RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ZNF131P52739 623 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 KCNJ2P63252 427 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 SATB1Q01826 763 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 SF3A3Q12874 501 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 SFR1Q86XK3 245 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 CTNNBL1Q8WYA6 563 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 PCDHA3Q9Y5H8 950 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 ASTN1O14525 1302 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 GPR75-ASB3A0A0A6YYF3 556 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 PPP1R12AO14974 1030 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 PHF2O75151 1096 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 EIF6P56537 245 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 ZNF211Q13398 564 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 MFSD5Q6N075 450 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 POTEGQ6S5H5 508 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 POTEEQ6S8J3 1075 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 THOC1Q96FV9 657 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 BORCS6Q96GS4 357 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 MTMR4Q9NYA4 1195 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 NOP53Q9NZM5 478 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 CNTNAP4Q9C0A0 1308 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 RPL13P26373 211 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 RFC4P35249 363 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 RPL21P46778 160 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 RHBDL3P58872 404 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 AUHQ13825 339 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 ARHGEF26Q96DR7 871 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 PCYOX1Q9UHG3 505 aa15.12■□□□□ 0.01
SCNN1A-201ENST00000228916 RIPK2O43353 540 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 HSPA6P17066 643 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 CHRNA3P32297 505 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 IFNAR2P48551 515 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 C18orf8Q96DM3 657 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 REEP2Q9BRK0 252 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 STK33Q9BYT3 514 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 GPCPD1Q9NPB8 672 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 MTRF1LQ9UGC7 380 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 PARP2Q9UGN5 583 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 USP15Q9Y4E8 981 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 ZNF831Q5JPB2 1677 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 PODXLO00592 558 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 ABCB4P21439 1286 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 TAOK1Q7L7X3 1001 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 ZNF804AQ7Z570 1209 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 ADGRF4Q8IZF3 695 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 PRELID2Q8N945 189 aa15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 SYT2Q8N9I0 419 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-201ENST00000228916 RASGRF2O14827 1237 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 STAT3P40763 770 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 BNIP1Q12981 228 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 PPP2R5AQ15172 486 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 BZW1Q7L1Q6 419 aaKnown RBP15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 RGL2O15211 777 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 ALAS1P13196 640 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 RARGP13631 454 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 CCND1P24385 295 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 HADHBP55084 474 aaKnown RBP15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 ZNF543Q08ER8 600 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 BARGINQ6ZT62 677 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 EXOC3L1Q86VI1 746 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 CATSPER3Q86XQ3 398 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 TBC1D16Q8TBP0 767 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 MBOAT7Q96N66 472 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 ZNF570Q96NI8 536 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 COG5Q9UP83 839 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 CYP3A7-CYP3A51PA0A087WV96 503 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 KRT13P13646 458 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 CYP3A7P24462 503 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 CTNNA2P26232 953 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 PSMC6P62333 389 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 SPIRE1Q08AE8 756 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 DRAP1Q14919 205 aaPredicted RBP15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 GPR88Q9GZN0 384 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 THAP2Q9H0W7 228 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 PSTPIP2Q9H939 334 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 TMOD4Q9NZQ9 345 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 CD2APQ9Y5K6 639 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 FRMPD4Q14CM0 1322 aa15.1■□□□□ 0.01
SCNN1A-201ENST00000228916 GOLGB1Q14789 3259 aaKnown RBP15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 ANKRD62A6NC57 917 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 GNPATO15228 680 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 FGFR4P22455 802 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 SLCO1A2P46721 670 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 COPS2P61201 443 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 ZNF568Q3ZCX4 644 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 TTC27Q6P3X3 843 aa15.09■□□□□ 0.01
SCNN1A-201ENST00000228916 ROPN1BQ9BZX4 212 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms