RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 FYCO1Q9BQS8 1478 aa24.19■■□□□ 1.46
KCNC1-213ENST00000640909 RNF17Q9BXT8 1623 aaKnown RBP24.17■■□□□ 1.46
KCNC1-213ENST00000640909 SYNMO15061 1565 aa24.17■■□□□ 1.46
KCNC1-213ENST00000640909 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.46
KCNC1-213ENST00000640909 TNRQ92752 1358 aa24.16■■□□□ 1.46
KCNC1-213ENST00000640909 PZPP20742 1482 aa24.16■■□□□ 1.46
KCNC1-213ENST00000640909 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
KCNC1-213ENST00000640909 ANKLE2Q86XL3 938 aa24.13■■□□□ 1.45
KCNC1-213ENST00000640909 KDM5DQ9BY66 1539 aa24.13■■□□□ 1.45
KCNC1-213ENST00000640909 IQGAP1P46940 1657 aa24.12■■□□□ 1.45
KCNC1-213ENST00000640909 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
KCNC1-213ENST00000640909 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
KCNC1-213ENST00000640909 CFDP1Q9UEE9 299 aaPredicted RBP24.1■■□□□ 1.45
KCNC1-213ENST00000640909 UGGT1Q9NYU2 1555 aa24.1■■□□□ 1.45
KCNC1-213ENST00000640909 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
KCNC1-213ENST00000640909 DHX29Q7Z478 1369 aaKnown RBP24.06■■□□□ 1.44
KCNC1-213ENST00000640909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.06■■□□□ 1.44
KCNC1-213ENST00000640909 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
KCNC1-213ENST00000640909 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
KCNC1-213ENST00000640909 STRCP1A6NGW2 1772 aa24.05■■□□□ 1.44
KCNC1-213ENST00000640909 MIA2Q96PC5 1412 aa24.03■■□□□ 1.44
KCNC1-213ENST00000640909 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
KCNC1-213ENST00000640909 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.44
KCNC1-213ENST00000640909 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
KCNC1-213ENST00000640909 RGS17Q9UGC6 210 aaPredicted RBP23.99■■□□□ 1.43
KCNC1-213ENST00000640909 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
KCNC1-213ENST00000640909 ZC3H13Q5T200 1668 aaKnown RBP23.97■■□□□ 1.43
KCNC1-213ENST00000640909 WASHC2CQ9Y4E1 1318 aa23.94■■□□□ 1.42
KCNC1-213ENST00000640909 KIF3BO15066 747 aa23.94■■□□□ 1.42
KCNC1-213ENST00000640909 MTUS2Q5JR59 1369 aa23.92■■□□□ 1.42
KCNC1-213ENST00000640909 CCDC141Q6ZP82 1450 aa23.92■■□□□ 1.42
KCNC1-213ENST00000640909 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.42
KCNC1-213ENST00000640909 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
KCNC1-213ENST00000640909 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
KCNC1-213ENST00000640909 ZNF644Q9H582 1327 aaPredicted RBP23.86■■□□□ 1.41
KCNC1-213ENST00000640909 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
KCNC1-213ENST00000640909 UBR1Q8IWV7 1749 aa23.86■■□□□ 1.41
KCNC1-213ENST00000640909 RSPH4AQ5TD94 716 aa23.85■■□□□ 1.41
KCNC1-213ENST00000640909 SCAF11Q99590 1463 aaKnown RBP23.85■■□□□ 1.41
KCNC1-213ENST00000640909 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
KCNC1-213ENST00000640909 ABCC3O15438 1527 aa23.83■■□□□ 1.41
KCNC1-213ENST00000640909 ERVK-7P63135 1459 aa23.82■■□□□ 1.4
KCNC1-213ENST00000640909 SLIT1O75093 1534 aa23.81■■□□□ 1.4
KCNC1-213ENST00000640909 POTEAQ6S8J7 498 aa23.81■■□□□ 1.4
KCNC1-213ENST00000640909 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
KCNC1-213ENST00000640909 ARHGEF5Q12774 1597 aa23.8■■□□□ 1.4
KCNC1-213ENST00000640909 ARHGAP23Q9P227 1491 aa23.8■■□□□ 1.4
KCNC1-213ENST00000640909 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
KCNC1-213ENST00000640909 SETD1AO15047 1707 aaKnown RBP23.76■■□□□ 1.39
KCNC1-213ENST00000640909 ROBO1Q9Y6N7 1651 aa23.76■■□□□ 1.39
KCNC1-213ENST00000640909 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
KCNC1-213ENST00000640909 NCOA2Q15596 1464 aa23.75■■□□□ 1.39
KCNC1-213ENST00000640909 MROH1Q8NDA8 1641 aa23.71■■□□□ 1.39
KCNC1-213ENST00000640909 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
KCNC1-213ENST00000640909 CEP152O94986 1710 aa23.69■■□□□ 1.38
KCNC1-213ENST00000640909 KDM5AP29375 1690 aaKnown RBP23.68■■□□□ 1.38
KCNC1-213ENST00000640909 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
KCNC1-213ENST00000640909 TSPY4P0CV99 314 aa23.67■■□□□ 1.38
KCNC1-213ENST00000640909 TSPY10P0CW01 314 aa23.67■■□□□ 1.38
KCNC1-213ENST00000640909 LTKP29376 864 aa23.67■■□□□ 1.38
KCNC1-213ENST00000640909 TXNDC2Q86VQ3 553 aa23.67■■□□□ 1.38
KCNC1-213ENST00000640909 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
KCNC1-213ENST00000640909 EID1Q9Y6B2 187 aa23.65■■□□□ 1.38
KCNC1-213ENST00000640909 ARHGAP31Q2M1Z3 1444 aa23.65■■□□□ 1.38
KCNC1-213ENST00000640909 NKTRP30414 1462 aaKnown RBP23.63■■□□□ 1.37
KCNC1-213ENST00000640909 PHLPP1O60346 1717 aa23.62■■□□□ 1.37
KCNC1-213ENST00000640909 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
KCNC1-213ENST00000640909 PRDM15P57071 1507 aaPredicted RBP23.61■■□□□ 1.37
KCNC1-213ENST00000640909 PIK3C2BO00750 1634 aa23.61■■□□□ 1.37
KCNC1-213ENST00000640909 JCADQ9P266 1359 aa23.61■■□□□ 1.37
KCNC1-213ENST00000640909 TMEM2Q9UHN6 1383 aa23.6■■□□□ 1.37
KCNC1-213ENST00000640909 CFAP65Q6ZU64 1925 aaKnown RBP23.59■■□□□ 1.37
KCNC1-213ENST00000640909 KCNA6P17658 529 aa23.57■■□□□ 1.36
KCNC1-213ENST00000640909 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
KCNC1-213ENST00000640909 TET3O43151 1660 aa23.57■■□□□ 1.36
KCNC1-213ENST00000640909 DUOX2Q9NRD8 1548 aa23.56■■□□□ 1.36
KCNC1-213ENST00000640909 EFCAB6Q5THR3 1501 aa23.55■■□□□ 1.36
KCNC1-213ENST00000640909 UPF1Q92900 1129 aaKnown RBP eCLIP23.55■■□□□ 1.36
KCNC1-213ENST00000640909 COL16A1Q07092 1604 aaPredicted RBP23.55■■□□□ 1.36
KCNC1-213ENST00000640909 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
KCNC1-213ENST00000640909 MSH6P52701 1360 aa23.53■■□□□ 1.36
KCNC1-213ENST00000640909 PROSER2Q86WR7 435 aaPredicted RBP23.51■■□□□ 1.35
KCNC1-213ENST00000640909 SPATA31A6Q5VVP1 1343 aa23.51■■□□□ 1.35
KCNC1-213ENST00000640909 ZNF772Q68DY9 489 aaPredicted RBP23.5■■□□□ 1.35
KCNC1-213ENST00000640909 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
KCNC1-213ENST00000640909 ERBINQ96RT1 1412 aa23.48■■□□□ 1.35
KCNC1-213ENST00000640909 SHPRHQ149N8 1683 aa23.48■■□□□ 1.35
KCNC1-213ENST00000640909 SLAIN2Q9P270 581 aa23.47■■□□□ 1.35
KCNC1-213ENST00000640909 LRP6O75581 1613 aa23.47■■□□□ 1.35
KCNC1-213ENST00000640909 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.34
KCNC1-213ENST00000640909 ADGRB3O60242 1522 aa23.44■■□□□ 1.34
KCNC1-213ENST00000640909 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
KCNC1-213ENST00000640909 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
KCNC1-213ENST00000640909 LMTK2Q8IWU2 1503 aa23.43■■□□□ 1.34
KCNC1-213ENST00000640909 CHD2O14647 1828 aaKnown RBP23.41■■□□□ 1.34
KCNC1-213ENST00000640909 SLC26A8Q96RN1 970 aa23.41■■□□□ 1.34
KCNC1-213ENST00000640909 MYOM3Q5VTT5 1437 aa23.41■■□□□ 1.34
KCNC1-213ENST00000640909 CROCC2H7BZ55 1655 aa23.39■■□□□ 1.34
KCNC1-213ENST00000640909 MEX3CQ5U5Q3 659 aaKnown RBP23.39■■□□□ 1.33
KCNC1-213ENST00000640909 KANK1Q14678 1352 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms