RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SLC39A2Q9NP94 309 aa15.51■□□□□ 0.07
SEC61B-201ENST00000223641 GDAQ9Y2T3 454 aa15.51■□□□□ 0.07
SEC61B-201ENST00000223641 SIP14410 1827 aa15.51■□□□□ 0.07
SEC61B-201ENST00000223641 PPP1R3GB7ZBB8 358 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 RPLP2P05387 115 aaKnown RBP15.5■□□□□ 0.07
SEC61B-201ENST00000223641 SCP2P22307 547 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 CASP5P51878 434 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 GTF2BQ00403 316 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 CDC42EP1Q00587 391 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 DMP1Q13316 513 aaPredicted RBP15.5■□□□□ 0.07
SEC61B-201ENST00000223641 CAPSQ13938 189 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 SNX17Q15036 470 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 STX1AQ16623 288 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 BMT2Q1RMZ1 405 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 DPCR1Q3MIW9 517 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 CT47A1Q5JQC4 288 aaPredicted RBP15.5■□□□□ 0.07
SEC61B-201ENST00000223641 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
SEC61B-201ENST00000223641 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 NME8Q8N427 588 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 GUF1Q8N442 669 aaKnown RBP15.5■□□□□ 0.07
SEC61B-201ENST00000223641 TMEM161BQ8NDZ6 487 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 GLIS3Q8NEA6 775 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 ZNF507Q8TCN5 953 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 IFT74Q96LB3 600 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 NFKBIZQ9BYH8 718 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 MRPL44Q9H9J2 332 aaKnown RBP15.5■□□□□ 0.07
SEC61B-201ENST00000223641 ANO10Q9NW15 660 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 ARHGAP28Q9P2N2 729 aa15.5■□□□□ 0.07
SEC61B-201ENST00000223641 KIAA0100Q14667 2235 aaKnown RBP15.49■□□□□ 0.07
SEC61B-201ENST00000223641 ADGRA3Q8IWK6 1321 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 EIF3DO15371 548 aaKnown RBP eCLIP15.49■□□□□ 0.071e-5■□□□□ 8.6
SEC61B-201ENST00000223641 CD4P01730 458 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 CD44P16070 742 aaKnown RBP15.49■□□□□ 0.07
SEC61B-201ENST00000223641 NMT1P30419 496 aaKnown RBP15.49■□□□□ 0.07
SEC61B-201ENST00000223641 PPP1R2P41236 205 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 PRCPP42785 496 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 SMTNP53814 917 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 PTK7Q13308 1070 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 ALCAMQ13740 583 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 PTGISQ16647 500 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 CDCA2Q69YH5 1023 aaPredicted RBP15.49■□□□□ 0.07
SEC61B-201ENST00000223641 SLC39A5Q6ZMH5 540 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 HAUS6Q7Z4H7 955 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 RHPN2Q8IUC4 686 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 SMYD4Q8IYR2 804 aaPredicted RBP15.49■□□□□ 0.07
SEC61B-201ENST00000223641 ADSSL1Q8N142 457 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 SCFD1Q8WVM8 642 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 MAP7D2Q96T17 732 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 SENP6Q9GZR1 1112 aaPredicted RBP15.49■□□□□ 0.07
SEC61B-201ENST00000223641 KMT5AQ9NQR1 393 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 TBC1D7Q9P0N9 293 aa15.49■□□□□ 0.07
SEC61B-201ENST00000223641 H0YCG3 227 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 B4GALT4O60513 344 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 GPR32O75388 356 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 VTNP04004 478 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 MYBP10242 640 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 ABCD1P33897 745 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 HOXD13P35453 343 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 GPC3P51654 580 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 PTENP60484 403 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 TRIM71Q2Q1W2 868 aaKnown RBP15.48■□□□□ 0.07
SEC61B-201ENST00000223641 ANKRD33Q7Z3H0 272 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 UBE2Q1Q7Z7E8 422 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 ZNF410Q86VK4 478 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 DIS3LQ8TF46 1054 aaKnown RBP15.48■□□□□ 0.07
SEC61B-201ENST00000223641 WNT8BQ93098 351 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 ADAMTS10Q9H324 1103 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 TMEM134Q9H6X4 195 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 IFT122Q9HBG6 1241 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 TRMT13Q9NUP7 481 aaKnown RBP15.48■□□□□ 0.07
SEC61B-201ENST00000223641 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
SEC61B-201ENST00000223641 UBE4BO95155 1302 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 CCDC169A6NNP5 214 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 SLC16A4O15374 487 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 GCNT3O95395 438 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 NLRP11P59045 1033 aaKnown RBP15.47■□□□□ 0.07
SEC61B-201ENST00000223641 RBL2Q08999 1139 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 TFDP1Q14186 410 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 ZC2HC1CQ53FD0 456 aaPredicted RBP15.47■□□□□ 0.07
SEC61B-201ENST00000223641 FOXR2Q6PJQ5 311 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 TAS1R3Q7RTX0 852 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 MYOCDQ8IZQ8 938 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 RNF149Q8NC42 400 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 DHX38Q92620 1227 aaKnown RBP15.47■□□□□ 0.07
SEC61B-201ENST00000223641 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
SEC61B-201ENST00000223641 PAWRQ96IZ0 340 aaKnown RBP15.47■□□□□ 0.07
SEC61B-201ENST00000223641 TOX2Q96NM4 488 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 BPIFA3Q9BQP9 254 aa15.47■□□□□ 0.07
SEC61B-201ENST00000223641 FAM49AQ9H0Q0 323 aaPredicted RBP15.47■□□□□ 0.07
SEC61B-201ENST00000223641 A0A087WZ62 844 aa15.46■□□□□ 0.07
SEC61B-201ENST00000223641 LRRIQ4A6NIV6 560 aa15.46■□□□□ 0.07
SEC61B-201ENST00000223641 K7ENM7 598 aa15.46■□□□□ 0.07
SEC61B-201ENST00000223641 CAND2O75155 1236 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms