RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 ABCA6Q8N139 1617 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 ARHGEF5Q12774 1597 aa4.46□□□□□ -1.69
NEK1-209ENST00000638824 FAM50AQ14320 339 aaKnown RBP4.46□□□□□ -1.69
NEK1-209ENST00000638824 DENND4BO75064 1496 aaPredicted RBP4.46□□□□□ -1.69
NEK1-209ENST00000638824 ADGBQ8N7X0 1667 aa4.46□□□□□ -1.69
NEK1-209ENST00000638824 ZFYVE16Q7Z3T8 1539 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 ZNF518AQ6AHZ1 1483 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 KDM2AQ9Y2K7 1162 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.7
NEK1-209ENST00000638824 ZMYM4Q5VZL5 1548 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 CCDC141Q6ZP82 1450 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 PLEKHH2Q8IVE3 1493 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 AFAP1Q8N556 730 aa4.46□□□□□ -1.7
NEK1-209ENST00000638824 ATP7AQ04656 1500 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 ARHGEF40Q8TER5 1519 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 DAPK1P53355 1430 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 YEATS2Q9ULM3 1422 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 KIAA1107Q9UPP5 1409 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 PLEKHG5O94827 1062 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 DIP2CQ9Y2E4 1556 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 ITGAEP38570 1179 aa4.45□□□□□ -1.7
NEK1-209ENST00000638824 ABCC5O15440 1437 aa4.44□□□□□ -1.7
NEK1-209ENST00000638824 PTPRKQ15262 1439 aa4.44□□□□□ -1.7
NEK1-209ENST00000638824 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
NEK1-209ENST00000638824 C9orf84Q5VXU9 1444 aa4.44□□□□□ -1.7
NEK1-209ENST00000638824 PLXNC1O60486 1568 aa4.44□□□□□ -1.7
NEK1-209ENST00000638824 SHANK2Q9UPX8 1470 aa4.43□□□□□ -1.7
NEK1-209ENST00000638824 FKBP8Q14318 412 aa4.43□□□□□ -1.7
NEK1-209ENST00000638824 CHIC2Q9UKJ5 165 aa4.43□□□□□ -1.7
NEK1-209ENST00000638824 MYT1LQ9UL68 1186 aa4.43□□□□□ -1.7
NEK1-209ENST00000638824 SPAG9O60271 1321 aaKnown RBP4.43□□□□□ -1.7
NEK1-209ENST00000638824 MLH3Q9UHC1 1453 aa4.43□□□□□ -1.7
NEK1-209ENST00000638824 GCC2Q8IWJ2 1684 aa4.42□□□□□ -1.7
NEK1-209ENST00000638824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.42□□□□□ -1.7
NEK1-209ENST00000638824 ADGRL2O95490 1459 aa4.41□□□□□ -1.7
NEK1-209ENST00000638824 MAGI2Q86UL8 1455 aa4.41□□□□□ -1.7
NEK1-209ENST00000638824 EIF5BO60841 1220 aaKnown RBP4.41□□□□□ -1.7
NEK1-209ENST00000638824 TMEM132AQ24JP5 1023 aa4.41□□□□□ -1.7
NEK1-209ENST00000638824 KIF15Q9NS87 1388 aa4.41□□□□□ -1.7
NEK1-209ENST00000638824 RTEL1-TNFRSF6BF6WH68 1400 aa4.41□□□□□ -1.7
NEK1-209ENST00000638824 TSPY4P0CV99 314 aa4.4□□□□□ -1.7
NEK1-209ENST00000638824 TSPY10P0CW01 314 aa4.4□□□□□ -1.7
NEK1-209ENST00000638824 TRIM26Q12899 539 aaPredicted RBP4.4□□□□□ -1.7
NEK1-209ENST00000638824 RRP7BPQ9NSQ0 103 aa4.4□□□□□ -1.7
NEK1-209ENST00000638824 ATP10AO60312 1499 aa4.4□□□□□ -1.7
NEK1-209ENST00000638824 A2MP01023 1474 aa4.4□□□□□ -1.7
NEK1-209ENST00000638824 REREQ9P2R6 1566 aa4.4□□□□□ -1.7
NEK1-209ENST00000638824 NCOA1Q15788 1441 aa4.4□□□□□ -1.71
NEK1-209ENST00000638824 BCORL1Q5H9F3 1711 aa4.4□□□□□ -1.71
NEK1-209ENST00000638824 DUOX2Q9NRD8 1548 aa4.4□□□□□ -1.71
NEK1-209ENST00000638824 MROH1Q8NDA8 1641 aa4.4□□□□□ -1.71
NEK1-209ENST00000638824 EIF2AK4Q9P2K8 1649 aaKnown RBP4.4□□□□□ -1.71
NEK1-209ENST00000638824 CEP152O94986 1710 aa4.4□□□□□ -1.71
NEK1-209ENST00000638824 FER1L4A9Z1Z3 1794 aa4.4□□□□□ -1.71
NEK1-209ENST00000638824 ANKRD30AQ9BXX3 1397 aa4.39□□□□□ -1.71
NEK1-209ENST00000638824 RSPH4AQ5TD94 716 aa4.39□□□□□ -1.71
NEK1-209ENST00000638824 NPM2Q86SE8 214 aaKnown RBP4.39□□□□□ -1.71
NEK1-209ENST00000638824 RNF17Q9BXT8 1623 aaKnown RBP4.39□□□□□ -1.71
NEK1-209ENST00000638824 DEPDC5O75140 1603 aa4.39□□□□□ -1.71
NEK1-209ENST00000638824 MADDQ8WXG6 1647 aa4.39□□□□□ -1.71
NEK1-209ENST00000638824 NAIPQ13075 1403 aa4.39□□□□□ -1.71
NEK1-209ENST00000638824 CLTCQ00610 1675 aaKnown RBP4.39□□□□□ -1.71
NEK1-209ENST00000638824 ROCK1Q13464 1354 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 RIMS1Q86UR5 1692 aaKnown RBP4.38□□□□□ -1.71
NEK1-209ENST00000638824 HFM1A2PYH4 1435 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 ARID4BQ4LE39 1312 aaPredicted RBP4.38□□□□□ -1.71
NEK1-209ENST00000638824 UNC13BO14795 1591 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 MLECQ14165 292 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 C14orf37Q86TY3 774 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 AGLP35573 1532 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 ERBINQ96RT1 1412 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 ANKRD50Q9ULJ7 1429 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 ADAMTSL3P82987 1691 aa4.38□□□□□ -1.71
NEK1-209ENST00000638824 DHX29Q7Z478 1369 aaKnown RBP4.38□□□□□ -1.71
NEK1-209ENST00000638824 PRDM15P57071 1507 aaPredicted RBP4.38□□□□□ -1.71
NEK1-209ENST00000638824 CFAP65Q6ZU64 1925 aaKnown RBP4.37□□□□□ -1.71
NEK1-209ENST00000638824 MKRN4PQ13434 485 aaPredicted RBP4.37□□□□□ -1.71
NEK1-209ENST00000638824 KIF3BO15066 747 aa4.37□□□□□ -1.71
NEK1-209ENST00000638824 CAMSAP1Q5T5Y3 1602 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 HRCP23327 699 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 GGT6Q6P531 493 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 PCGF6Q9BYE7 350 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 C3P01024 1663 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 ZC3H13Q5T200 1668 aaKnown RBP4.36□□□□□ -1.71
NEK1-209ENST00000638824 IQGAP3Q86VI3 1631 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 KDM5DQ9BY66 1539 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 ILDR1Q86SU0 546 aaPredicted RBP4.36□□□□□ -1.71
NEK1-209ENST00000638824 RAB3GAP2Q9H2M9 1393 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 ABCC3O15438 1527 aa4.36□□□□□ -1.71
NEK1-209ENST00000638824 MYT1Q01538 1121 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 VWDEQ8N2E2 1590 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 MROH2AA6NES4 1674 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 SETD5Q9C0A6 1442 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 E9PCH4 1651 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 FAM135AQ9P2D6 1515 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 TET3O43151 1660 aa4.35□□□□□ -1.71
NEK1-209ENST00000638824 AKT1S1Q96B36 256 aa4.34□□□□□ -1.71
NEK1-209ENST00000638824 EFCAB6Q5THR3 1501 aa4.34□□□□□ -1.71
NEK1-209ENST00000638824 PZPP20742 1482 aa4.34□□□□□ -1.71
NEK1-209ENST00000638824 PREX1Q8TCU6 1659 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms