RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CCDC169A6NNP5 214 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 GAP43P17677 238 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 NLRP11P59045 1033 aaKnown RBP30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 RNF149Q8NC42 400 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 NLRP7Q8WX94 980 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 NPTX2P47972 431 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 GPC3P51654 580 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 MRPS6P82932 125 aaKnown RBP30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 NME8Q8N427 588 aa30.11■■■□□ 2.41
CHMP4B-201ENST00000217402 NAMPTP43490 491 aa30.1■■■□□ 2.41
CHMP4B-201ENST00000217402 PPP2R5AQ15172 486 aa30.1■■■□□ 2.41
CHMP4B-201ENST00000217402 CCDC47Q96A33 483 aaKnown RBP30.1■■■□□ 2.41
CHMP4B-201ENST00000217402 C17orf75Q9HAS0 396 aa30.1■■■□□ 2.41
CHMP4B-201ENST00000217402 KIAA1468Q9P260 1216 aa30.1■■■□□ 2.41
CHMP4B-201ENST00000217402 A0A087WZ62 844 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 M0QZ92 97 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 ASAP2O43150 1006 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 CLTBP09497 229 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 TFDP1Q14186 410 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 RPAINQ86UA6 219 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 FAM178BQ8IXR5 827 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 SPATA20Q8TB22 786 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 FDXACB1Q9BRP7 624 aaPredicted RBP30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 KMT5AQ9NQR1 393 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 CDY2AQ9Y6F7 541 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 MYH11P35749 1972 aa30.09■■■□□ 2.41
CHMP4B-201ENST00000217402 BIN1O00499 593 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 SLC16A4O15374 487 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 GPR32O75388 356 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 RPLP2P05387 115 aaKnown RBP30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 CKBP12277 381 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 CCDC155Q8N6L0 562 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 DEPTORQ8TB45 409 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 CAGE1Q8TC20 777 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 GSDMAQ96QA5 445 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 ADAMTS10Q9H324 1103 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 MRPL44Q9H9J2 332 aaKnown RBP30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 CDHR5Q9HBB8 845 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 TMEM39AQ9NV64 488 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 SEL1LQ9UBV2 794 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 ADGRA3Q8IWK6 1321 aa30.08■■■□□ 2.41
CHMP4B-201ENST00000217402 K7ENM7 598 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 FAM26FQ5R3K3 315 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 ZNF618Q5T7W0 954 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 ISM2Q6H9L7 571 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 OSMRQ99650 979 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 FGFBP2Q9BYJ0 223 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 PRDM5Q9NQX1 630 aaPredicted RBP30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 TRPV2Q9Y5S1 764 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 RBAK-RBAKDNI3L0D1 243 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 NMT1P30419 496 aaKnown RBP30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 SARSP49591 514 aaKnown RBP30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 SMTNP53814 917 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 EHHADHQ08426 723 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 BFSP2Q13515 415 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 ZNF410Q86VK4 478 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 FIZ1Q96SL8 496 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 CELF4Q9BZC1 486 aaKnown RBP30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 PPP1R12CQ9BZL4 782 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 HIPK3Q9H422 1215 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 OLFML3Q9NRN5 406 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 RMND1Q9NWS8 449 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 MAN1B1Q9UKM7 699 aa30.07■■■□□ 2.4
CHMP4B-201ENST00000217402 CAND2O75155 1236 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 RHOBTB3O94955 611 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 CHRNA1P02708 482 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 KCNB1Q14721 858 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 NT5DC1Q5TFE4 455 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 SPIRE2Q8WWL2 714 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 NOC4LQ9BVI4 516 aaKnown RBP30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 IFT122Q9HBG6 1241 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 SLC39A2Q9NP94 309 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 TBX21Q9UL17 535 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 UMODL1Q5DID0 1318 aa30.06■■■□□ 2.4
CHMP4B-201ENST00000217402 PHKA2P46019 1235 aa30.05■■■□□ 2.4
CHMP4B-201ENST00000217402 NCKAP1LP55160 1127 aa30.05■■■□□ 2.4
CHMP4B-201ENST00000217402 CDC42EP1Q00587 391 aa30.05■■■□□ 2.4
CHMP4B-201ENST00000217402 MGAT3Q09327 533 aa30.05■■■□□ 2.4
CHMP4B-201ENST00000217402 GLIS3Q8NEA6 775 aa30.05■■■□□ 2.4
CHMP4B-201ENST00000217402 CSDE1O75534 798 aaKnown RBP30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 GCNT3O95395 438 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 CASP5P51878 434 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 RBL2Q08999 1139 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 RBM43Q6ZSC3 357 aaKnown RBP30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 HTATIP2Q9BUP3 242 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 ALPK3Q96L96 1907 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 MYBP10242 640 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 CRYBB1P53674 252 aaPredicted RBP30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 PTENP60484 403 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 STK4Q13043 487 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 CDCA2Q69YH5 1023 aaPredicted RBP30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 LRRC8DQ7L1W4 858 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 HAUS6Q7Z4H7 955 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 ZBTB8OSQ8IWT0 167 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 TMEM161BQ8NDZ6 487 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 TMEM40Q8WWA1 233 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 NTPCRQ9BSD7 190 aaKnown RBP30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 GCOM2Q9BZD3 368 aaPredicted RBP30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 ARHGAP28Q9P2N2 729 aa30.04■■■□□ 2.4
CHMP4B-201ENST00000217402 GDAQ9Y2T3 454 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms