RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PLA2R1Q13018 1463 aa24.91■■□□□ 1.58
PHGDH-226ENST00000641756 MAGI2Q86UL8 1455 aa24.91■■□□□ 1.58
PHGDH-226ENST00000641756 KIF7Q2M1P5 1343 aa24.9■■□□□ 1.58
PHGDH-226ENST00000641756 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.57
PHGDH-226ENST00000641756 POLR1AO95602 1720 aaPredicted RBP24.88■■□□□ 1.57
PHGDH-226ENST00000641756 RTEL1-TNFRSF6BF6WH68 1400 aa24.88■■□□□ 1.57
PHGDH-226ENST00000641756 KDM5CP41229 1560 aa24.87■■□□□ 1.57
PHGDH-226ENST00000641756 NPM1P06748 294 aaKnown RBP eCLIP24.85■■□□□ 1.57
PHGDH-226ENST00000641756 ADGRL1O94910 1474 aa24.85■■□□□ 1.57
PHGDH-226ENST00000641756 RGL3Q3MIN7 710 aa24.85■■□□□ 1.57
PHGDH-226ENST00000641756 CARD11Q9BXL7 1154 aa24.84■■□□□ 1.57
PHGDH-226ENST00000641756 BCORL1Q5H9F3 1711 aa24.84■■□□□ 1.57
PHGDH-226ENST00000641756 SCAPERQ9BY12 1400 aa24.83■■□□□ 1.57
PHGDH-226ENST00000641756 ATP7AQ04656 1500 aa24.82■■□□□ 1.56
PHGDH-226ENST00000641756 MYT1LQ9UL68 1186 aa24.82■■□□□ 1.56
PHGDH-226ENST00000641756 INO80Q9ULG1 1556 aaPredicted RBP24.81■■□□□ 1.56
PHGDH-226ENST00000641756 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
PHGDH-226ENST00000641756 A2MP01023 1474 aa24.77■■□□□ 1.56
PHGDH-226ENST00000641756 ATP10AO60312 1499 aa24.77■■□□□ 1.56
PHGDH-226ENST00000641756 PRAG1Q86YV5 1406 aa24.76■■□□□ 1.55
PHGDH-226ENST00000641756 ROCK2O75116 1388 aaKnown RBP24.76■■□□□ 1.55
PHGDH-226ENST00000641756 E9PCH4 1651 aa24.74■■□□□ 1.55
PHGDH-226ENST00000641756 PRKRIP1Q9H875 184 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-226ENST00000641756 DEPDC5O75140 1603 aa24.73■■□□□ 1.55
PHGDH-226ENST00000641756 TRPM1Q7Z4N2 1603 aa24.73■■□□□ 1.55
PHGDH-226ENST00000641756 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
PHGDH-226ENST00000641756 KIF3BO15066 747 aa24.7■■□□□ 1.54
PHGDH-226ENST00000641756 CCDC184Q52MB2 194 aa24.7■■□□□ 1.54
PHGDH-226ENST00000641756 CD109Q6YHK3 1445 aa24.7■■□□□ 1.54
PHGDH-226ENST00000641756 DHX29Q7Z478 1369 aaKnown RBP24.68■■□□□ 1.54
PHGDH-226ENST00000641756 NBPF1Q3BBV0 1214 aa24.68■■□□□ 1.54
PHGDH-226ENST00000641756 KIDINS220Q9ULH0 1771 aa24.67■■□□□ 1.54
PHGDH-226ENST00000641756 ARID4BQ4LE39 1312 aaPredicted RBP24.66■■□□□ 1.54
PHGDH-226ENST00000641756 KANK1Q14678 1352 aa24.65■■□□□ 1.54
PHGDH-226ENST00000641756 TET3O43151 1660 aa24.65■■□□□ 1.54
PHGDH-226ENST00000641756 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
PHGDH-226ENST00000641756 EIF2AK4Q9P2K8 1649 aaKnown RBP24.64■■□□□ 1.54
PHGDH-226ENST00000641756 TRPM2O94759 1503 aa24.64■■□□□ 1.53
PHGDH-226ENST00000641756 SPHKAPQ2M3C7 1700 aa24.64■■□□□ 1.53
PHGDH-226ENST00000641756 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
PHGDH-226ENST00000641756 CNGB1Q14028 1251 aaPredicted RBP24.62■■□□□ 1.53
PHGDH-226ENST00000641756 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
PHGDH-226ENST00000641756 MROH1Q8NDA8 1641 aa24.62■■□□□ 1.53
PHGDH-226ENST00000641756 CFAP74Q9C0B2 1584 aa24.62■■□□□ 1.53
PHGDH-226ENST00000641756 HNRNPUQ00839 825 aaKnown RBP eCLIP24.61■■□□□ 1.53
PHGDH-226ENST00000641756 PRDM15P57071 1507 aaPredicted RBP24.61■■□□□ 1.53
PHGDH-226ENST00000641756 PTPRTO14522 1441 aa24.6■■□□□ 1.53
PHGDH-226ENST00000641756 GPRASP1Q5JY77 1395 aa24.6■■□□□ 1.53
PHGDH-226ENST00000641756 MRS2Q9HD23 443 aa24.59■■□□□ 1.53
PHGDH-226ENST00000641756 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
PHGDH-226ENST00000641756 POGZQ7Z3K3 1410 aa24.59■■□□□ 1.53
PHGDH-226ENST00000641756 CEP152O94986 1710 aa24.58■■□□□ 1.53
PHGDH-226ENST00000641756 LAMC1P11047 1609 aa24.56■■□□□ 1.52
PHGDH-226ENST00000641756 FAM9BQ8IZU0 186 aa24.55■■□□□ 1.52
PHGDH-226ENST00000641756 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
PHGDH-226ENST00000641756 MADDQ8WXG6 1647 aa24.51■■□□□ 1.51
PHGDH-226ENST00000641756 HECW2Q9P2P5 1572 aa24.51■■□□□ 1.51
PHGDH-226ENST00000641756 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
PHGDH-226ENST00000641756 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
PHGDH-226ENST00000641756 EFCAB6Q5THR3 1501 aa24.49■■□□□ 1.51
PHGDH-226ENST00000641756 FRMPD1Q5SYB0 1578 aa24.49■■□□□ 1.51
PHGDH-226ENST00000641756 UGGT1Q9NYU2 1555 aa24.49■■□□□ 1.51
PHGDH-226ENST00000641756 PPRC1Q5VV67 1664 aaKnown RBP24.48■■□□□ 1.51
PHGDH-226ENST00000641756 RAPGEF3O95398 923 aa24.48■■□□□ 1.51
PHGDH-226ENST00000641756 NEO1Q92859 1461 aa24.47■■□□□ 1.51
PHGDH-226ENST00000641756 TESK2Q96S53 571 aa24.46■■□□□ 1.51
PHGDH-226ENST00000641756 ABCA6Q8N139 1617 aa24.46■■□□□ 1.51
PHGDH-226ENST00000641756 DISP3Q9P2K9 1392 aa24.45■■□□□ 1.5
PHGDH-226ENST00000641756 GGT6Q6P531 493 aa24.44■■□□□ 1.5
PHGDH-226ENST00000641756 COL17A1Q9UMD9 1497 aaPredicted RBP24.44■■□□□ 1.5
PHGDH-226ENST00000641756 FKBP8Q14318 412 aa24.44■■□□□ 1.5
PHGDH-226ENST00000641756 LMTK2Q8IWU2 1503 aa24.43■■□□□ 1.5
PHGDH-226ENST00000641756 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
PHGDH-226ENST00000641756 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
PHGDH-226ENST00000641756 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
PHGDH-226ENST00000641756 MAP3K4Q9Y6R4 1608 aa24.4■■□□□ 1.5
PHGDH-226ENST00000641756 STAC3Q96MF2 364 aa24.39■■□□□ 1.49
PHGDH-226ENST00000641756 KIF1BO60333 1816 aa24.39■■□□□ 1.49
PHGDH-226ENST00000641756 IQGAP1P46940 1657 aa24.38■■□□□ 1.49
PHGDH-226ENST00000641756 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
PHGDH-226ENST00000641756 TMF1P82094 1093 aa24.37■■□□□ 1.49
PHGDH-226ENST00000641756 BCANQ96GW7 911 aa24.37■■□□□ 1.49
PHGDH-226ENST00000641756 MROH2AA6NES4 1674 aa24.37■■□□□ 1.49
PHGDH-226ENST00000641756 NEFLP07196 543 aa24.36■■□□□ 1.49
PHGDH-226ENST00000641756 CFAP65Q6ZU64 1925 aaKnown RBP24.36■■□□□ 1.49
PHGDH-226ENST00000641756 NPATQ14207 1427 aa24.35■■□□□ 1.49
PHGDH-226ENST00000641756 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
PHGDH-226ENST00000641756 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
PHGDH-226ENST00000641756 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
PHGDH-226ENST00000641756 SCAF11Q99590 1463 aaKnown RBP24.33■■□□□ 1.49
PHGDH-226ENST00000641756 ADGRF5Q8IZF2 1346 aa24.32■■□□□ 1.48
PHGDH-226ENST00000641756 ABCC3O15438 1527 aa24.32■■□□□ 1.48
PHGDH-226ENST00000641756 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
PHGDH-226ENST00000641756 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
PHGDH-226ENST00000641756 RALBP1Q15311 655 aa24.32■■□□□ 1.48
PHGDH-226ENST00000641756 GLI2P10070 1586 aa24.31■■□□□ 1.48
PHGDH-226ENST00000641756 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
PHGDH-226ENST00000641756 MYOM2P54296 1465 aa24.31■■□□□ 1.48
PHGDH-226ENST00000641756 MYBBP1AQ9BQG0 1328 aaKnown RBP24.31■■□□□ 1.48
PHGDH-226ENST00000641756 PER1O15534 1290 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms