575 ADSSP30520 456 aa20.37■□□□□ 0.85
SNX17-201ENST00000233575 PPP2R5AQ15172 486 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms