RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 MROH2AA6NES4 1674 aa25.42■■□□□ 1.66
RGPD1-205ENST00000641339 CLTCQ00610 1675 aaKnown RBP25.41■■□□□ 1.66
RGPD1-205ENST00000641339 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
RGPD1-205ENST00000641339 PTPRKQ15262 1439 aa25.4■■□□□ 1.66
RGPD1-205ENST00000641339 WASHC2CQ9Y4E1 1318 aa25.38■■□□□ 1.65
RGPD1-205ENST00000641339 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
RGPD1-205ENST00000641339 PREX1Q8TCU6 1659 aa25.37■■□□□ 1.65
RGPD1-205ENST00000641339 NPATQ14207 1427 aa25.37■■□□□ 1.65
RGPD1-205ENST00000641339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.36■■□□□ 1.65
RGPD1-205ENST00000641339 EIF2AK4Q9P2K8 1649 aaKnown RBP25.36■■□□□ 1.65
RGPD1-205ENST00000641339 ERBINQ96RT1 1412 aa25.36■■□□□ 1.65
RGPD1-205ENST00000641339 RNF17Q9BXT8 1623 aaKnown RBP25.35■■□□□ 1.65
RGPD1-205ENST00000641339 KDM5DQ9BY66 1539 aa25.34■■□□□ 1.65
RGPD1-205ENST00000641339 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
RGPD1-205ENST00000641339 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
RGPD1-205ENST00000641339 SETD1BQ9UPS6 1966 aaKnown RBP25.33■■□□□ 1.64
RGPD1-205ENST00000641339 MROH1Q8NDA8 1641 aa25.32■■□□□ 1.64
RGPD1-205ENST00000641339 FBXO31Q5XUX0 539 aaPredicted RBP25.31■■□□□ 1.64
RGPD1-205ENST00000641339 FBXO41Q8TF61 875 aa25.31■■□□□ 1.64
RGPD1-205ENST00000641339 RRBP1Q9P2E9 1410 aaKnown RBP25.29■■□□□ 1.64
RGPD1-205ENST00000641339 ABCC3O15438 1527 aa25.28■■□□□ 1.64
RGPD1-205ENST00000641339 PZPP20742 1482 aa25.27■■□□□ 1.64
RGPD1-205ENST00000641339 ITGAEP38570 1179 aa25.26■■□□□ 1.63
RGPD1-205ENST00000641339 ROCK1Q13464 1354 aa25.26■■□□□ 1.63
RGPD1-205ENST00000641339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.24■■□□□ 1.63
RGPD1-205ENST00000641339 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
RGPD1-205ENST00000641339 ANKRD50Q9ULJ7 1429 aa25.23■■□□□ 1.63
RGPD1-205ENST00000641339 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
RGPD1-205ENST00000641339 DEPDC5O75140 1603 aa25.21■■□□□ 1.63
RGPD1-205ENST00000641339 ZC3H13Q5T200 1668 aaKnown RBP25.2■■□□□ 1.62
RGPD1-205ENST00000641339 TNRQ92752 1358 aa25.19■■□□□ 1.62
RGPD1-205ENST00000641339 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
RGPD1-205ENST00000641339 MYO3AQ8NEV4 1616 aa25.16■■□□□ 1.62
RGPD1-205ENST00000641339 KANK1Q14678 1352 aa25.16■■□□□ 1.62
RGPD1-205ENST00000641339 CEP152O94986 1710 aa25.15■■□□□ 1.62
RGPD1-205ENST00000641339 ARHGAP31Q2M1Z3 1444 aa25.15■■□□□ 1.62
RGPD1-205ENST00000641339 LMTK2Q8IWU2 1503 aa25.13■■□□□ 1.61
RGPD1-205ENST00000641339 CAMSAP1Q5T5Y3 1602 aa25.13■■□□□ 1.61
RGPD1-205ENST00000641339 CERKQ8TCT0 537 aa25.13■■□□□ 1.61
RGPD1-205ENST00000641339 CEP170BQ9Y4F5 1589 aaPredicted RBP25.13■■□□□ 1.61
RGPD1-205ENST00000641339 A2ML1A8K2U0 1454 aa25.12■■□□□ 1.61
RGPD1-205ENST00000641339 ERVK-7P63135 1459 aa25.12■■□□□ 1.61
RGPD1-205ENST00000641339 SPATA31D1Q6ZQQ2 1576 aa25.12■■□□□ 1.61
RGPD1-205ENST00000641339 ZNF142P52746 1687 aaPredicted RBP25.11■■□□□ 1.61
RGPD1-205ENST00000641339 NLRP1Q9C000 1473 aa25.08■■□□□ 1.6
RGPD1-205ENST00000641339 DMRT2Q9Y5R5 561 aa25.07■■□□□ 1.6
RGPD1-205ENST00000641339 NCKAP5LQ9HCH0 1330 aa25.06■■□□□ 1.6
RGPD1-205ENST00000641339 PLA2R1Q13018 1463 aa25.04■■□□□ 1.6
RGPD1-205ENST00000641339 UNC13BO14795 1591 aa25.03■■□□□ 1.6
RGPD1-205ENST00000641339 PTPRTO14522 1441 aa25.03■■□□□ 1.6
RGPD1-205ENST00000641339 NAIPQ13075 1403 aa25.03■■□□□ 1.6
RGPD1-205ENST00000641339 EFCAB6Q5THR3 1501 aa25.02■■□□□ 1.6
RGPD1-205ENST00000641339 PKD2Q13563 968 aa25.01■■□□□ 1.59
RGPD1-205ENST00000641339 THEMISQ8N1K5 641 aaPredicted RBP25.01■■□□□ 1.59
RGPD1-205ENST00000641339 NUP155O75694 1391 aa24.99■■□□□ 1.59
RGPD1-205ENST00000641339 UGGT1Q9NYU2 1555 aa24.99■■□□□ 1.59
RGPD1-205ENST00000641339 CFAP65Q6ZU64 1925 aaKnown RBP24.98■■□□□ 1.59
RGPD1-205ENST00000641339 NOS1P29475 1434 aa24.98■■□□□ 1.59
RGPD1-205ENST00000641339 HFM1A2PYH4 1435 aa24.96■■□□□ 1.59
RGPD1-205ENST00000641339 IDI1Q13907 227 aa24.96■■□□□ 1.59
RGPD1-205ENST00000641339 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
RGPD1-205ENST00000641339 TET3O43151 1660 aa24.94■■□□□ 1.58
RGPD1-205ENST00000641339 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
RGPD1-205ENST00000641339 SYNMO15061 1565 aa24.93■■□□□ 1.58
RGPD1-205ENST00000641339 ANKLE2Q86XL3 938 aa24.92■■□□□ 1.58
RGPD1-205ENST00000641339 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
RGPD1-205ENST00000641339 GCC2Q8IWJ2 1684 aa24.88■■□□□ 1.57
RGPD1-205ENST00000641339 LTBP4Q8N2S1 1624 aa24.88■■□□□ 1.57
RGPD1-205ENST00000641339 UBR1Q8IWV7 1749 aa24.88■■□□□ 1.57
RGPD1-205ENST00000641339 NEURL4Q96JN8 1562 aa24.87■■□□□ 1.57
RGPD1-205ENST00000641339 E9PCH4 1651 aa24.86■■□□□ 1.57
RGPD1-205ENST00000641339 PIK3C2BO00750 1634 aa24.86■■□□□ 1.57
RGPD1-205ENST00000641339 LTKP29376 864 aa24.85■■□□□ 1.57
RGPD1-205ENST00000641339 MED14O60244 1454 aa24.84■■□□□ 1.57
RGPD1-205ENST00000641339 ARHGAP23Q9P227 1491 aa24.84■■□□□ 1.57
RGPD1-205ENST00000641339 SLIT1O75093 1534 aa24.82■■□□□ 1.56
RGPD1-205ENST00000641339 STAG3Q9UJ98 1225 aa24.82■■□□□ 1.56
RGPD1-205ENST00000641339 ZNF335Q9H4Z2 1342 aaPredicted RBP24.82■■□□□ 1.56
RGPD1-205ENST00000641339 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
RGPD1-205ENST00000641339 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
RGPD1-205ENST00000641339 NPHP4O75161 1426 aaPredicted RBP24.8■■□□□ 1.56
RGPD1-205ENST00000641339 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
RGPD1-205ENST00000641339 POLR1AO95602 1720 aaPredicted RBP24.8■■□□□ 1.56
RGPD1-205ENST00000641339 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
RGPD1-205ENST00000641339 SCAF11Q99590 1463 aaKnown RBP24.77■■□□□ 1.56
RGPD1-205ENST00000641339 ADGRB3O60242 1522 aa24.76■■□□□ 1.55
RGPD1-205ENST00000641339 EID1Q9Y6B2 187 aa24.75■■□□□ 1.55
RGPD1-205ENST00000641339 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
RGPD1-205ENST00000641339 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
RGPD1-205ENST00000641339 SETD5Q9C0A6 1442 aa24.71■■□□□ 1.55
RGPD1-205ENST00000641339 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
RGPD1-205ENST00000641339 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
RGPD1-205ENST00000641339 ZFYVE9O95405 1425 aa24.69■■□□□ 1.54
RGPD1-205ENST00000641339 IQSEC2Q5JU85 1478 aa24.68■■□□□ 1.54
RGPD1-205ENST00000641339 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
RGPD1-205ENST00000641339 FOXD1Q16676 465 aa24.65■■□□□ 1.54
RGPD1-205ENST00000641339 SPHKAPQ2M3C7 1700 aa24.65■■□□□ 1.54
RGPD1-205ENST00000641339 RIMS2Q9UQ26 1411 aa24.65■■□□□ 1.54
RGPD1-205ENST00000641339 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
RGPD1-205ENST00000641339 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms