RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Krt8P11679 490 aaKnown RBP12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Meis2P97367 477 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 RelaQ04207 549 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 TraddQ3U0V2 310 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Ccdc33Q3ULW6 985 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tmx4Q8C0L0 335 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Btbd6Q8K2J9 488 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Reep2Q8VCD6 254 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Ddx39aQ8VDW0 427 aaKnown RBP12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Eif3hQ91WK2 352 aaKnown RBP12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Armc9Q9D2I5 817 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Kcnq4Q9JK97 696 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Slc6a16A0A1L1SR47 742 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Mmrn1B2RPV6 1210 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Speer2E9Q9U2 264 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 TxkP42682 527 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Rbm31yQ9D3U4 565 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Pabpc6Q9D4E6 643 aaKnown RBP12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Sertad2Q9JJG5 309 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Nudt5Q9JKX6 218 aa12.36□□□□□ -0.43
Herc4-201ENSMUST00000020258 Abca3Q8R420 1704 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tnks1bp1P58871 1720 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cep85lA0A1W2P884 806 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Lrrc74aA0A1Y7VMD6 494 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Ttll10A4Q9F3 704 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Gm3095E9Q058 166 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cdc25aP48964 514 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Smad1P70340 465 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Zfp341Q6PGC9 846 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Atg4cQ811C2 458 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Calhm6Q8C9E8 313 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Pcdha5Q91Y15 934 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Bag2Q91YN9 210 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Med24Q99K74 987 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Usp29Q9ES63 869 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Hs6st3Q9QYK4 470 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 EmcnQ9R0H2 261 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Flt1P35969 1333 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Sema3fO88632 785 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 LxnP70202 222 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 FaxcQ3UMF9 409 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Kcnv2Q8CFS6 562 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Depdc1aQ8CIG0 804 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Afg3l2Q8JZQ2 802 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 AdigQ8R400 80 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Synpo2Q91YE8 1087 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cpb2Q9JHH6 422 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Adam22Q9R1V6 904 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cul1Q9WTX6 776 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cog1Q9Z160 980 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Eya4Q9Z191 616 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Myh10Q61879 1976 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Rad51bO35719 350 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Sema6bO54951 886 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Nsun2Q1HFZ0 757 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Rrp36Q3UFY0 244 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Swap70Q6A028 585 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Q6DFW0 481 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cep104Q80V31 926 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tmem39bQ810L4 492 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Uba6Q8C7R4 1053 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cd248Q91V98 765 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Zcchc8Q9CYA6 709 aaKnown RBP12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Gyg1Q9R062 333 aa12.35□□□□□ -0.43
Herc4-201ENSMUST00000020258 Unc13bQ9Z1N9 1602 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 R3hdm1E9Q9Q2 1135 aaKnown RBP12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 TchpQ3TVW5 497 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Gucy2fQ5SDA5 1108 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 E2f5Q61502 335 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Baiap3Q80TT2 1134 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Znf76Q8BMU0 568 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Ppp1r16bQ8VHQ3 568 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tti1Q91V83 1085 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Scgb2b12S4R2L0 112 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Gm11983V9GXS8 105 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Thsd7aQ69ZU6 1645 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cyp4f40G3UW81 524 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Rsad1Q5SUV1 442 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cnnm4Q69ZF7 771 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tmem120aQ8C1E7 343 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 4921504E06RikQ8CET2 560 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 AticQ9CWJ9 592 aaKnown RBP12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 NkapQ9D0F4 415 aaKnown RBP12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Cnot8Q9D8X5 292 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tacc3Q9JJ11 631 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tfr2Q9JKX3 798 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Prdm11A2AGX3 565 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Vps33bP59016 617 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Dph1Q5NCQ5 438 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 FdxrQ61578 494 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Gpr180Q8BPS4 441 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Trerf1Q8BXJ2 1205 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Tekt2Q922G7 430 aa12.34□□□□□ -0.43
Herc4-201ENSMUST00000020258 Ccdc88aQ5SNZ0 1873 aa12.33□□□□□ -0.44
Herc4-201ENSMUST00000020258 DgkhD3YXJ0 1156 aa12.33□□□□□ -0.44
Herc4-201ENSMUST00000020258 Heatr4E9Q357 955 aa12.33□□□□□ -0.44
Herc4-201ENSMUST00000020258 Epha3P29319 983 aa12.33□□□□□ -0.44
Herc4-201ENSMUST00000020258 Fgfr4Q03142 799 aa12.33□□□□□ -0.44
Herc4-201ENSMUST00000020258 Wdr41Q3UDP0 460 aa12.33□□□□□ -0.44
Herc4-201ENSMUST00000020258 Sin3bQ62141 1098 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms