RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 EP400NLQ6ZTU2 488 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 AGBL3Q8NEM8 1001 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 CASKIN2Q8WXE0 1202 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 LRRC37BQ96QE4 947 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 PHF20Q9BVI0 1012 aa12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 CELF4Q9BZC1 486 aaKnown RBP12.4□□□□□ -0.43
DNMT3B-201ENST00000201963 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 RASA4BC9J798 803 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 PODXLO00592 558 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 MAP3K7O43318 606 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 RASA4O43374 803 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 ABL1P00519 1130 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 ASNSP08243 561 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 SETSIPP0DME0 302 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 SERPINB6P35237 376 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 MYL7Q01449 175 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 MAK16Q9BXY0 300 aaKnown RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 STOML1Q9UBI4 398 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 PLAGL2Q9UPG8 496 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 PVALEFA0A1B0GWK0 134 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 GLI1P08151 1106 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 ESRRAP11474 423 aaPredicted RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 SCTRP47872 440 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 ERFP50548 548 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 EEPD1Q7L9B9 569 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 DPP9Q86TI2 863 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 GSDMBQ8TAX9 411 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 PSMC2P35998 433 aaKnown RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 CDK8P49336 464 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 RCAN1P53805 252 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 CASP7P55210 303 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 PDE1CQ14123 709 aaPredicted RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 UBE2SQ16763 222 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 MOB2Q70IA6 237 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 LONP2Q86WA8 852 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 ABTB1Q969K4 478 aaPredicted RBP12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
DNMT3B-201ENST00000201963 A0A0G2JND7 137 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 PAX7P23759 505 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 RPS12P25398 132 aaKnown RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 LRIG3Q6UXM1 1119 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 GINS2Q9Y248 185 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 PHRF1Q9P1Y6 1649 aaKnown RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 NFKBIEO00221 500 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 MYBL2P10244 700 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 DLK2Q6UY11 383 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 GIMAP8Q8ND71 665 aaPredicted RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 GBA2Q9HCG7 927 aaPredicted RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 DBR1Q9UK59 544 aaKnown RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 MAPK4P31152 587 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 PHBP35232 272 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 TAF1CQ15572 869 aaPredicted RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 USP38Q8NB14 1042 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 ZBTB10Q96DT7 871 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 FERMT1Q9BQL6 677 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 DCP1AQ9NPI6 582 aaPredicted RBP12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 FGFR1OP2Q9NVK5 253 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 RABGAP1Q9Y3P9 1069 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
DNMT3B-201ENST00000201963 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 WNT10BO00744 389 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 GYG2O15488 501 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 RANBP1P43487 201 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 ITIH3Q06033 890 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 EDEM3Q9BZQ6 932 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 CCSER1Q9C0I3 900 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 UBE2TQ9NPD8 197 aaPredicted RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 SFI1A8K8P3 1242 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 GAS7O60861 476 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 ANP32DO95626 131 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms