RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Kcnh2O35219 1162 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Atxn10P28658 475 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Vps33bP59016 617 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 MagohP61327 146 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Serpina1eQ00898 413 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Prr18Q6PAN7 307 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ppp4r4Q8C0Y0 875 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Uap1Q91YN5 522 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 MagohbQ9CQL1 146 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Scyl3Q9DBQ7 735 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Eno3P21550 434 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Spdye4aQ5IBH6 268 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Krt40Q6IFX3 439 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dclk2Q6PGN3 756 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Serpina3bQ8BYY9 420 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rrp1bQ91YK2 724 aaKnown RBP9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 EcsitQ9QZH6 435 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Extl3Q9WVL6 918 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 FancaQ9JL70 1439 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Samd9lQ69Z37 1561 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PxdnQ3UQ28 1475 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rims1Q99NE5 1463 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 L3mbtl1A2A5N8 826 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Nccrp1G3X9C2 266 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ap1m1P35585 423 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Parp3Q3ULW8 533 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 E330034G19RikQ3UWX6 351 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rgl1Q60695 768 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Scnn1aQ61180 699 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Arid3aQ62431 601 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PigsQ6PD26 555 aaKnown RBP9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rundc3bQ6PDC0 408 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 BicralQ8CHH5 1074 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fam20aQ8CID3 541 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Klhl2Q8JZP3 593 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ccdc80Q8R2G6 949 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ola1Q9CZ30 396 aaKnown RBP9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Hic1Q9R1Y5 733 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Mtmr2Q9Z2D1 643 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Adcy10Q8C0T9 1614 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 MypnQ5DTJ9 1315 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fam129cD3YZB0 591 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm10639E9Q6L7 222 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tmem132bF7BAB2 1078 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gsta2P10648 222 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Adcy2Q80TL1 1090 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Calhm6Q8C9E8 313 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Olfr390Q8VEZ7 311 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Vwa5aQ99KC8 793 aaKnown RBP9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Akr1b10G5E895 316 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Klc2O88448 599 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Actr2P61161 394 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dab1P97318 588 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm10392Q3V3I3 114 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 4930504O13RikQ8C5Z9 145 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 N4bp3Q8C7U1 537 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Cdk8Q8R3L8 464 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Q91WD4 421 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 MlxiplQ99MZ3 864 aa9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Zcchc17Q9ESX4 241 aaKnown RBP9.72□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ttc30a2A2AKQ8 664 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Eno1P17182 434 aaKnown RBP9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 StamP70297 548 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 RasefQ5RI75 627 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Hspa1aQ61696 641 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gramd1bQ80TI0 738 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lyve1Q8BHC0 318 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Frmd4aQ8BIE6 1020 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Snx30Q8CE50 437 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pcdhb11Q91UZ8 797 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ttc30a1Q99J38 664 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ttc30bQ9CY00 664 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Trpc4Q9QUQ5 974 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Slc26a4Q9R155 780 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 C87977A2A958 498 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lrrc63A6H694 637 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm8922F6XVS9 199 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 GssP51855 474 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Erp29P57759 262 aaKnown RBP9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Eif1adQ3THJ3 170 aaKnown RBP9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lrig2Q52KR2 1054 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 LdhdQ7TNG8 484 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tada1Q99LM9 335 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gins2Q9D600 185 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 MajinQ9D992 256 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Asxl2Q8BZ32 1370 aa9.71□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pla2g4aP47713 748 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Epas1P97481 874 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PrlrQ08501 608 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Heatr9Q5QNV8 569 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Samhd1Q60710 627 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 BegainQ68EF6 600 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc9c1Q6UJY2 1175 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PhkbQ7TSH2 1085 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 ClmnQ8C5W0 1052 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 CgasQ8C6L5 507 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cog3Q8CI04 820 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Alas1Q8VC19 642 aa9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Prpf6Q91YR7 941 aaKnown RBP9.71□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PdhbQ9D051 359 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms