RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
CAPN3-221ENST00000638141 RIMBP3CA6NJZ7 1639 aa15.64■□□□□ 0.09
CAPN3-221ENST00000638141 RIMBP3BA6NNM3 1639 aa15.64■□□□□ 0.09
CAPN3-221ENST00000638141 RIMBP3Q9UFD9 1639 aa15.64■□□□□ 0.09
CAPN3-221ENST00000638141 FAM161AQ3B820 660 aa15.64■□□□□ 0.09
CAPN3-221ENST00000638141 SAMD9Q5K651 1589 aa15.63■□□□□ 0.09
CAPN3-221ENST00000638141 ANKRD30BQ9BXX2 1392 aa15.63■□□□□ 0.09
CAPN3-221ENST00000638141 PDCL3Q9H2J4 239 aa15.63■□□□□ 0.09
CAPN3-221ENST00000638141 TPM2P07951 284 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 KDM2BQ8NHM5 1336 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 KIF14Q15058 1648 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 SLC4A3P48751 1232 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 MBD5Q9P267 1494 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 DISP1Q96F81 1524 aa15.62■□□□□ 0.09
CAPN3-221ENST00000638141 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
CAPN3-221ENST00000638141 FSD2A1L4K1 749 aa15.61■□□□□ 0.09
CAPN3-221ENST00000638141 MPHOSPH9Q99550 1183 aa15.61■□□□□ 0.09
CAPN3-221ENST00000638141 KIF15Q9NS87 1388 aa15.61■□□□□ 0.09
CAPN3-221ENST00000638141 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
CAPN3-221ENST00000638141 POGKQ9P215 609 aa15.6■□□□□ 0.09
CAPN3-221ENST00000638141 PLEKHH2Q8IVE3 1493 aa15.59■□□□□ 0.09
CAPN3-221ENST00000638141 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
CAPN3-221ENST00000638141 KDM5CP41229 1560 aa15.58■□□□□ 0.09
CAPN3-221ENST00000638141 CARMIL2Q6F5E8 1435 aa15.58■□□□□ 0.08
CAPN3-221ENST00000638141 ROCK1Q13464 1354 aa15.58■□□□□ 0.08
CAPN3-221ENST00000638141 NBPF8Q3BBV2 869 aa15.58■□□□□ 0.08
CAPN3-221ENST00000638141 TMC1Q8TDI8 760 aa15.58■□□□□ 0.08
CAPN3-221ENST00000638141 KDM6BO15054 1643 aa15.58■□□□□ 0.08
CAPN3-221ENST00000638141 KIAA0556O60303 1618 aa15.58■□□□□ 0.08
CAPN3-221ENST00000638141 RALBP1Q15311 655 aa15.57■□□□□ 0.08
CAPN3-221ENST00000638141 CENPQQ7L2Z9 268 aaPredicted RBP15.57■□□□□ 0.08
CAPN3-221ENST00000638141 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
CAPN3-221ENST00000638141 E9PCH4 1651 aa15.57■□□□□ 0.08
CAPN3-221ENST00000638141 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
CAPN3-221ENST00000638141 AAMPQ13685 434 aa15.56■□□□□ 0.08
CAPN3-221ENST00000638141 PRDM4Q9UKN5 801 aa15.56■□□□□ 0.08
CAPN3-221ENST00000638141 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
CAPN3-221ENST00000638141 XRCC6P12956 609 aaKnown RBP eCLIP15.55■□□□□ 0.08
CAPN3-221ENST00000638141 RBM10P98175 930 aaKnown RBP15.55■□□□□ 0.08
CAPN3-221ENST00000638141 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
CAPN3-221ENST00000638141 GOLGA6L3A6NEY3 463 aa15.54■□□□□ 0.08
CAPN3-221ENST00000638141 ISY1Q9ULR0 285 aaKnown RBP15.54■□□□□ 0.08
CAPN3-221ENST00000638141 USP47Q96K76 1375 aa15.53■□□□□ 0.08
CAPN3-221ENST00000638141 PTPRGP23470 1445 aa15.51■□□□□ 0.07
CAPN3-221ENST00000638141 FGD1P98174 961 aa15.5■□□□□ 0.07
CAPN3-221ENST00000638141 UHRF1BP1Q6BDS2 1440 aa15.5■□□□□ 0.07
CAPN3-221ENST00000638141 BECN1Q14457 450 aa15.5■□□□□ 0.07
CAPN3-221ENST00000638141 CRBNQ96SW2 442 aa15.5■□□□□ 0.07
CAPN3-221ENST00000638141 RALGAPBQ86X10 1494 aa15.49■□□□□ 0.07
CAPN3-221ENST00000638141 MRE11P49959 708 aa15.49■□□□□ 0.07
CAPN3-221ENST00000638141 TERF1P54274 439 aa15.48■□□□□ 0.07
CAPN3-221ENST00000638141 MAP7D2Q96T17 732 aa15.48■□□□□ 0.07
CAPN3-221ENST00000638141 RRP7BPQ9NSQ0 103 aa15.48■□□□□ 0.07
CAPN3-221ENST00000638141 ESPNB1AK53 854 aa15.48■□□□□ 0.07
CAPN3-221ENST00000638141 ANTXR1Q9H6X2 564 aa15.47■□□□□ 0.07
CAPN3-221ENST00000638141 BLMP54132 1417 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-221ENST00000638141 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.07
CAPN3-221ENST00000638141 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.06
CAPN3-221ENST00000638141 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
CAPN3-221ENST00000638141 USP19O94966 1318 aa15.45■□□□□ 0.06
CAPN3-221ENST00000638141 NLRP13Q86W25 1043 aa15.44■□□□□ 0.06
CAPN3-221ENST00000638141 MAGI3Q5TCQ9 1506 aa15.44■□□□□ 0.06
CAPN3-221ENST00000638141 PLB1Q6P1J6 1458 aa15.44■□□□□ 0.06
CAPN3-221ENST00000638141 PARD3Q8TEW0 1356 aa15.44■□□□□ 0.06
CAPN3-221ENST00000638141 NLRP1Q9C000 1473 aa15.43■□□□□ 0.06
CAPN3-221ENST00000638141 SKAP1Q86WV1 359 aa15.42■□□□□ 0.06
CAPN3-221ENST00000638141 DAPK1P53355 1430 aa15.41■□□□□ 0.06
CAPN3-221ENST00000638141 PANK2Q9BZ23 570 aa15.41■□□□□ 0.06
CAPN3-221ENST00000638141 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
CAPN3-221ENST00000638141 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
CAPN3-221ENST00000638141 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
CAPN3-221ENST00000638141 ADCY10Q96PN6 1610 aa15.4■□□□□ 0.06
CAPN3-221ENST00000638141 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
CAPN3-221ENST00000638141 PZPP20742 1482 aa15.39■□□□□ 0.05
CAPN3-221ENST00000638141 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
CAPN3-221ENST00000638141 KIAA1107Q9UPP5 1409 aa15.39■□□□□ 0.05
CAPN3-221ENST00000638141 ABCA8O94911 1581 aa15.38■□□□□ 0.05
CAPN3-221ENST00000638141 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
CAPN3-221ENST00000638141 MCM4P33991 863 aa15.38■□□□□ 0.05
CAPN3-221ENST00000638141 A0A0U1RQG5 324 aaPredicted RBP15.37■□□□□ 0.05
CAPN3-221ENST00000638141 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
CAPN3-221ENST00000638141 PLIN1O60240 522 aa15.36■□□□□ 0.05
CAPN3-221ENST00000638141 MTERF4Q7Z6M4 381 aaKnown RBP15.36■□□□□ 0.05
CAPN3-221ENST00000638141 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.36■□□□□ 0.05
CAPN3-221ENST00000638141 GRPEL1Q9HAV7 217 aa15.36■□□□□ 0.05
CAPN3-221ENST00000638141 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
CAPN3-221ENST00000638141 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
CAPN3-221ENST00000638141 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
CAPN3-221ENST00000638141 SCAPERQ9BY12 1400 aa15.35■□□□□ 0.05
CAPN3-221ENST00000638141 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
CAPN3-221ENST00000638141 UHRF1BP1LA0JNW5 1464 aa15.34■□□□□ 0.05
CAPN3-221ENST00000638141 PDE4CQ08493 712 aa15.34■□□□□ 0.05
CAPN3-221ENST00000638141 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
CAPN3-221ENST00000638141 RGS3P49796 1198 aa15.33■□□□□ 0.04
CAPN3-221ENST00000638141 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.04
CAPN3-221ENST00000638141 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
CAPN3-221ENST00000638141 TRIM44Q96DX7 344 aaPredicted RBP15.33■□□□□ 0.04
CAPN3-221ENST00000638141 EPRSP07814 1512 aaKnown RBP15.33■□□□□ 0.04
CAPN3-221ENST00000638141 ABCC5O15440 1437 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms