RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Cst12Q9DAN8 128 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Mgea5Q9EQQ9 916 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 PygmQ9WUB3 842 aaKnown RBP7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Krt1P04104 637 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Arhgap17Q3UIA2 846 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Lrch2Q3UMG5 773 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Rab3ipQ68EF0 428 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Tspyl5Q69ZB3 406 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Cyp4x1Q6A152 507 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Krt87Q6IMF0 495 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Haus6Q6NV99 933 aaKnown RBP7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Actn1Q7TPR4 892 aaKnown RBP7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Wdr35Q8BND3 1181 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Slc26a6Q8CIW6 758 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Stn1Q8K2X3 378 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Tasp1Q8R1G1 420 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Eaf2Q91ZD6 262 aa7.54□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm3173A6NAS3 172 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm3020E9Q3J7 150 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Slc39a2G3X943 309 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Lrrc32G3XA59 663 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm2897K7N6T7 172 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Msh2P43247 935 aaKnown RBP7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Pms2P54279 859 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 VrtnQ3SYK4 740 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Cracr2bQ80ZJ8 394 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Usp38Q8BW70 1042 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm3411Q8C7R2 150 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Snx30Q8CE50 437 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 ThtpaQ8JZL3 224 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Lmbrd1Q8K0B2 537 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Pnpt1Q8K1R3 783 aaKnown RBP7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Lzts2Q91YU6 671 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 CrebzfQ91ZR3 358 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Foxp3Q99JB6 429 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Rbm31yQ9D3U4 565 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Sdr42e1Q9D665 394 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Chek2Q9Z265 546 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm4871D3Z0W7 314 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Zfp558E9Q1J0 407 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Cyp4f40G3UW81 524 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Rgs9O54828 675 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Ephb2P54763 986 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Ezh1P70351 747 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Runx2Q08775 607 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Tmem109Q3UBX0 243 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Papd7Q6PB75 542 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Mterf4Q8BVN4 346 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Yars2Q8BYL4 472 aaKnown RBP7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Rfx6Q8C7R7 927 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Kat14Q8CID0 779 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Senp2Q91ZX6 588 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 NelfcdQ922L6 591 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Tpd52l2Q9CYZ2 220 aaKnown RBP7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 FliiQ9JJ28 1271 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Krt17Q9QWL7 433 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Shcbp1Q9Z179 668 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Pdcd11Q6NS46 1862 aaKnown RBP7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm8994E9PV04 411 aaKnown RBP7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm1758F6VZZ1 202 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 CraddO88843 199 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Cd3dP04235 173 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Ifnar1P33896 590 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Coq7P97478 217 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Sin3bQ62141 1098 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Bsdc1Q80Y55 427 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Eno4Q8C042 619 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gga1Q8R0H9 635 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Clptm1Q8VBZ3 664 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Tmem192Q9CXT7 266 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Ubxn8Q9QZ49 277 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Morf4l2Q9R0Q4 288 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Abca17E9PX95 1733 aa7.53□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Fam81bA0A140LI28 432 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Rsbn1lD3Z0K6 821 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Kcnh2O35219 1162 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Stx1bP61264 288 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Ddr1Q03146 911 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Orc2Q60862 576 aaKnown RBP7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Arhgap26Q6ZQ82 814 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Akap7Q7TN79 314 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Dnph1Q80VJ3 173 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Cyp26b1Q811W2 512 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 CenpuQ8C4M7 410 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 HnmtQ91VF2 295 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Adarb2Q9JI20 745 aa7.52□□□□□ -1.2
Smc1a-201ENSMUST00000045312 Gm43738A0A0G2JEA5 862 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Cpb1B2RS76 415 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Gm5795E9PZN8 263 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Hsd17b1P51656 344 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Slc12a1P55014 1095 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Znf667Q2TL60 609 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Upf3bQ3ULL6 472 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Asnsd1Q8BFS9 627 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Q91WD4 421 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Emilin1Q99K41 1017 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Tnpo2Q99LG2 887 aaKnown RBP7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Gid8Q9D7M1 228 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Scgb2b21A0A087WQA9 112 aa7.52□□□□□ -1.21
Smc1a-201ENSMUST00000045312 Gm7168A0AUV4 508 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms