RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
HOXC8-201ENST00000040584 KIFAP3Q92845 792 aa24.22■■□□□ 1.47
HOXC8-201ENST00000040584 TMEM143Q96AN5 459 aa24.22■■□□□ 1.47
HOXC8-201ENST00000040584 BICDL2A1A5D9 508 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 CPT1AP50416 773 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 PEX3P56589 373 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 ZC2HC1CQ53FD0 456 aaPredicted RBP24.21■■□□□ 1.47
HOXC8-201ENST00000040584 SPECC1LQ69YQ0 1117 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 POLR3FQ9H1D9 316 aaPredicted RBP24.21■■□□□ 1.47
HOXC8-201ENST00000040584 WBP1LQ9NX94 342 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 STX10O60499 249 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 ETF1P62495 437 aaKnown RBP24.21■■□□□ 1.47
HOXC8-201ENST00000040584 TBC1D8BQ0IIM8 1120 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 PXYLP1Q8TE99 480 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 BSNDQ8WZ55 320 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 DUSP9Q99956 384 aaKnown RBP24.21■■□□□ 1.47
HOXC8-201ENST00000040584 SRRTQ9BXP5 876 aaKnown RBP24.21■■□□□ 1.47
HOXC8-201ENST00000040584 TRIM17Q9Y577 477 aa24.21■■□□□ 1.47
HOXC8-201ENST00000040584 MAFO75444 373 aaPredicted RBP24.2■■□□□ 1.46
HOXC8-201ENST00000040584 INSRRP14616 1297 aa24.2■■□□□ 1.46
HOXC8-201ENST00000040584 HOXD13P35453 343 aa24.2■■□□□ 1.46
HOXC8-201ENST00000040584 FSCN1Q16658 493 aaKnown RBP24.2■■□□□ 1.46
HOXC8-201ENST00000040584 BRDTQ58F21 947 aaPredicted RBP24.2■■□□□ 1.46
HOXC8-201ENST00000040584 FOXR2Q6PJQ5 311 aa24.2■■□□□ 1.46
HOXC8-201ENST00000040584 CTAGE1Q96RT6 745 aa24.2■■□□□ 1.46
HOXC8-201ENST00000040584 PPME1Q9Y570 386 aa24.2■■□□□ 1.46
HOXC8-201ENST00000040584 MYADML2A6NDP7 307 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 KIF20AO95235 890 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 C6orf222P0C671 652 aaPredicted RBP24.19■■□□□ 1.46
HOXC8-201ENST00000040584 IGBP1P78318 339 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 KCNA1Q09470 495 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 KSR1Q8IVT5 923 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 ZNF507Q8TCN5 953 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 ZBTB10Q96DT7 871 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 K7ENM7 598 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 PGK1P00558 417 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 MYL3P08590 195 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 RARBP10826 455 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 PRKCSHP14314 528 aaPredicted RBP24.19■■□□□ 1.46
HOXC8-201ENST00000040584 CHMP4BP1P59074 171 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 LRRC63Q05C16 580 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 BMT2Q1RMZ1 405 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 ZCWPW2Q504Y3 356 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 MAP3K21Q5TCX8 1036 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 DNAJC5GQ8N7S2 189 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 KAT2BQ92831 832 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 EEF2KMTQ96G04 330 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 KCTD10Q9H3F6 313 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 SUGCTQ9HAC7 445 aa24.19■■□□□ 1.46
HOXC8-201ENST00000040584 CCDC169A6NNP5 214 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 EIF3DO15371 548 aaKnown RBP eCLIP24.18■■□□□ 1.46
HOXC8-201ENST00000040584 SLC16A4O15374 487 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 F2P00734 622 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 NPTX2P47972 431 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 PRMT2P55345 433 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 GJA9P57773 515 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 DMP1Q13316 513 aaPredicted RBP24.18■■□□□ 1.46
HOXC8-201ENST00000040584 DRP2Q13474 957 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 ZNF484Q5JVG2 852 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 ZNF397Q8NF99 534 aaPredicted RBP24.18■■□□□ 1.46
HOXC8-201ENST00000040584 KIFC3Q9BVG8 833 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 OGFRQ9NZT2 677 aa24.18■■□□□ 1.46
HOXC8-201ENST00000040584 MAPTP10636 758 aaKnown RBP24.17■■□□□ 1.46
HOXC8-201ENST00000040584 ARL2P36404 184 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 NR1I3Q14994 352 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 KNOP1Q1ED39 458 aaKnown RBP24.17■■□□□ 1.46
HOXC8-201ENST00000040584 IRF2BP1Q8IU81 584 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 CSGALNACT2Q8N6G5 542 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 BAG1Q99933 345 aaPredicted RBP24.17■■□□□ 1.46
HOXC8-201ENST00000040584 STRA6Q9BX79 667 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 C17orf75Q9HAS0 396 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 PCDHB13Q9Y5F0 798 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 PTCH2Q9Y6C5 1203 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 RTP1P59025 263 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 MKRN4PQ13434 485 aaPredicted RBP24.17■■□□□ 1.46
HOXC8-201ENST00000040584 GNASQ5JWF2 1037 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 SYT10Q6XYQ8 523 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 LRRC71Q8N4P6 559 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 SLAIN1Q8ND83 568 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 ASAP3Q8TDY4 903 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 PPP1R13LQ8WUF5 828 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 THAP9Q9H5L6 903 aa24.17■■□□□ 1.46
HOXC8-201ENST00000040584 IGKV6-21A0A0C4DH24 114 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 A0A1B0GTH6 734 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 PPP1R37O75864 691 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 INHAP05111 366 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 GLRA2P23416 452 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 SMTNP53814 917 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 NCKAP1LP55160 1127 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 KIAA0753Q2KHM9 967 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 STXBP4Q6ZWJ1 553 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 HAUS6Q7Z4H7 955 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 NOC3LQ8WTT2 800 aaKnown RBP24.16■■□□□ 1.46
HOXC8-201ENST00000040584 IFT74Q96LB3 600 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 TSG101Q99816 390 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 UPF3AQ9H1J1 476 aaKnown RBP24.16■■□□□ 1.46
HOXC8-201ENST00000040584 IKZF4Q9H2S9 585 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 KMT5AQ9NQR1 393 aa24.16■■□□□ 1.46
HOXC8-201ENST00000040584 GRK4P32298 578 aa24.15■■□□□ 1.46
HOXC8-201ENST00000040584 PPFIA1Q13136 1202 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms