RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DGAT1O75907 488 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 SUPT20HL2P0C7V6 817 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 SP2Q02086 613 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 ARID5AQ03989 594 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 TMEM161BQ8NDZ6 487 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 CLMNQ96JQ2 1002 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 PUF60Q9UHX1 559 aaKnown RBP32.4■■■□□ 2.78
PABPN1-201ENST00000216727 IGSF9BQ9UPX0 1349 aa32.4■■■□□ 2.78
PABPN1-201ENST00000216727 KRT13P13646 458 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 NPTX2P47972 431 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 RTP1P59025 263 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 RNF10Q8N5U6 811 aaKnown RBP32.39■■■□□ 2.78
PABPN1-201ENST00000216727 XXYLT1Q8NBI6 393 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 MCPH1Q8NEM0 835 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 JRKLQ9Y4A0 524 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 DOCK5Q9H7D0 1870 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 ARID2Q68CP9 1835 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 ATG7O95352 703 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 EDNRBP24530 442 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 CBWD6Q4V339 395 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 CBWD3Q5JTY5 395 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 CBWD5Q5RIA9 395 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 CBWD1Q9BRT8 395 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 ARGLU1Q9NWB6 273 aaPredicted RBP32.39■■■□□ 2.78
PABPN1-201ENST00000216727 TELO2Q9Y4R8 837 aa32.39■■■□□ 2.78
PABPN1-201ENST00000216727 MCCD1P59942 119 aaPredicted RBP32.38■■■□□ 2.77
PABPN1-201ENST00000216727 PRKCEQ02156 737 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 PPIL2Q13356 520 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 IQCEQ6IPM2 695 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 MAP4K3Q8IVH8 894 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 ASCC2Q9H1I8 757 aaPredicted RBP32.38■■■□□ 2.77
PABPN1-201ENST00000216727 HSPBP1Q9NZL4 362 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 TBX20Q9UMR3 447 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 AGTPBP1Q9UPW5 1226 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 A0A087X0T9 212 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 CTAGE15A4D2H0 777 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 PEX10O60683 326 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 FAM228BP0C875 321 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 CTAGE8P0CG41 777 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 TRIM49P0CI25 452 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 TRIM49CP0CI26 452 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 EPHX2P34913 555 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 PTK2Q05397 1052 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 XKR3Q5GH77 459 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 CTAGE6Q86UF2 777 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 CTAGE4Q8IX94 777 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 MLXIPQ9HAP2 919 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 CYP26B1Q9NR63 512 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 HDAC6Q9UBN7 1215 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 CAPN6Q9Y6Q1 641 aa32.38■■■□□ 2.77
PABPN1-201ENST00000216727 TISP43B9A030 160 aa32.37■■■□□ 2.77
PABPN1-201ENST00000216727 POTEB2H3BUK9 544 aa32.37■■■□□ 2.77
PABPN1-201ENST00000216727 C10orf76Q5T2E6 689 aa32.37■■■□□ 2.77
PABPN1-201ENST00000216727 ALS2CR12Q96Q35 445 aa32.37■■■□□ 2.77
PABPN1-201ENST00000216727 PCIF1Q9H4Z3 704 aa32.37■■■□□ 2.77
PABPN1-201ENST00000216727 ADAMTS1Q9UHI8 967 aa32.37■■■□□ 2.77
PABPN1-201ENST00000216727 CCDC169A6NNP5 214 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 MYL7Q01449 175 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 SP4Q02446 784 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 FSTL1Q12841 308 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.36■■■□□ 2.77
PABPN1-201ENST00000216727 NCAPG2Q86XI2 1143 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 RDH13Q8NBN7 331 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 KMT5AQ9NQR1 393 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 AJAP1Q9UKB5 411 aaPredicted RBP32.36■■■□□ 2.77
PABPN1-201ENST00000216727 P4HA2O15460 535 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 CYFIP1Q7L576 1253 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP32.36■■■□□ 2.77
PABPN1-201ENST00000216727 STK33Q9BYT3 514 aa32.36■■■□□ 2.77
PABPN1-201ENST00000216727 SEPT9Q9UHD8 586 aaPredicted RBP32.36■■■□□ 2.77
PABPN1-201ENST00000216727 MAFBQ9Y5Q3 323 aaPredicted RBP32.36■■■□□ 2.77
PABPN1-201ENST00000216727 CNMDO75829 334 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 SLC25A27O95847 323 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 CLCN6P51797 869 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 VAMP7P51809 220 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 MOB2Q70IA6 237 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 ZNF571Q7Z3V5 609 aaPredicted RBP32.35■■■□□ 2.77
PABPN1-201ENST00000216727 ATP6V0A4Q9HBG4 840 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 SYNGAP1Q96PV0 1343 aa32.35■■■□□ 2.77
PABPN1-201ENST00000216727 SOWAHBA6NEL2 793 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 N4BP1O75113 896 aaKnown RBP32.34■■■□□ 2.77
PABPN1-201ENST00000216727 MOCS3O95396 460 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 TFRCP02786 760 aaKnown RBP32.34■■■□□ 2.77
PABPN1-201ENST00000216727 ZSCAN20P17040 1043 aaPredicted RBP32.34■■■□□ 2.77
PABPN1-201ENST00000216727 FMNL3Q8IVF7 1028 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 BSNDQ8WZ55 320 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 NOX5Q96PH1 765 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 INTS2Q9H0H0 1204 aaKnown RBP32.34■■■□□ 2.77
PABPN1-201ENST00000216727 XPNPEP1Q9NQW7 623 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 FERP16591 822 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 RFX1P22670 979 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 STAT1P42224 750 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 TTLL12Q14166 644 aaPredicted RBP32.34■■■□□ 2.77
PABPN1-201ENST00000216727 GJB7Q6PEY0 223 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 SEPT14Q6ZU15 432 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 SALL4Q9UJQ4 1053 aa32.34■■■□□ 2.77
PABPN1-201ENST00000216727 DENND3A2RUS2 1198 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 PRLRP16471 622 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 COPB2P35606 906 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 PAGR1Q9BTK6 254 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms