RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 PTPRKQ15262 1439 aa19.4■□□□□ 0.7
GFAP-227ENST00000638400 KIF15Q9NS87 1388 aa19.39■□□□□ 0.69
GFAP-227ENST00000638400 DUOX2Q9NRD8 1548 aa19.39■□□□□ 0.69
GFAP-227ENST00000638400 CROCC2H7BZ55 1655 aa19.39■□□□□ 0.69
GFAP-227ENST00000638400 EIF2AK4Q9P2K8 1649 aaKnown RBP19.37■□□□□ 0.69
GFAP-227ENST00000638400 WASHC2CQ9Y4E1 1318 aa19.37■□□□□ 0.69
GFAP-227ENST00000638400 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
GFAP-227ENST00000638400 ERBINQ96RT1 1412 aa19.35■□□□□ 0.69
GFAP-227ENST00000638400 FAM50AQ14320 339 aaKnown RBP19.35■□□□□ 0.69
GFAP-227ENST00000638400 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
GFAP-227ENST00000638400 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
GFAP-227ENST00000638400 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
GFAP-227ENST00000638400 PZPP20742 1482 aa19.34■□□□□ 0.69
GFAP-227ENST00000638400 ABCC3O15438 1527 aa19.31■□□□□ 0.68
GFAP-227ENST00000638400 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
GFAP-227ENST00000638400 MYO3AQ8NEV4 1616 aa19.31■□□□□ 0.68
GFAP-227ENST00000638400 MROH1Q8NDA8 1641 aa19.3■□□□□ 0.68
GFAP-227ENST00000638400 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
GFAP-227ENST00000638400 NCOA1Q15788 1441 aa19.29■□□□□ 0.68
GFAP-227ENST00000638400 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
GFAP-227ENST00000638400 TNRQ92752 1358 aa19.29■□□□□ 0.68
GFAP-227ENST00000638400 ZC3H13Q5T200 1668 aaKnown RBP19.28■□□□□ 0.68
GFAP-227ENST00000638400 PRDM15P57071 1507 aaPredicted RBP19.28■□□□□ 0.68
GFAP-227ENST00000638400 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.68
GFAP-227ENST00000638400 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
GFAP-227ENST00000638400 FBXO31Q5XUX0 539 aaPredicted RBP19.27■□□□□ 0.68
GFAP-227ENST00000638400 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
GFAP-227ENST00000638400 A2ML1A8K2U0 1454 aa19.26■□□□□ 0.67
GFAP-227ENST00000638400 CAMSAP1Q5T5Y3 1602 aa19.25■□□□□ 0.67
GFAP-227ENST00000638400 PLA2R1Q13018 1463 aa19.23■□□□□ 0.67
GFAP-227ENST00000638400 ILDR1Q86SU0 546 aaPredicted RBP19.23■□□□□ 0.67
GFAP-227ENST00000638400 STRCQ7RTU9 1775 aa19.23■□□□□ 0.67
GFAP-227ENST00000638400 PTPRTO14522 1441 aa19.23■□□□□ 0.67
GFAP-227ENST00000638400 DEPDC5O75140 1603 aa19.22■□□□□ 0.67
GFAP-227ENST00000638400 KANK1Q14678 1352 aa19.22■□□□□ 0.67
GFAP-227ENST00000638400 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
GFAP-227ENST00000638400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.67
GFAP-227ENST00000638400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
GFAP-227ENST00000638400 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
GFAP-227ENST00000638400 ERVK-7P63135 1459 aa19.2■□□□□ 0.66
GFAP-227ENST00000638400 SPATA31D1Q6ZQQ2 1576 aa19.19■□□□□ 0.66
GFAP-227ENST00000638400 ARHGAP31Q2M1Z3 1444 aa19.19■□□□□ 0.66
GFAP-227ENST00000638400 ROCK1Q13464 1354 aa19.19■□□□□ 0.66
GFAP-227ENST00000638400 CEP152O94986 1710 aa19.17■□□□□ 0.66
GFAP-227ENST00000638400 PKD2Q13563 968 aa19.17■□□□□ 0.66
GFAP-227ENST00000638400 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
GFAP-227ENST00000638400 VWDEQ8N2E2 1590 aa19.16■□□□□ 0.66
GFAP-227ENST00000638400 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
GFAP-227ENST00000638400 RRBP1Q9P2E9 1410 aaKnown RBP19.14■□□□□ 0.65
GFAP-227ENST00000638400 UGGT1Q9NYU2 1555 aa19.14■□□□□ 0.65
GFAP-227ENST00000638400 ITGAEP38570 1179 aa19.13■□□□□ 0.65
GFAP-227ENST00000638400 FBXO41Q8TF61 875 aa19.13■□□□□ 0.65
GFAP-227ENST00000638400 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
GFAP-227ENST00000638400 CERKQ8TCT0 537 aa19.12■□□□□ 0.65
GFAP-227ENST00000638400 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
GFAP-227ENST00000638400 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
GFAP-227ENST00000638400 UNC13BO14795 1591 aa19.06■□□□□ 0.64
GFAP-227ENST00000638400 NEURL4Q96JN8 1562 aa19.05■□□□□ 0.64
GFAP-227ENST00000638400 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
GFAP-227ENST00000638400 LTBP4Q8N2S1 1624 aa19.04■□□□□ 0.64
GFAP-227ENST00000638400 NOS1P29475 1434 aa19.04■□□□□ 0.64
GFAP-227ENST00000638400 ZNF335Q9H4Z2 1342 aaPredicted RBP19.02■□□□□ 0.64
GFAP-227ENST00000638400 POLR1AO95602 1720 aaPredicted RBP19.02■□□□□ 0.63
GFAP-227ENST00000638400 MED14O60244 1454 aa19.02■□□□□ 0.63
GFAP-227ENST00000638400 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
GFAP-227ENST00000638400 TET3O43151 1660 aa19.01■□□□□ 0.63
GFAP-227ENST00000638400 SYNMO15061 1565 aa19■□□□□ 0.63
GFAP-227ENST00000638400 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
GFAP-227ENST00000638400 NUP155O75694 1391 aa18.99■□□□□ 0.63
GFAP-227ENST00000638400 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 ARHGAP23Q9P227 1491 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 IDI1Q13907 227 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 STAG3Q9UJ98 1225 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 PIK3C2BO00750 1634 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 IQGAP3Q86VI3 1631 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 SLIT1O75093 1534 aa18.98■□□□□ 0.63
GFAP-227ENST00000638400 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
GFAP-227ENST00000638400 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
GFAP-227ENST00000638400 NAIPQ13075 1403 aa18.96■□□□□ 0.63
GFAP-227ENST00000638400 GCC2Q8IWJ2 1684 aa18.95■□□□□ 0.62
GFAP-227ENST00000638400 ADGRB3O60242 1522 aa18.95■□□□□ 0.62
GFAP-227ENST00000638400 TMEM2Q9UHN6 1383 aa18.95■□□□□ 0.62
GFAP-227ENST00000638400 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
GFAP-227ENST00000638400 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
GFAP-227ENST00000638400 KDM5AP29375 1690 aaKnown RBP18.94■□□□□ 0.62
GFAP-227ENST00000638400 HFM1A2PYH4 1435 aa18.93■□□□□ 0.62
GFAP-227ENST00000638400 IQGAP1P46940 1657 aa18.93■□□□□ 0.62
GFAP-227ENST00000638400 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
GFAP-227ENST00000638400 LTKP29376 864 aa18.92■□□□□ 0.62
GFAP-227ENST00000638400 CPS1P31327 1500 aa18.91■□□□□ 0.62
GFAP-227ENST00000638400 E9PCH4 1651 aa18.9■□□□□ 0.62
GFAP-227ENST00000638400 ZFYVE9O95405 1425 aa18.83■□□□□ 0.6
GFAP-227ENST00000638400 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
GFAP-227ENST00000638400 CHGAP10645 457 aaKnown RBP18.82■□□□□ 0.6
GFAP-227ENST00000638400 RIMS2Q9UQ26 1411 aa18.82■□□□□ 0.6
GFAP-227ENST00000638400 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
GFAP-227ENST00000638400 HRCP23327 699 aa18.81■□□□□ 0.6
GFAP-227ENST00000638400 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
GFAP-227ENST00000638400 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
GFAP-227ENST00000638400 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms