RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-233	ENST00000638888	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.85	□□□□□ -0.51
STRADA-233	ENST00000638888	MAGI2	Q86UL8	1455 aa		11.85	□□□□□ -0.51
STRADA-233	ENST00000638888	DHX29	Q7Z478	1369 aa	Known RBP	11.84	□□□□□ -0.51
STRADA-233	ENST00000638888	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
STRADA-233	ENST00000638888	TRPM1	Q7Z4N2	1603 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	DUOX2	Q9NRD8	1548 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888		E9PCH4	1651 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	LAMC1	P11047	1609 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	NEFL	P07196	543 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	CCDC184	Q52MB2	194 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	PLCH2	O75038	1416 aa		11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	ROCK2	O75116	1388 aa	Known RBP	11.82	□□□□□ -0.52
STRADA-233	ENST00000638888	ABCC1	P33527	1531 aa		11.81	□□□□□ -0.52
STRADA-233	ENST00000638888	ARAP3	Q8WWN8	1544 aa		11.81	□□□□□ -0.52
STRADA-233	ENST00000638888	ATP10A	O60312	1499 aa		11.81	□□□□□ -0.52
STRADA-233	ENST00000638888	ERBIN	Q96RT1	1412 aa		11.8	□□□□□ -0.52
STRADA-233	ENST00000638888	PLA2R1	Q13018	1463 aa		11.8	□□□□□ -0.52
STRADA-233	ENST00000638888	ZBED9	Q6R2W3	1325 aa		11.79	□□□□□ -0.52
STRADA-233	ENST00000638888	PRAG1	Q86YV5	1406 aa		11.78	□□□□□ -0.52
STRADA-233	ENST00000638888	CCDC144A	A2RUR9	1427 aa		11.78	□□□□□ -0.52
STRADA-233	ENST00000638888	GPRASP1	Q5JY77	1395 aa		11.77	□□□□□ -0.53
STRADA-233	ENST00000638888	MRS2	Q9HD23	443 aa		11.77	□□□□□ -0.53
STRADA-233	ENST00000638888	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.76	□□□□□ -0.53
STRADA-233	ENST00000638888	BCAN	Q96GW7	911 aa		11.76	□□□□□ -0.53
STRADA-233	ENST00000638888	CARD11	Q9BXL7	1154 aa		11.76	□□□□□ -0.53
STRADA-233	ENST00000638888	A2M	P01023	1474 aa		11.76	□□□□□ -0.53
STRADA-233	ENST00000638888	ZNF326	Q5BKZ1	582 aa	Known RBP	11.75	□□□□□ -0.53
STRADA-233	ENST00000638888	PRDM15	P57071	1507 aa	Predicted RBP	11.75	□□□□□ -0.53
STRADA-233	ENST00000638888	ERICH6B	Q5W0A0	696 aa		11.74	□□□□□ -0.53
STRADA-233	ENST00000638888	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.74	□□□□□ -0.53
STRADA-233	ENST00000638888	DCAF11	Q8TEB1	546 aa		11.74	□□□□□ -0.53
STRADA-233	ENST00000638888	KTN1	Q86UP2	1357 aa	Known RBP	11.73	□□□□□ -0.53
STRADA-233	ENST00000638888	DEPDC5	O75140	1603 aa		11.73	□□□□□ -0.53
STRADA-233	ENST00000638888	RNF17	Q9BXT8	1623 aa	Known RBP	11.73	□□□□□ -0.53
STRADA-233	ENST00000638888	ABCA9	Q8IUA7	1624 aa		11.73	□□□□□ -0.53
STRADA-233	ENST00000638888	ZFYVE16	Q7Z3T8	1539 aa		11.72	□□□□□ -0.53
STRADA-233	ENST00000638888	EFCAB2	Q5VUJ9	269 aa		11.72	□□□□□ -0.53
STRADA-233	ENST00000638888	TRAPPC8	Q9Y2L5	1435 aa		11.72	□□□□□ -0.53
STRADA-233	ENST00000638888	FAM9B	Q8IZU0	186 aa		11.72	□□□□□ -0.53
STRADA-233	ENST00000638888	BCL11A	Q9H165	835 aa		11.72	□□□□□ -0.53
STRADA-233	ENST00000638888	ST20-MTHFS	A0A0A6YYL1	179 aa		11.71	□□□□□ -0.54
STRADA-233	ENST00000638888	KDM2A	Q9Y2K7	1162 aa		11.71	□□□□□ -0.54
STRADA-233	ENST00000638888	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.7	□□□□□ -0.54
STRADA-233	ENST00000638888	INO80	Q9ULG1	1556 aa	Predicted RBP	11.7	□□□□□ -0.54
STRADA-233	ENST00000638888	CEP152	O94986	1710 aa		11.7	□□□□□ -0.54
STRADA-233	ENST00000638888	TRPM2	O94759	1503 aa		11.69	□□□□□ -0.54
STRADA-233	ENST00000638888	SPHKAP	Q2M3C7	1700 aa		11.69	□□□□□ -0.54
STRADA-233	ENST00000638888	VWDE	Q8N2E2	1590 aa		11.69	□□□□□ -0.54
STRADA-233	ENST00000638888	WDR7	Q9Y4E6	1490 aa		11.69	□□□□□ -0.54
STRADA-233	ENST00000638888	TET3	O43151	1660 aa		11.68	□□□□□ -0.54
STRADA-233	ENST00000638888	SMG6	Q86US8	1419 aa	Known RBP	11.68	□□□□□ -0.54
STRADA-233	ENST00000638888	LRPPRC	P42704	1394 aa	Known RBP	11.68	□□□□□ -0.54
STRADA-233	ENST00000638888	MADD	Q8WXG6	1647 aa		11.67	□□□□□ -0.54
STRADA-233	ENST00000638888	NEURL4	Q96JN8	1562 aa		11.67	□□□□□ -0.54
STRADA-233	ENST00000638888	ILDR1	Q86SU0	546 aa	Predicted RBP	11.67	□□□□□ -0.54
STRADA-233	ENST00000638888	PTPRT	O14522	1441 aa		11.67	□□□□□ -0.54
STRADA-233	ENST00000638888	BRD4	O60885	1362 aa	Predicted RBP	11.67	□□□□□ -0.54
STRADA-233	ENST00000638888	RALBP1	Q15311	655 aa		11.66	□□□□□ -0.54
STRADA-233	ENST00000638888	PNISR	Q8TF01	805 aa	Known RBP	11.66	□□□□□ -0.54
STRADA-233	ENST00000638888	IQGAP1	P46940	1657 aa		11.66	□□□□□ -0.54
STRADA-233	ENST00000638888	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
STRADA-233	ENST00000638888	ATP7A	Q04656	1500 aa		11.65	□□□□□ -0.54
STRADA-233	ENST00000638888	PARD3	Q8TEW0	1356 aa		11.65	□□□□□ -0.54
STRADA-233	ENST00000638888	SPAG9	O60271	1321 aa	Known RBP	11.64	□□□□□ -0.55
STRADA-233	ENST00000638888	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.64	□□□□□ -0.55
STRADA-233	ENST00000638888	NBPF1	Q3BBV0	1214 aa		11.64	□□□□□ -0.55
STRADA-233	ENST00000638888	TESK2	Q96S53	571 aa		11.64	□□□□□ -0.55
STRADA-233	ENST00000638888	POLR3GL	Q9BT43	218 aa		11.64	□□□□□ -0.55
STRADA-233	ENST00000638888	CLTCL1	P53675	1640 aa		11.63	□□□□□ -0.55
STRADA-233	ENST00000638888	KIAA1210	Q9ULL0	1709 aa		11.63	□□□□□ -0.55
STRADA-233	ENST00000638888	RNF123	Q5XPI4	1314 aa		11.63	□□□□□ -0.55
STRADA-233	ENST00000638888	FANCA	O15360	1455 aa		11.63	□□□□□ -0.55
STRADA-233	ENST00000638888	MROH1	Q8NDA8	1641 aa		11.63	□□□□□ -0.55
STRADA-233	ENST00000638888	PPP4R2	Q9NY27	417 aa		11.63	□□□□□ -0.55
STRADA-233	ENST00000638888	ZMYM4	Q5VZL5	1548 aa		11.62	□□□□□ -0.55
STRADA-233	ENST00000638888	WASHC2C	Q9Y4E1	1318 aa		11.62	□□□□□ -0.55
STRADA-233	ENST00000638888	PER1	O15534	1290 aa	Predicted RBP	11.62	□□□□□ -0.55
STRADA-233	ENST00000638888	RGL3	Q3MIN7	710 aa		11.62	□□□□□ -0.55
STRADA-233	ENST00000638888	STAC3	Q96MF2	364 aa		11.62	□□□□□ -0.55
STRADA-233	ENST00000638888	NUDC	Q9Y266	331 aa		11.61	□□□□□ -0.55
STRADA-233	ENST00000638888	INSR	P06213	1382 aa		11.61	□□□□□ -0.55
STRADA-233	ENST00000638888	DISP3	Q9P2K9	1392 aa		11.61	□□□□□ -0.55
STRADA-233	ENST00000638888	SCAPER	Q9BY12	1400 aa		11.61	□□□□□ -0.55
STRADA-233	ENST00000638888	TMC1	Q8TDI8	760 aa		11.6	□□□□□ -0.55
STRADA-233	ENST00000638888	RBM19	Q9Y4C8	960 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-233	ENST00000638888	IRX6	P78412	446 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-233	ENST00000638888	AFAP1	Q8N556	730 aa		11.6	□□□□□ -0.55
STRADA-233	ENST00000638888	KIDINS220	Q9ULH0	1771 aa		11.6	□□□□□ -0.55
STRADA-233	ENST00000638888	ADGRL1	O94910	1474 aa		11.59	□□□□□ -0.55
STRADA-233	ENST00000638888	IFT172	Q9UG01	1749 aa		11.58	□□□□□ -0.56
STRADA-233	ENST00000638888	ASXL2	Q76L83	1435 aa		11.58	□□□□□ -0.56
STRADA-233	ENST00000638888	NLRP13	Q86W25	1043 aa		11.57	□□□□□ -0.56
STRADA-233	ENST00000638888	LMTK2	Q8IWU2	1503 aa		11.57	□□□□□ -0.56
STRADA-233	ENST00000638888	TMF1	P82094	1093 aa		11.57	□□□□□ -0.56
STRADA-233	ENST00000638888	SYNM	O15061	1565 aa		11.57	□□□□□ -0.56
STRADA-233	ENST00000638888	MYOM2	P54296	1465 aa		11.56	□□□□□ -0.56
STRADA-233	ENST00000638888	SCAF11	Q99590	1463 aa	Known RBP	11.56	□□□□□ -0.56
STRADA-233	ENST00000638888	KANK1	Q14678	1352 aa		11.56	□□□□□ -0.56
STRADA-233	ENST00000638888	EFCAB6	Q5THR3	1501 aa		11.56	□□□□□ -0.56
STRADA-233	ENST00000638888	KIF1B	O60333	1816 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms