RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Cabs1Q8C633 391 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Pop1Q8K205 1045 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Acat1Q8QZT1 424 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Defb15Q8R2I5 79 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Kremen1Q99N43 473 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Setd6Q9CWY3 473 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Tmod2Q9JKK7 351 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Hebp1Q9R257 190 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Zmym2Q9CU65 1376 aa13.58□□□□□ -0.24
Msh6-201ENSMUST00000005503 Map3k15A2AQW0 1331 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Gm28043E0CXC2 719 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Taf4E9QAP7 1042 aaKnown RBP13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Prkg1P0C605 671 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 DesP31001 469 aaKnown RBP13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Psmc4P54775 418 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Krt35Q497I4 455 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cyp26b1Q811W2 512 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cdk17Q8K0D0 523 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Amhr2Q8K592 568 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Kbtbd4Q8R179 534 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cyp2s1Q9DBX6 501 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Caln1Q9JJG7 219 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Kcnh4A2A5F7 1018 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Gm5795E9PZN8 263 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Dzip1lQ499E4 774 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Sin3bQ62141 1098 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Plcg2Q8CIH5 1265 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Slc44a4Q91VA1 707 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Rabep2Q91WG2 554 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Trap1Q9CQN1 706 aaKnown RBP13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 IkbipQ9DBZ1 373 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Ddx20Q9JJY4 825 aaKnown RBP13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Ttll10A4Q9F3 704 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Clrn2B2RVW2 232 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Heatr4E9Q357 955 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cyth3O08967 399 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Serpini1O35684 410 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Nol4P60954 483 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Sult1d1Q3UZZ6 295 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Rbbp5Q8BX09 538 aaKnown RBP13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Actl9Q8CG27 415 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 HibchQ8QZS1 385 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Msantd4Q91YU3 345 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Igf2bp3Q9CPN8 579 aaKnown RBP13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Nudt12Q9DCN1 462 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Frmpd4A2AFR3 1320 aa13.57□□□□□ -0.24
Msh6-201ENSMUST00000005503 Zfp839E9PUU5 921 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 ZfxP17012 799 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cdc25aP48964 514 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Fermt1P59113 677 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Rcn1Q05186 325 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Hipk4Q3V016 616 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Wnk4Q80UE6 1222 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Kat14Q8CID0 779 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Sf3b3Q921M3 1217 aaKnown RBP13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Pgm1Q9D0F9 562 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cse1lQ9ERK4 971 aaKnown RBP13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Ccdc175E9PVB3 822 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Gm3182K7N6T8 263 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Sfi1Q3UZY0 1216 aaKnown RBP13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Tmed1Q3V009 227 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Foxd1Q61345 456 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Tdpoz4Q6YCH2 370 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Ddx39aQ8VDW0 427 aaKnown RBP13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Fxr2Q9WVR4 673 aaKnown RBP13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Crlf3Q9Z2L7 442 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Gimd1E9PW74 217 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Rfpl4bJ3QPR6 266 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Tab3Q571K4 716 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 C2cd5Q7TPS5 1016 aaKnown RBP13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Elmo3Q8BYZ7 720 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Apol7cQ8C6E1 369 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 RelaQ04207 549 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 ChukQ60680 745 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cwf19l1Q8CI33 537 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Dtnbp1Q91WZ8 352 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Scgb2b20Q9JI02 112 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Pard6bQ9JK83 371 aa13.56□□□□□ -0.24
Msh6-201ENSMUST00000005503 Arhgef10lA2AWP8 1280 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Flot1O08917 428 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Lig1P37913 916 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Smad1P70340 465 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Thumpd3P97770 505 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Gcnt1Q09324 428 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Zfp446Q8C9M8 523 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Dusp19Q8K4T5 220 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Trpm8Q8R4D5 1104 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cdc26Q99JP4 85 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 4930550L24RikQ99PA7 320 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Ddx24Q9ESV0 857 aaKnown RBP13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Dnajb7Q9QYI8 312 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 MetP16056 1379 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Tph1P17532 447 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Trmt1Q3TX08 663 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Odr4Q4PJX1 447 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Xlr3bQ6P205 226 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Cpa1Q7TPZ8 419 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 Ildr1Q8CBR1 537 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 VillQ91YD6 859 aa13.55□□□□□ -0.24
Msh6-201ENSMUST00000005503 IscuQ9D7P6 168 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms