RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ISCUQ9H1K1 167 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 LAD1O00515 517 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 EVX2Q03828 476 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 CCDC6Q16204 474 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 MIIPQ5JXC2 388 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 ALKBH5Q6P6C2 394 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 GPC2Q8N158 579 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 ECT2Q9H8V3 914 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■■■ 96.1
CCND1-201ENST00000227507 ANAPC4Q9UJX5 808 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 C19orf81C9J6K1 198 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 TPD52L2O43399 206 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 SNUPNO95149 360 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 ACTN1P12814 892 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 RPL13P26373 211 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 RNF207Q6ZRF8 634 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 ZNF280CQ8ND82 737 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 CTNNBL1Q8WYA6 563 aaPredicted RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 PANK4Q9NVE7 773 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 DBR1Q9UK59 544 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 GINS2Q9Y248 185 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■□□ 18.8
CCND1-201ENST00000227507 FKBP1AP62942 108 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
CCND1-201ENST00000227507 ANKRD13AQ8IZ07 590 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 ZMYND12Q9H0C1 365 aa12.41□□□□□ -0.42
CCND1-201ENST00000227507 RGPD2P0DJD1 1756 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 POTEMA6NI47 508 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
CCND1-201ENST00000227507 NDUFB10O96000 172 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 ITIH3Q06033 890 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 MTMR2Q13614 643 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 UBE2SQ16763 222 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 CLEC10AQ8IUN9 316 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
CCND1-201ENST00000227507 TBK1Q9UHD2 729 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 DAAM1Q9Y4D1 1078 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 HSPA9P38646 679 aaKnown RBP12.4□□□□□ -0.42
CCND1-201ENST00000227507 KCNJ2P63252 427 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 SEC23AQ15436 765 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 QRICH1Q2TAL8 776 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 SLC17A8Q8NDX2 589 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 GLIS3Q8NEA6 775 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 FBF1Q8TES7 1133 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 RUBCNQ92622 972 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
CCND1-201ENST00000227507 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 KLRC4O43908 158 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 H2AFZP0C0S5 128 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 VPS41P49754 854 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 AP3B2Q13367 1082 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 THEMIS2Q5TEJ8 643 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 DNAJC14Q6Y2X3 702 aaPredicted RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 H2AFVQ71UI9 128 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 NEK9Q8TD19 979 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 LARP4BQ92615 738 aaKnown RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.43
CCND1-201ENST00000227507 RNF146Q9NTX7 359 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 AMFRQ9UKV5 643 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 TRPC6Q9Y210 931 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 COL4A3BPQ9Y5P4 624 aa12.4□□□□□ -0.43
CCND1-201ENST00000227507 UBOX5O94941 541 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 DESP17661 470 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 RANBP1P43487 201 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 ADAM9Q13443 819 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 NAB2Q15742 525 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 ZC3H12AQ5D1E8 599 aaKnown RBP12.39□□□□□ -0.43
CCND1-201ENST00000227507 APBB1IPQ7Z5R6 666 aaPredicted RBP12.39□□□□□ -0.43
CCND1-201ENST00000227507 FAM83AQ86UY5 434 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
CCND1-201ENST00000227507 ZNF577Q9BSK1 485 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 WDR11Q9BZH6 1224 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 TTYH3Q9C0H2 523 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 NEUROG2Q9H2A3 272 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 CNOT10Q9H9A5 744 aaKnown RBP12.39□□□□□ -0.43
CCND1-201ENST00000227507 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
CCND1-201ENST00000227507 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms