RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 ITGB1P05556 798 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 VSIG10L2P0DP72 767 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 NR4A1P22736 598 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 CC2D1AQ6P1N0 951 aaPredicted RBP4.23□□□□□ -1.73
CDKN3-201ENST00000216414 LRRC55Q6ZSA7 311 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 RHOUQ7L0Q8 258 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 IGSF22Q8N9C0 903 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 SLC7A14Q8TBB6 771 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 CPT1CQ8TCG5 803 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 NKD2Q969F2 451 aaPredicted RBP4.23□□□□□ -1.73
CDKN3-201ENST00000216414 ZNF764Q96H86 408 aaPredicted RBP4.23□□□□□ -1.73
CDKN3-201ENST00000216414 DYDC2Q96IM9 177 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
CDKN3-201ENST00000216414 UBA6A0AVT1 1052 aaPredicted RBP4.22□□□□□ -1.73
CDKN3-201ENST00000216414 ZAR1LA6NP61 321 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 JUNP05412 331 aaKnown RBP4.22□□□□□ -1.73
CDKN3-201ENST00000216414 GNAT2P19087 354 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 HK1P19367 917 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 FNTBP49356 437 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 KIF11P52732 1056 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 NPEPPSP55786 919 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 TMEM177Q53S58 311 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 HECTD2Q5U5R9 776 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 PRAMEF9Q5VWM5 478 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 C1QL3Q5VWW1 255 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 SLFN12LQ6IEE8 588 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 HTR3DQ70Z44 454 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 CLEC14AQ86T13 490 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 CMTM4Q8IZR5 234 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 GSTCDQ8NEC7 633 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 MDGA1Q8NFP4 955 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 THAP3Q8WTV1 239 aaPredicted RBP4.22□□□□□ -1.73
CDKN3-201ENST00000216414 MAML3Q96JK9 1138 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 FAM193BQ96PV7 902 aaPredicted RBP4.22□□□□□ -1.73
CDKN3-201ENST00000216414 BOCQ9BWV1 1114 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 SFMBT1Q9UHJ3 866 aa4.22□□□□□ -1.73
CDKN3-201ENST00000216414 GRID2IPA4D2P6 1211 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 KRTAP29-1A8MX34 341 aaPredicted RBP4.21□□□□□ -1.74
CDKN3-201ENST00000216414 B3GALT2O43825 422 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 PPFIA4O75335 1185 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 SCAF4O95104 1147 aaKnown RBP4.21□□□□□ -1.74
CDKN3-201ENST00000216414 ZBTB48P10074 688 aaPredicted RBP4.21□□□□□ -1.74
CDKN3-201ENST00000216414 HNRNPLP14866 589 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDKN3-201ENST00000216414 LONRF2Q1L5Z9 754 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 TIGD2Q4W5G0 525 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 STRIP1Q5VSL9 837 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 ABHD17CQ6PCB6 329 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 ST8SIA2Q92186 375 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 SCLYQ96I15 445 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 TUBGCP5Q96RT8 1024 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 PCIF1Q9H4Z3 704 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 C14orf93Q9H972 538 aaKnown RBP4.21□□□□□ -1.74
CDKN3-201ENST00000216414 CYP4F11Q9HBI6 524 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 ADARB2Q9NS39 739 aaKnown RBP4.21□□□□□ -1.74
CDKN3-201ENST00000216414 KCMF1Q9P0J7 381 aa4.21□□□□□ -1.74
CDKN3-201ENST00000216414 GRXCR1A8MXD5 290 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 STC2O76061 302 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 RECQL4O94761 1208 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 NPTXRO95502 500 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 C21orf58P58505 322 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 SPIDRQ14159 915 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 PLEKHG4Q58EX7 1191 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 TTC38Q5R3I4 469 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 ZKSCAN2Q63HK3 967 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 SYCE2Q6PIF2 218 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 BHLHA9Q7RTU4 235 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 BRAPQ7Z569 592 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 GLCCI1Q86VQ1 547 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 PRIMA1Q86XR5 153 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 ADGRG3Q86Y34 549 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 BEND2Q8NDZ0 799 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 RPGRQ92834 1020 aaKnown RBP4.2□□□□□ -1.74
CDKN3-201ENST00000216414 EPC1Q9H2F5 836 aa4.2□□□□□ -1.74
CDKN3-201ENST00000216414 TCRBV16S1A1N1A0A5B0 115 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 ERBB2P04626 1255 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 ZNF37AP17032 561 aaPredicted RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 KCNA6P17658 529 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 LAG3P18627 525 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 KIR2DL3P43628 341 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 KRTAP10-11P60412 298 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 ARHGAP44Q17R89 818 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 FAM214AQ32MH5 1076 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 TRIM61Q5EBN2 209 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 DCAF17Q5H9S7 520 aaPredicted RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 ZC3H12BQ5HYM0 836 aaKnown RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 NBPF6Q5VWK0 638 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 NAIF1Q69YI7 327 aaPredicted RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 OLFML1Q6UWY5 402 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 OTOP1Q7RTM1 612 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 APBB1IPQ7Z5R6 666 aaPredicted RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 BMP8AQ7Z5Y6 402 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 FGD2Q7Z6J4 655 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 CXorf67Q86X51 503 aaPredicted RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 NBPF4Q96M43 638 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 BBC3Q96PG8 261 aaPredicted RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 TOR3AQ9H497 397 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 ZNF768Q9H5H4 540 aaKnown RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 EIF2B4Q9UI10 523 aaKnown RBP4.19□□□□□ -1.74
CDKN3-201ENST00000216414 SYNPO2Q9UMS6 1093 aa4.19□□□□□ -1.74
CDKN3-201ENST00000216414 HS3ST4Q9Y661 456 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms