RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
CLN6-225ENST00000638144 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
CLN6-225ENST00000638144 ANKRD30AQ9BXX3 1397 aa19.22■□□□□ 0.67
CLN6-225ENST00000638144 ADGRL2O95490 1459 aa19.21■□□□□ 0.67
CLN6-225ENST00000638144 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
CLN6-225ENST00000638144 KDM5DQ9BY66 1539 aa19.2■□□□□ 0.66
CLN6-225ENST00000638144 NCOA1Q15788 1441 aa19.2■□□□□ 0.66
CLN6-225ENST00000638144 CEP152O94986 1710 aa19.2■□□□□ 0.66
CLN6-225ENST00000638144 ZMYM3Q14202 1370 aa19.19■□□□□ 0.66
CLN6-225ENST00000638144 ERBINQ96RT1 1412 aa19.18■□□□□ 0.66
CLN6-225ENST00000638144 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
CLN6-225ENST00000638144 HSPA2P54652 639 aa19.17■□□□□ 0.66
CLN6-225ENST00000638144 ABCC3O15438 1527 aa19.16■□□□□ 0.66
CLN6-225ENST00000638144 WASHC2CQ9Y4E1 1318 aa19.15■□□□□ 0.66
CLN6-225ENST00000638144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
CLN6-225ENST00000638144 PRDM15P57071 1507 aaPredicted RBP19.14■□□□□ 0.65
CLN6-225ENST00000638144 DEPDC5O75140 1603 aa19.14■□□□□ 0.65
CLN6-225ENST00000638144 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
CLN6-225ENST00000638144 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
CLN6-225ENST00000638144 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
CLN6-225ENST00000638144 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
CLN6-225ENST00000638144 CAMSAP1Q5T5Y3 1602 aa19.12■□□□□ 0.65
CLN6-225ENST00000638144 MYO3AQ8NEV4 1616 aa19.12■□□□□ 0.65
CLN6-225ENST00000638144 UHRF1BP1Q6BDS2 1440 aa19.12■□□□□ 0.65
CLN6-225ENST00000638144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLN6-225ENST00000638144 ANKRD50Q9ULJ7 1429 aa19.11■□□□□ 0.65
CLN6-225ENST00000638144 CFAP65Q6ZU64 1925 aaKnown RBP19.11■□□□□ 0.65
CLN6-225ENST00000638144 NPATQ14207 1427 aa19.1■□□□□ 0.65
CLN6-225ENST00000638144 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
CLN6-225ENST00000638144 PZPP20742 1482 aa19.09■□□□□ 0.65
CLN6-225ENST00000638144 ROCK1Q13464 1354 aa19.08■□□□□ 0.65
CLN6-225ENST00000638144 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
CLN6-225ENST00000638144 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
CLN6-225ENST00000638144 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
CLN6-225ENST00000638144 KANK1Q14678 1352 aa19.04■□□□□ 0.64
CLN6-225ENST00000638144 TNRQ92752 1358 aa19.04■□□□□ 0.64
CLN6-225ENST00000638144 UNC13BO14795 1591 aa19.03■□□□□ 0.64
CLN6-225ENST00000638144 ERVK-7P63135 1459 aa19.02■□□□□ 0.63
CLN6-225ENST00000638144 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
CLN6-225ENST00000638144 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
CLN6-225ENST00000638144 SPATA31D1Q6ZQQ2 1576 aa19■□□□□ 0.63
CLN6-225ENST00000638144 EFCAB6Q5THR3 1501 aa18.99■□□□□ 0.63
CLN6-225ENST00000638144 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
CLN6-225ENST00000638144 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
CLN6-225ENST00000638144 NAIPQ13075 1403 aa18.97■□□□□ 0.63
CLN6-225ENST00000638144 TET3O43151 1660 aa18.96■□□□□ 0.63
CLN6-225ENST00000638144 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
CLN6-225ENST00000638144 IQGAP3Q86VI3 1631 aa18.95■□□□□ 0.62
CLN6-225ENST00000638144 E9PCH4 1651 aa18.92■□□□□ 0.62
CLN6-225ENST00000638144 NLRP1Q9C000 1473 aa18.92■□□□□ 0.62
CLN6-225ENST00000638144 SYNMO15061 1565 aa18.92■□□□□ 0.62
CLN6-225ENST00000638144 NUP155O75694 1391 aa18.92■□□□□ 0.62
CLN6-225ENST00000638144 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
CLN6-225ENST00000638144 UGGT1Q9NYU2 1555 aa18.91■□□□□ 0.62
CLN6-225ENST00000638144 PIK3C2BO00750 1634 aa18.89■□□□□ 0.62
CLN6-225ENST00000638144 NCKAP5LQ9HCH0 1330 aa18.89■□□□□ 0.61
CLN6-225ENST00000638144 UBR1Q8IWV7 1749 aa18.88■□□□□ 0.61
CLN6-225ENST00000638144 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
CLN6-225ENST00000638144 POLR1AO95602 1720 aaPredicted RBP18.86■□□□□ 0.61
CLN6-225ENST00000638144 NOS1P29475 1434 aa18.86■□□□□ 0.61
CLN6-225ENST00000638144 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
CLN6-225ENST00000638144 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
CLN6-225ENST00000638144 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
CLN6-225ENST00000638144 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
CLN6-225ENST00000638144 IDI1Q13907 227 aa18.81■□□□□ 0.6
CLN6-225ENST00000638144 THEMISQ8N1K5 641 aaPredicted RBP18.8■□□□□ 0.6
CLN6-225ENST00000638144 PTPRTO14522 1441 aa18.8■□□□□ 0.6
CLN6-225ENST00000638144 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
CLN6-225ENST00000638144 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
CLN6-225ENST00000638144 PKD2Q13563 968 aa18.78■□□□□ 0.6
CLN6-225ENST00000638144 STAG3Q9UJ98 1225 aa18.78■□□□□ 0.6
CLN6-225ENST00000638144 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
CLN6-225ENST00000638144 SETD5Q9C0A6 1442 aa18.75■□□□□ 0.59
CLN6-225ENST00000638144 ANKLE2Q86XL3 938 aa18.75■□□□□ 0.59
CLN6-225ENST00000638144 KDM5AP29375 1690 aaKnown RBP18.75■□□□□ 0.59
CLN6-225ENST00000638144 IQGAP1P46940 1657 aa18.75■□□□□ 0.59
CLN6-225ENST00000638144 ARHGAP23Q9P227 1491 aa18.74■□□□□ 0.59
CLN6-225ENST00000638144 TMEM131LA2VDJ0 1609 aa18.74■□□□□ 0.59
CLN6-225ENST00000638144 SLIT1O75093 1534 aa18.74■□□□□ 0.59
CLN6-225ENST00000638144 SCAF11Q99590 1463 aaKnown RBP18.73■□□□□ 0.59
CLN6-225ENST00000638144 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
CLN6-225ENST00000638144 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
CLN6-225ENST00000638144 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
CLN6-225ENST00000638144 LTKP29376 864 aa18.72■□□□□ 0.59
CLN6-225ENST00000638144 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
CLN6-225ENST00000638144 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
CLN6-225ENST00000638144 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
CLN6-225ENST00000638144 ZNF335Q9H4Z2 1342 aaPredicted RBP18.72■□□□□ 0.59
CLN6-225ENST00000638144 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
CLN6-225ENST00000638144 RAB3GAP2Q9H2M9 1393 aa18.71■□□□□ 0.59
CLN6-225ENST00000638144 FOXD1Q16676 465 aa18.71■□□□□ 0.59
CLN6-225ENST00000638144 TXNDC2Q86VQ3 553 aa18.7■□□□□ 0.58
CLN6-225ENST00000638144 LTBP4Q8N2S1 1624 aa18.7■□□□□ 0.58
CLN6-225ENST00000638144 MED14O60244 1454 aa18.7■□□□□ 0.58
CLN6-225ENST00000638144 TRPM2O94759 1503 aa18.69■□□□□ 0.58
CLN6-225ENST00000638144 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
CLN6-225ENST00000638144 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
CLN6-225ENST00000638144 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
CLN6-225ENST00000638144 EID1Q9Y6B2 187 aa18.65■□□□□ 0.58
CLN6-225ENST00000638144 ZFYVE9O95405 1425 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms