RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 CatspereP0DP43 985 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Mnat1P51949 309 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 TraddQ3U0V2 310 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 C130026I21RikQ8C898 291 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Tesk2Q8VCT9 570 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Bhmt2Q91WS4 363 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Coa7Q921H9 231 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Slc5a5Q99PN0 618 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Tfr2Q9JKX3 798 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gm15262A0A140LIQ5 728 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Lrrc38A2VDH3 298 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Atp2c2A7L9Z8 944 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Kcnk16G5E845 292 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gm8298J3QPI0 401 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gsg1l2M0QWL6 290 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Hoxa13Q62424 386 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ssxb10Q6XAR7 170 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Phf20Q8BLG0 1010 aaKnown RBP12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Epn2Q8CHU3 595 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Slc26a7Q8R2Z3 656 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 St5Q924W7 1134 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Capn15Q9JLG8 1095 aa12.97□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gpr161B2RPY5 545 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Aknad1E9Q8N6 675 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Idh1O88844 414 aaKnown RBP12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Casp14O89094 257 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 IvlP48997 467 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Vmn1r209Q5NC97 312 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Tmc3Q7TQ69 1130 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gm5622Q810Q0 167 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Yars2Q8BYL4 472 aaKnown RBP12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Tmem120aQ8C1E7 343 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Golga1Q9CW79 758 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Thumpd2Q9CZB3 528 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Amhr2Q8K592 568 aa12.96□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Patl2A2ARM1 529 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ppp1r9aH3BJD6 1292 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Pik3caP42337 1068 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Abl2Q4JIM5 1182 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Znf652Q5DU09 608 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Krt77Q6IFZ6 572 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Fsd1lQ8BYN5 507 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 PpatQ8CIH9 517 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ints9Q8K114 658 aaKnown RBP12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Kiaa0319lQ8K135 1048 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Lrrc14Q8VC16 493 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Vps36Q91XD6 386 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Dph6Q9CQ28 267 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Chchd3Q9CRB9 227 aaKnown RBP12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Cep83Q9D5R3 692 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Eid1Q9DCR4 169 aa12.96□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Eif3dO70194 548 aaKnown RBP12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 ChukQ60680 745 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Vav2Q60992 868 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ero1aQ8R180 464 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Orc3Q9JK30 715 aaKnown RBP12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Cacna1sQ02789 1880 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Gm38392E9Q2A2 434 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Myo1eE9Q634 1107 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Psd3Q2PFD7 1037 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ogfod1Q3U0K8 545 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Rrp36Q3UFY0 244 aaKnown RBP12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 GmncQ3URY2 333 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Miga1Q4QQM5 600 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Gbp4Q61107 620 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Unc5bQ8K1S3 945 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 SarnpQ9D1J3 210 aaKnown RBP12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Nup188Q6ZQH8 1759 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Osbpl7A2A716 963 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Kcng1A2BDX4 514 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Adam7O35227 789 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Vps41Q5KU39 853 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 NrcamQ810U4 1256 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Btbd7Q8CFE5 1130 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Cwf19l1Q8CI33 537 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ppp1r11Q8K1L5 131 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Nop56Q9D6Z1 580 aaKnown RBP12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Tlr9Q9EQU3 1032 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Phactr1Q2M3X8 580 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 LnpkQ7TQ95 425 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Acbd3Q8BMP6 525 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Xab2Q9DCD2 855 aaKnown RBP12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Cpb2Q9JHH6 422 aa12.95□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ccdc88cQ6VGS5 2009 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 DohhA0A1Y7VJ29 135 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Slurp2P0DP59 97 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Meis2P97367 477 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 GclcP97494 637 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Cnot7Q60809 285 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Kiaa1328Q6NZK5 612 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Stk38lQ7TSE6 464 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ints8Q80V86 995 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Armc6Q8BNU0 468 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 PreplQ8C167 725 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Tom1l1Q923U0 474 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Znf394Q9Z1D9 521 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Nfs1Q9Z1J3 459 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Tnfrsf11aO35305 625 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Calb1P12658 261 aa12.94□□□□□ -0.34
Rfx1-201ENSMUST00000005600 Ca8P28651 291 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms