RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 PTGDRQ13258 359 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 CALR3Q96L12 384 aaKnown RBP4.12□□□□□ -1.75
HMHB1-202ENST00000638299 BEGAINQ9BUH8 593 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 TRPC6Q9Y210 931 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.11□□□□□ -1.75
HMHB1-202ENST00000638299 RFC5P40937 340 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 MAP3K9P80192 1104 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 MYSM1Q5VVJ2 828 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 DPY19L2Q6NUT2 758 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 PLPP6Q8IY26 295 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 GLMNQ92990 594 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 IVNS1ABPQ9Y6Y0 642 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 TBC1D12O60347 775 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 BRD1O95696 1058 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 ABL2P42684 1182 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 FOXK1P85037 733 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 KCNA1Q09470 495 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 FAM161AQ3B820 660 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 MTMR14Q8NCE2 650 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 UPF1Q92900 1129 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMHB1-202ENST00000638299 CDHR5Q9HBB8 845 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 GPCPD1Q9NPB8 672 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 CDK11BP21127 795 aaKnown RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 CLCN1P35523 988 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 SRPK2P78362 688 aaKnown RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 CCDC27Q2M243 656 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 BANK1Q8NDB2 785 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 PUS7Q96PZ0 661 aaKnown RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 TMEM106CQ9BVX2 250 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 CDK11AQ9UQ88 783 aaPredicted RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 HSP90B1P14625 803 aaKnown RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 CLK2P49760 499 aaKnown RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 GOLGA2Q08379 1002 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 CFAP70Q5T0N1 1121 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 ADAMTS19Q8TE59 1207 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 PBXIP1Q96AQ6 731 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 NPDC1Q9NQX5 325 aaPredicted RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 FAM217BQ9NTX9 383 aaPredicted RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 LIMD1Q9UGP4 676 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 TBC1D2BQ9UPU7 963 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 AMOTL2Q9Y2J4 779 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 C2orf72A6NCS6 295 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 PTGER2P43116 358 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 HDGFL1Q5TGJ6 251 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 PELP1Q8IZL8 1130 aaKnown RBP4.07□□□□□ -1.76
HMHB1-202ENST00000638299 TMC2Q8TDI7 906 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 RBM42Q9BTD8 480 aaKnown RBP4.07□□□□□ -1.76
HMHB1-202ENST00000638299 TBC1D2Q9BYX2 928 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 PATL2C9JE40 543 aaKnown RBP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 PDE4CQ08493 712 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 CDCA8Q53HL2 280 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 SND1Q7KZF4 910 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 ILDR1Q86SU0 546 aaPredicted RBP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 MICALL2Q8IY33 904 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 FAM177A1Q8N128 213 aaPredicted RBP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 PHF12Q96QT6 1004 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 IGSF5Q9NSI5 407 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 KIF3CO14782 793 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 HMGB1P09429 215 aaKnown RBP4.05□□□□□ -1.76
HMHB1-202ENST00000638299 CSB-PGBD3P0DP91 1061 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 PRKAR2AP13861 404 aaKnown RBP4.05□□□□□ -1.76
HMHB1-202ENST00000638299 MYT1LQ9UL68 1186 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 USTQ9Y2C2 406 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 EIF5BO60841 1220 aaKnown RBP4.04□□□□□ -1.76
HMHB1-202ENST00000638299 TMEM259Q4ZIN3 620 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 PPP2R2DQ66LE6 453 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 CHMP4AQ9BY43 222 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 VRTNQ9H8Y1 702 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 KIAA1522Q9P206 1035 aaPredicted RBP4.04□□□□□ -1.76
HMHB1-202ENST00000638299 TMEM88BA6NKF7 163 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 EVI5O60447 810 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 PAK3O75914 559 aaPredicted RBP4.03□□□□□ -1.76
HMHB1-202ENST00000638299 CSPP1Q1MSJ5 1256 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 RSPH4AQ5TD94 716 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 RIC3Q7Z5B4 369 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 AP1G2O75843 785 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 LMOD1P29536 600 aaPredicted RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 QPCTQ16769 361 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 TSR1Q2NL82 804 aaKnown RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 RTL5Q5HYW3 569 aaPredicted RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 METTL3Q86U44 580 aaKnown RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 WWC1Q8IX03 1113 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 RBM33Q96EV2 1170 aaKnown RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 PPP1R12CQ9BZL4 782 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 ZRANB1Q9UGI0 708 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 RBM47A0AV96 593 aaKnown RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 PALM3A6NDB9 673 aaPredicted RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 VAC14Q08AM6 782 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 NOM1Q5C9Z4 860 aaKnown RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 ZNF710Q8N1W2 664 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 SPIRE2Q8WWL2 714 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 MRRFQ96E11 262 aaKnown RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 MS4A3Q96HJ5 214 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 GJD4Q96KN9 370 aaPredicted RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 GPR37L1O60883 481 aa4□□□□□ -1.77
HMHB1-202ENST00000638299 NDUFV2P19404 249 aa4□□□□□ -1.77
HMHB1-202ENST00000638299 EN1Q05925 392 aaPredicted RBP4□□□□□ -1.77
HMHB1-202ENST00000638299 TMEM92Q6UXU6 159 aa4□□□□□ -1.77
HMHB1-202ENST00000638299 TXNDC2Q86VQ3 553 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms