RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 RGS17Q9UGC6 210 aaPredicted RBP18.9■□□□□ 0.62
MECP2-226ENST00000640414 TNRQ92752 1358 aa18.9■□□□□ 0.62
MECP2-226ENST00000640414 FBXO31Q5XUX0 539 aaPredicted RBP18.89■□□□□ 0.61
MECP2-226ENST00000640414 ANKLE2Q86XL3 938 aa18.88■□□□□ 0.61
MECP2-226ENST00000640414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
MECP2-226ENST00000640414 PLEKHH2Q8IVE3 1493 aa18.88■□□□□ 0.61
MECP2-226ENST00000640414 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
MECP2-226ENST00000640414 MED14O60244 1454 aa18.86■□□□□ 0.61
MECP2-226ENST00000640414 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
MECP2-226ENST00000640414 STRCP1A6NGW2 1772 aa18.85■□□□□ 0.61
MECP2-226ENST00000640414 LRRC7Q96NW7 1537 aa18.84■□□□□ 0.61
MECP2-226ENST00000640414 PZPP20742 1482 aa18.84■□□□□ 0.61
MECP2-226ENST00000640414 DEPDC5O75140 1603 aa18.84■□□□□ 0.61
MECP2-226ENST00000640414 RNF17Q9BXT8 1623 aaKnown RBP18.84■□□□□ 0.61
MECP2-226ENST00000640414 THEMISQ8N1K5 641 aaPredicted RBP18.82■□□□□ 0.6
MECP2-226ENST00000640414 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
MECP2-226ENST00000640414 UGGT1Q9NYU2 1555 aa18.81■□□□□ 0.6
MECP2-226ENST00000640414 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
MECP2-226ENST00000640414 SYNMO15061 1565 aa18.8■□□□□ 0.6
MECP2-226ENST00000640414 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
MECP2-226ENST00000640414 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
MECP2-226ENST00000640414 MIA2Q96PC5 1412 aa18.79■□□□□ 0.6
MECP2-226ENST00000640414 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
MECP2-226ENST00000640414 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
MECP2-226ENST00000640414 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
MECP2-226ENST00000640414 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
MECP2-226ENST00000640414 MBD5Q9P267 1494 aa18.77■□□□□ 0.59
MECP2-226ENST00000640414 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
MECP2-226ENST00000640414 KIF3BO15066 747 aa18.76■□□□□ 0.59
MECP2-226ENST00000640414 POTEAQ6S8J7 498 aa18.75■□□□□ 0.59
MECP2-226ENST00000640414 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
MECP2-226ENST00000640414 ZC3H13Q5T200 1668 aaKnown RBP18.72■□□□□ 0.59
MECP2-226ENST00000640414 TIAM1Q13009 1591 aa18.7■□□□□ 0.58
MECP2-226ENST00000640414 XIRP1Q702N8 1843 aaKnown RBP18.68■□□□□ 0.58
MECP2-226ENST00000640414 SETD1AO15047 1707 aaKnown RBP18.67■□□□□ 0.58
MECP2-226ENST00000640414 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
MECP2-226ENST00000640414 FAM135BQ49AJ0 1406 aa18.65■□□□□ 0.58
MECP2-226ENST00000640414 CCDC141Q6ZP82 1450 aa18.64■□□□□ 0.57
MECP2-226ENST00000640414 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
MECP2-226ENST00000640414 UBR1Q8IWV7 1749 aa18.62■□□□□ 0.57
MECP2-226ENST00000640414 ABCC3O15438 1527 aa18.61■□□□□ 0.57
MECP2-226ENST00000640414 ERVK-7P63135 1459 aa18.61■□□□□ 0.57
MECP2-226ENST00000640414 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
MECP2-226ENST00000640414 LTKP29376 864 aa18.59■□□□□ 0.57
MECP2-226ENST00000640414 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
MECP2-226ENST00000640414 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.56
MECP2-226ENST00000640414 ROBO1Q9Y6N7 1651 aa18.57■□□□□ 0.56
MECP2-226ENST00000640414 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
MECP2-226ENST00000640414 SLIT1O75093 1534 aa18.56■□□□□ 0.56
MECP2-226ENST00000640414 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
MECP2-226ENST00000640414 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
MECP2-226ENST00000640414 TXNDC2Q86VQ3 553 aa18.55■□□□□ 0.56
MECP2-226ENST00000640414 TMEM94Q12767 1356 aa18.54■□□□□ 0.56
MECP2-226ENST00000640414 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
MECP2-226ENST00000640414 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.55
MECP2-226ENST00000640414 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
MECP2-226ENST00000640414 CEP152O94986 1710 aa18.51■□□□□ 0.55
MECP2-226ENST00000640414 CFAP65Q6ZU64 1925 aaKnown RBP18.51■□□□□ 0.55
MECP2-226ENST00000640414 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.555e-7■■□□□ 11.4
MECP2-226ENST00000640414 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
MECP2-226ENST00000640414 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
MECP2-226ENST00000640414 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
MECP2-226ENST00000640414 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
MECP2-226ENST00000640414 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
MECP2-226ENST00000640414 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
MECP2-226ENST00000640414 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
MECP2-226ENST00000640414 JCADQ9P266 1359 aa18.46■□□□□ 0.55
MECP2-226ENST00000640414 KCNA6P17658 529 aa18.45■□□□□ 0.54
MECP2-226ENST00000640414 PIK3C2BO00750 1634 aa18.45■□□□□ 0.54
MECP2-226ENST00000640414 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
MECP2-226ENST00000640414 MAST1Q9Y2H9 1570 aa18.44■□□□□ 0.54
MECP2-226ENST00000640414 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
MECP2-226ENST00000640414 PRDM15P57071 1507 aaPredicted RBP18.43■□□□□ 0.54
MECP2-226ENST00000640414 LRP6O75581 1613 aa18.42■□□□□ 0.54
MECP2-226ENST00000640414 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
MECP2-226ENST00000640414 ARHGAP31Q2M1Z3 1444 aa18.41■□□□□ 0.54
MECP2-226ENST00000640414 TET3O43151 1660 aa18.41■□□□□ 0.54
MECP2-226ENST00000640414 COL16A1Q07092 1604 aaPredicted RBP18.41■□□□□ 0.54
MECP2-226ENST00000640414 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
MECP2-226ENST00000640414 SLC26A8Q96RN1 970 aa18.4■□□□□ 0.54
MECP2-226ENST00000640414 SLAIN2Q9P270 581 aa18.4■□□□□ 0.54
MECP2-226ENST00000640414 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.54
MECP2-226ENST00000640414 MSH6P52701 1360 aa18.39■□□□□ 0.53
MECP2-226ENST00000640414 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
MECP2-226ENST00000640414 EFCAB6Q5THR3 1501 aa18.38■□□□□ 0.53
MECP2-226ENST00000640414 KDM5AP29375 1690 aaKnown RBP18.36■□□□□ 0.53
MECP2-226ENST00000640414 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
MECP2-226ENST00000640414 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
MECP2-226ENST00000640414 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
MECP2-226ENST00000640414 DUOX2Q9NRD8 1548 aa18.34■□□□□ 0.53
MECP2-226ENST00000640414 FGD6Q6ZV73 1430 aa18.34■□□□□ 0.53
MECP2-226ENST00000640414 IDI1Q13907 227 aa18.32■□□□□ 0.52
MECP2-226ENST00000640414 RXRBP28702 533 aa18.31■□□□□ 0.52
MECP2-226ENST00000640414 CDK12Q9NYV4 1490 aaPredicted RBP18.3■□□□□ 0.52
MECP2-226ENST00000640414 SHPRHQ149N8 1683 aa18.3■□□□□ 0.52
MECP2-226ENST00000640414 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.52
MECP2-226ENST00000640414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.52
MECP2-226ENST00000640414 ADGRB3O60242 1522 aa18.27■□□□□ 0.51
MECP2-226ENST00000640414 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
MECP2-226ENST00000640414 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms