RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 PRDM2Q13029 1718 aa11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 WASHC2AQ641Q2 1341 aa11.91□□□□□ -0.5
CACNA1D-230ENST00000640483 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
CACNA1D-230ENST00000640483 RAB3GAP2Q9H2M9 1393 aa11.91□□□□□ -0.5
CACNA1D-230ENST00000640483 TAF7LQ5H9L4 462 aa11.9□□□□□ -0.5
CACNA1D-230ENST00000640483 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
CACNA1D-230ENST00000640483 CUL7Q14999 1698 aa11.9□□□□□ -0.5
CACNA1D-230ENST00000640483 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
CACNA1D-230ENST00000640483 CTDP1Q9Y5B0 961 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-230ENST00000640483 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
CACNA1D-230ENST00000640483 PSME1Q06323 249 aa11.88□□□□□ -0.51
CACNA1D-230ENST00000640483 RALBP1Q15311 655 aa11.88□□□□□ -0.51
CACNA1D-230ENST00000640483 COG3Q96JB2 828 aa11.88□□□□□ -0.51
CACNA1D-230ENST00000640483 EVC2Q86UK5 1308 aa11.88□□□□□ -0.51
CACNA1D-230ENST00000640483 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
CACNA1D-230ENST00000640483 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
CACNA1D-230ENST00000640483 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
CACNA1D-230ENST00000640483 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
CACNA1D-230ENST00000640483 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
CACNA1D-230ENST00000640483 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
CACNA1D-230ENST00000640483 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
CACNA1D-230ENST00000640483 MCCP23508 829 aa11.86□□□□□ -0.51
CACNA1D-230ENST00000640483 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
CACNA1D-230ENST00000640483 KIF21BO75037 1637 aa11.85□□□□□ -0.51
CACNA1D-230ENST00000640483 PPP1R1BQ9UD71 204 aaPredicted RBP11.85□□□□□ -0.51
CACNA1D-230ENST00000640483 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
CACNA1D-230ENST00000640483 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
CACNA1D-230ENST00000640483 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
CACNA1D-230ENST00000640483 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
CACNA1D-230ENST00000640483 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
CACNA1D-230ENST00000640483 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
CACNA1D-230ENST00000640483 RGS3P49796 1198 aa11.83□□□□□ -0.52
CACNA1D-230ENST00000640483 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
CACNA1D-230ENST00000640483 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
CACNA1D-230ENST00000640483 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
CACNA1D-230ENST00000640483 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
CACNA1D-230ENST00000640483 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
CACNA1D-230ENST00000640483 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
CACNA1D-230ENST00000640483 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CACNA1D-230ENST00000640483 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
CACNA1D-230ENST00000640483 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
CACNA1D-230ENST00000640483 POGZQ7Z3K3 1410 aa11.8□□□□□ -0.52
CACNA1D-230ENST00000640483 TPRNQ4KMQ1 711 aa11.8□□□□□ -0.52
CACNA1D-230ENST00000640483 KIAA1211Q6ZU35 1233 aa11.8□□□□□ -0.52
CACNA1D-230ENST00000640483 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
CACNA1D-230ENST00000640483 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
CACNA1D-230ENST00000640483 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
CACNA1D-230ENST00000640483 APBB1O00213 710 aa11.79□□□□□ -0.52
CACNA1D-230ENST00000640483 ITPRIPQ8IWB1 547 aa11.79□□□□□ -0.52
CACNA1D-230ENST00000640483 SYTL4Q96C24 671 aaPredicted RBP11.79□□□□□ -0.52
CACNA1D-230ENST00000640483 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
CACNA1D-230ENST00000640483 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
CACNA1D-230ENST00000640483 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
CACNA1D-230ENST00000640483 TEFQ10587 303 aa11.78□□□□□ -0.52
CACNA1D-230ENST00000640483 KIF15Q9NS87 1388 aa11.77□□□□□ -0.52
CACNA1D-230ENST00000640483 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.52
CACNA1D-230ENST00000640483 HMMRO75330 724 aa11.77□□□□□ -0.53
CACNA1D-230ENST00000640483 THEMISQ8N1K5 641 aaPredicted RBP11.77□□□□□ -0.53
CACNA1D-230ENST00000640483 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
CACNA1D-230ENST00000640483 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
CACNA1D-230ENST00000640483 SLC4A10Q6U841 1118 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 TXNDC2Q86VQ3 553 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 IQGAP2Q13576 1575 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 SMC4Q9NTJ3 1288 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 NOL10Q9BSC4 688 aaKnown RBP11.75□□□□□ -0.53
CACNA1D-230ENST00000640483 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
CACNA1D-230ENST00000640483 GPRASP1Q5JY77 1395 aa11.74□□□□□ -0.53
CACNA1D-230ENST00000640483 NBR1Q14596 966 aa11.74□□□□□ -0.53
CACNA1D-230ENST00000640483 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
CACNA1D-230ENST00000640483 PHLDB1Q86UU1 1377 aa11.73□□□□□ -0.53
CACNA1D-230ENST00000640483 RAPGEF4Q8WZA2 1011 aa11.73□□□□□ -0.53
CACNA1D-230ENST00000640483 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
CACNA1D-230ENST00000640483 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
CACNA1D-230ENST00000640483 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
CACNA1D-230ENST00000640483 AFAP1Q8N556 730 aa11.72□□□□□ -0.53
CACNA1D-230ENST00000640483 PLEKHH2Q8IVE3 1493 aa11.72□□□□□ -0.53
CACNA1D-230ENST00000640483 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 NLRP13Q86W25 1043 aa11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 PTMAP06454 111 aaKnown RBP11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 MIA2Q96PC5 1412 aa11.71□□□□□ -0.53
CACNA1D-230ENST00000640483 WDHD1O75717 1129 aaPredicted RBP11.71□□□□□ -0.54
CACNA1D-230ENST00000640483 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.54
CACNA1D-230ENST00000640483 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.54
CACNA1D-230ENST00000640483 PANK3Q9H999 370 aa11.71□□□□□ -0.54
CACNA1D-230ENST00000640483 HSCBQ8IWL3 235 aa11.7□□□□□ -0.54
CACNA1D-230ENST00000640483 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
CACNA1D-230ENST00000640483 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
CACNA1D-230ENST00000640483 NLRP2Q9NX02 1062 aa11.69□□□□□ -0.54
CACNA1D-230ENST00000640483 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
CACNA1D-230ENST00000640483 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
CACNA1D-230ENST00000640483 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
CACNA1D-230ENST00000640483 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
CACNA1D-230ENST00000640483 ZNF644Q9H582 1327 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms