RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 SIX2Q9NPC8 291 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 FGFR1OP2Q9NVK5 253 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 DNAJC12Q9UKB3 198 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 TCRBV7S2A1N4TA0A589 114 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 ZBTB48P10074 688 aaPredicted RBP22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 VPS41P49754 854 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 TNIP1Q15025 636 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 ZBTB10Q96DT7 871 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 CTTNBP2NLQ9P2B4 639 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 DCCP43146 1447 aa22.3■■□□□ 1.16
PHOX2B-201ENST00000226382 TRAF1Q13077 416 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 MESDQ14696 234 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 TRIP13Q15645 432 aaPredicted RBP22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 WLSQ5T9L3 541 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 DPY19L2P1Q6NXN4 242 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 KLHL23Q8NBE8 558 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 HES6Q96HZ4 224 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 RAB17Q9H0T7 212 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 COG5Q9UP83 839 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 PCDHA1Q9Y5I3 950 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 GOLGA6L10A0A0M3HER8 536 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 ANKRD63C9JTQ0 380 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 XRCC4Q13426 336 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 RBBP5Q15291 538 aaKnown RBP22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 TPTE2Q6XPS3 522 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 KCNV2Q8TDN2 545 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 SLC20A1Q8WUM9 679 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 MXD3Q9BW11 206 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 ADAM7Q9H2U9 754 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 CTNNAL1Q9UBT7 734 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 TBK1Q9UHD2 729 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 DNM3Q9UQ16 869 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 STXBP5LQ9Y2K9 1186 aa22.29■■□□□ 1.16
PHOX2B-201ENST00000226382 PNMA6FA0A0J9YX94 578 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 PPIP5K2O43314 1243 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 HOXA13P31271 388 aaPredicted RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 RPL21P46778 160 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 KIAA1755Q5JYT7 1200 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 SYCE1Q8N0S2 351 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 SPICE1Q8N0Z3 855 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 C1orf131Q8NDD1 294 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 ZNF317Q96PQ6 595 aaPredicted RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 BZW2Q9Y6E2 419 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 ESYT2A0FGR8 921 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 C5orf60A6NFR6 353 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 RIMBP2O15034 1052 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 COQ9O75208 318 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 TBCAO75347 108 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 SLC12A3P55017 1021 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 MTA1Q13330 715 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 TLCD1Q96CP7 247 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 DDX23Q9BUQ8 820 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 PABPC3Q9H361 631 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 USP40Q9NVE5 1235 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 GGA2Q9UJY4 613 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 DLEC1Q9Y238 1755 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 TNFAIP3P21580 790 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 CTTNQ14247 550 aaKnown RBP22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 CLEC4GQ6UXB4 293 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 ARMCX6Q7L4S7 300 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 TRPM8Q7Z2W7 1104 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 CCDC105Q8IYK2 499 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 MICAL1Q8TDZ2 1067 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 PNMA3Q9UL41 463 aa22.28■■□□□ 1.16
PHOX2B-201ENST00000226382 A0A1B0GUA9 196 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 PPFIA2O75334 1257 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 PHLDB2Q86SQ0 1253 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 AGAP11Q8TF27 550 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 TCP11X1B4DZS4 312 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 SCNN1DP51172 638 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 CBWD6Q4V339 395 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 CBWD3Q5JTY5 395 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 CBWD5Q5RIA9 395 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 ZNF804AQ7Z570 1209 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 MYCT1Q8N699 235 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 ATXN2LQ8WWM7 1075 aaKnown RBP22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 KDM3AQ9Y4C1 1321 aa22.27■■□□□ 1.16
PHOX2B-201ENST00000226382 DDX3YO15523 660 aaKnown RBP22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 UBXN2AP68543 259 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 POU5F1Q01860 360 aaKnown RBP22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 C10orf76Q5T2E6 689 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 NUGGCQ68CJ6 796 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 DNAJC14Q6Y2X3 702 aaPredicted RBP22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 FAM186BQ8IYM0 893 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 RASGEF1CQ8N431 466 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 ADAM33Q9BZ11 813 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 ZDHHC18Q9NUE0 388 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 ASTN1O14525 1302 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 MGRN1O60291 552 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 DIAPH2O60879 1101 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 ANP32DO95626 131 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 CACNB3P54284 484 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 PTENP60484 403 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 KLRC3Q07444 240 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 ZNF543Q08ER8 600 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 EDRF1Q3B7T1 1238 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 DUPD1Q68J44 220 aa22.26■■□□□ 1.15
PHOX2B-201ENST00000226382 ZDHHC24Q6UX98 284 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms