RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Ccnt1Q9QWV9 724 aaKnown RBP9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fxr2Q9WVR4 673 aaKnown RBP9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Col27a1Q5QNQ9 1845 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ttc3O88196 1979 aaKnown RBP9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 CntrlA2AL36 2334 aa9.06□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slc16a6B1AT66 607 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Maml3D4QGC2 1135 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Cd70O55237 195 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 TertO70372 1122 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 NrlP54846 237 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 EnahQ03173 802 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Cd163Q2VLH6 1121 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gse1Q3U3C9 1213 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Islr2Q5RKR3 745 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ntan1Q64311 310 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 EfsQ64355 560 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fam214aQ69ZK7 1075 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Krba1Q6NXZ1 1043 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fsd1Q7TPM6 496 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Atp6v0d2Q80SY3 350 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slitrk3Q810B9 980 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tti2Q8BGV4 512 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 SheQ8BSD5 492 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Kdm4aQ8BW72 1064 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Kcnj14Q8JZN3 434 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gas2l1Q8JZP9 678 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Phldb2Q8K1N2 1249 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tada3Q8R0L9 432 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Uhrf1Q8VDF2 782 aaKnown RBP9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Nrbp2Q91V36 499 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Apobec3Q99J72 440 aaKnown RBP9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Polr3eQ9CZT4 710 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Noxred1Q9D3S5 366 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ppp2r3cQ9JK24 453 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Sertad1Q9JL10 236 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fut2Q9JL27 347 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Cdc45Q9Z1X9 566 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Brca2P97929 3329 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Zscan20B2KFW1 1030 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Zfp651E9PZ11 729 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Zfp882E9Q4R4 555 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 GclmO09172 274 aaKnown RBP9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Rnaseh1O70338 285 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Aff1O88573 1216 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Map7O88735 730 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Foxp1P58462 705 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 RenbpP82343 430 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 VcpQ01853 806 aaKnown RBP9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Dmc1Q61880 340 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Olfr538Q7TRT5 310 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tor4aQ8BH02 426 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 LRWD1Q8BUI3 648 aaKnown RBP9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Zbtb49Q8BXX2 756 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mettl24Q8CCB5 363 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Plekhh3Q8VCE9 796 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Wdr64Q9D565 1086 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Chmp4cQ9D7F7 232 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 EspnQ9ET47 871 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Cntn6Q9JMB8 1028 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Krt17Q9QWL7 433 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Vav3Q9R0C8 847 aa9.05□□□□□ -0.96
Trim40-203ENSMUST00000172711 Anapc15-psA0A140T8L6 141 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 PotegA5H0M4 473 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Sh2d4bA6X942 431 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ankrd34aB2RW11 495 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ppp2r3aB2RXC8 1150 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mpp3O88910 568 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fmr1P35922 614 aaKnown RBP9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tmod1P49813 359 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Hoxc13P50207 328 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Fam89aQ14BJ1 175 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tmc5Q32NZ6 967 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Xkr4Q5GH67 647 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ptpn14Q62130 1189 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Dhx37Q6NZL1 1150 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Plppr4Q7TME0 766 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 AarsQ8BGQ7 968 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Arl14epQ8BIX3 276 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Prss50Q8BLH5 439 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Nob1Q8BW10 403 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Csnk1g3Q8C4X2 424 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tmem60Q8K174 133 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mettl5Q8K1A0 209 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gga1Q8R0H9 635 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Bicd2Q921C5 820 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Spg21Q9CQC8 308 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Dnajb4Q9D832 337 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 TfebQ9R210 475 aa9.04□□□□□ -0.96
Trim40-203ENSMUST00000172711 Cntnap4Q99P47 1310 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mllt6B1AR10 1109 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gm3095E9Q058 166 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Lrrc32G3XA59 663 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 CcnoP0C242 352 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 SrprbP47758 269 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 MafP54843 370 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Gjb2Q00977 226 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Oas1fQ14AZ4 364 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Pnpla5Q32LZ8 432 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Ctdnep1Q3TP92 244 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slc2a13Q3UHK1 637 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms