RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 KIAA0825Q8IV33 1275 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 LNX1Q8TBB1 728 aaPredicted RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 ATG4AQ8WYN0 398 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 DHX36Q9H2U1 1008 aaKnown RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 MYH7BA7E2Y1 1941 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 ARSHQ5FYA8 562 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 KIAA1755Q5JYT7 1200 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 LRIG3Q6UXM1 1119 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 ERP44Q9BS26 406 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 HEMGNQ9BXL5 484 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 DLATP10515 647 aaKnown RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 GCFC2P16383 781 aaKnown RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 ALDH5A1P51649 535 aaPredicted RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 SRRM1Q8IYB3 904 aaKnown RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 FAM186BQ8IYM0 893 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 PROM2Q8N271 834 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 FAM129AQ9BZQ8 928 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 CCDC169A6NNP5 214 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 LGR5O75473 907 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 SLC8A1P32418 973 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 RPL21P46778 160 aaKnown RBP18.08■□□□□ 0.49
CTDP1-201ENST00000075430 ZCWPW2Q504Y3 356 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 DCAF12L1Q5VU92 463 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 YTHDF3Q7Z739 585 aaKnown RBP18.08■□□□□ 0.49
CTDP1-201ENST00000075430 KIF9Q9HAQ2 790 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.08■□□□□ 0.492e-6■■■■□ 21.7
CTDP1-201ENST00000075430 ALG6Q9Y672 507 aa18.08■□□□□ 0.49
CTDP1-201ENST00000075430 CCDC188H7C350 402 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 EXOC3O60645 756 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 FXR2P51116 673 aaKnown RBP eCLIP18.08■□□□□ 0.48
CTDP1-201ENST00000075430 PSMD2Q13200 908 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 GRIPAP1Q4V328 841 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 CCDC137Q6PK04 289 aaKnown RBP18.08■□□□□ 0.48
CTDP1-201ENST00000075430 ACTRT1Q8TDG2 376 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 ARHGEF2Q92974 986 aaKnown RBP18.08■□□□□ 0.48
CTDP1-201ENST00000075430 KCNQ5Q9NR82 932 aa18.08■□□□□ 0.48
CTDP1-201ENST00000075430 MTRF1LQ9UGC7 380 aaKnown RBP18.08■□□□□ 0.48
CTDP1-201ENST00000075430 SPAG7O75391 227 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 KYNUQ16719 465 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 ERICH1Q86X53 443 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 NEDD1Q8NHV4 660 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 LZTS2Q9BRK4 669 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 UBE2TQ9NPD8 197 aaPredicted RBP18.07■□□□□ 0.48
CTDP1-201ENST00000075430 COL4A1P02462 1669 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 GOLGA8IPA6NC78 632 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 GOLGA8JA6NMD2 632 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 EAPPQ56P03 285 aaPredicted RBP18.07■□□□□ 0.48
CTDP1-201ENST00000075430 ERMARDQ5T6L9 678 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 RBM26Q5T8P6 1007 aaKnown RBP18.07■□□□□ 0.48
CTDP1-201ENST00000075430 SLC30A5Q8TAD4 765 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 DBNDD1Q9H9R9 158 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 WDR91A4D1P6 747 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 RBAK-RBAKDNI3L0D1 243 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 GNA14O95837 355 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 FTLP02792 175 aaPredicted RBP18.07■□□□□ 0.48
CTDP1-201ENST00000075430 KAT5Q92993 513 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 NT5C3AQ9H0P0 336 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 KCTD10Q9H3F6 313 aa18.07■□□□□ 0.48
CTDP1-201ENST00000075430 CICQ96RK0 1608 aaPredicted RBP18.06■□□□□ 0.48
CTDP1-201ENST00000075430 TMEM120BA0PK00 339 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 TM4SF1P30408 202 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 STX2P32856 288 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 CALCOCO2Q13137 446 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 VSIG1Q86XK7 387 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 SYCE1Q8N0S2 351 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 CCDC127Q96BQ5 260 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 CEP63Q96MT8 703 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 TMEM237Q96Q45 408 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 FOXN3O00409 490 aaPredicted RBP18.06■□□□□ 0.48
CTDP1-201ENST00000075430 RFX8Q6ZV50 586 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 RUBCNQ92622 972 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
CTDP1-201ENST00000075430 C9orf72Q96LT7 481 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 RASAL2Q9UJF2 1139 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 A0A1W2PRG0 241 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 KRT16P08779 473 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 GCLMP48507 274 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 CCNHP51946 323 aaPredicted RBP18.06■□□□□ 0.48
CTDP1-201ENST00000075430 AGBL2Q5U5Z8 902 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 POLLQ9UGP5 575 aa18.06■□□□□ 0.48
CTDP1-201ENST00000075430 CALUO43852 315 aaPredicted RBP18.05■□□□□ 0.48
CTDP1-201ENST00000075430 ZYXQ15942 572 aaKnown RBP18.05■□□□□ 0.48
CTDP1-201ENST00000075430 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 CCDC50Q8IVM0 306 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 PABPC3Q9H361 631 aaKnown RBP18.05■□□□□ 0.48
CTDP1-201ENST00000075430 ARHGEF10LQ9HCE6 1279 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 TMEM59LQ9UK28 342 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 MYH1P12882 1939 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 MYH4Q9Y623 1939 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 SLC35C1Q96A29 364 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 ANO3Q9BYT9 981 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 EDEM3Q9BZQ6 932 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 ETNK1Q9HBU6 452 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 COG5Q9UP83 839 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 GIT2Q14161 759 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms