RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 NBPF1Q3BBV0 1214 aa26.74■■□□□ 1.87
CACNA1A-243ENST00000637616 PLB1Q6P1J6 1458 aa26.73■■□□□ 1.87
CACNA1A-243ENST00000637616 KIAA0556O60303 1618 aa26.73■■□□□ 1.87
CACNA1A-243ENST00000637616 KTN1Q86UP2 1357 aaKnown RBP26.73■■□□□ 1.87
CACNA1A-243ENST00000637616 KIAA0586Q9BVV6 1533 aa26.72■■□□□ 1.87
CACNA1A-243ENST00000637616 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
CACNA1A-243ENST00000637616 C20orf194Q5TEA3 1177 aa26.72■■□□□ 1.87
CACNA1A-243ENST00000637616 RAPGEF6Q8TEU7 1601 aa26.72■■□□□ 1.87
CACNA1A-243ENST00000637616 MS4A1P11836 297 aa26.7■■□□□ 1.87
CACNA1A-243ENST00000637616 PDE3BQ13370 1112 aa26.69■■□□□ 1.86
CACNA1A-243ENST00000637616 PER1O15534 1290 aaPredicted RBP26.68■■□□□ 1.86
CACNA1A-243ENST00000637616 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.86
CACNA1A-243ENST00000637616 FBLN2P98095 1184 aa26.67■■□□□ 1.86
CACNA1A-243ENST00000637616 PARD3Q8TEW0 1356 aa26.66■■□□□ 1.86
CACNA1A-243ENST00000637616 ADGRL2O95490 1459 aa26.66■■□□□ 1.86
CACNA1A-243ENST00000637616 TSPY4P0CV99 314 aa26.65■■□□□ 1.86
CACNA1A-243ENST00000637616 TSPY10P0CW01 314 aa26.65■■□□□ 1.86
CACNA1A-243ENST00000637616 ADGBQ8N7X0 1667 aa26.64■■□□□ 1.85
CACNA1A-243ENST00000637616 PPM1GO15355 546 aaPredicted RBP26.62■■□□□ 1.85
CACNA1A-243ENST00000637616 PANK3Q9H999 370 aa26.62■■□□□ 1.85
CACNA1A-243ENST00000637616 USP35Q9P2H5 1018 aa26.62■■□□□ 1.85
CACNA1A-243ENST00000637616 C9orf84Q5VXU9 1444 aa26.61■■□□□ 1.85
CACNA1A-243ENST00000637616 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.6■■□□□ 1.85
CACNA1A-243ENST00000637616 BRPF3Q9ULD4 1205 aa26.59■■□□□ 1.85
CACNA1A-243ENST00000637616 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.85
CACNA1A-243ENST00000637616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.58■■□□□ 1.85
CACNA1A-243ENST00000637616 ARHGEF12Q9NZN5 1544 aa26.57■■□□□ 1.84
CACNA1A-243ENST00000637616 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
CACNA1A-243ENST00000637616 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
CACNA1A-243ENST00000637616 ITSN2Q9NZM3 1697 aa26.55■■□□□ 1.84
CACNA1A-243ENST00000637616 NFKBIBQ15653 356 aa26.54■■□□□ 1.84
CACNA1A-243ENST00000637616 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
CACNA1A-243ENST00000637616 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
CACNA1A-243ENST00000637616 CHMP7Q8WUX9 453 aaPredicted RBP26.53■■□□□ 1.84
CACNA1A-243ENST00000637616 DDRGK1Q96HY6 314 aa26.53■■□□□ 1.84
CACNA1A-243ENST00000637616 E9PCH4 1651 aa26.53■■□□□ 1.84
CACNA1A-243ENST00000637616 WASHC2CQ9Y4E1 1318 aa26.52■■□□□ 1.84
CACNA1A-243ENST00000637616 TESK2Q96S53 571 aa26.51■■□□□ 1.83
CACNA1A-243ENST00000637616 DAXXQ9UER7 740 aaPredicted RBP26.5■■□□□ 1.83
CACNA1A-243ENST00000637616 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
CACNA1A-243ENST00000637616 RGS3P49796 1198 aa26.5■■□□□ 1.83
CACNA1A-243ENST00000637616 GSE1Q14687 1217 aa26.5■■□□□ 1.83
CACNA1A-243ENST00000637616 PRAG1Q86YV5 1406 aa26.49■■□□□ 1.83
CACNA1A-243ENST00000637616 CEP170Q5SW79 1584 aa26.47■■□□□ 1.83
CACNA1A-243ENST00000637616 CCDC144AA2RUR9 1427 aa26.46■■□□□ 1.83
CACNA1A-243ENST00000637616 FRAT1Q92837 279 aaPredicted RBP26.46■■□□□ 1.83
CACNA1A-243ENST00000637616 KDM2BQ8NHM5 1336 aa26.46■■□□□ 1.83
CACNA1A-243ENST00000637616 JPH4Q96JJ6 628 aa26.45■■□□□ 1.83
CACNA1A-243ENST00000637616 BLMP54132 1417 aaPredicted RBP26.45■■□□□ 1.82
CACNA1A-243ENST00000637616 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
CACNA1A-243ENST00000637616 KDM5DQ9BY66 1539 aa26.44■■□□□ 1.82
CACNA1A-243ENST00000637616 PLEKHH1Q9ULM0 1364 aa26.42■■□□□ 1.82
CACNA1A-243ENST00000637616 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
CACNA1A-243ENST00000637616 C8orf34Q49A92 452 aa26.41■■□□□ 1.82
CACNA1A-243ENST00000637616 DUSP27Q5VZP5 1158 aa26.41■■□□□ 1.82
CACNA1A-243ENST00000637616 TMF1P82094 1093 aa26.4■■□□□ 1.82
CACNA1A-243ENST00000637616 CENPQQ7L2Z9 268 aaPredicted RBP26.4■■□□□ 1.82
CACNA1A-243ENST00000637616 PTPRGP23470 1445 aa26.39■■□□□ 1.82
CACNA1A-243ENST00000637616 WDR43Q15061 677 aaKnown RBP eCLIP26.39■■□□□ 1.81
CACNA1A-243ENST00000637616 FAM161AQ3B820 660 aa26.39■■□□□ 1.81
CACNA1A-243ENST00000637616 CCDC146Q8IYE0 955 aa26.38■■□□□ 1.81
CACNA1A-243ENST00000637616 ERBINQ96RT1 1412 aa26.38■■□□□ 1.81
CACNA1A-243ENST00000637616 FAM135AQ9P2D6 1515 aa26.38■■□□□ 1.81
CACNA1A-243ENST00000637616 COL17A1Q9UMD9 1497 aaPredicted RBP26.38■■□□□ 1.81
CACNA1A-243ENST00000637616 FRAT2O75474 233 aaPredicted RBP26.38■■□□□ 1.81
CACNA1A-243ENST00000637616 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
CACNA1A-243ENST00000637616 TRPM1Q7Z4N2 1603 aa26.37■■□□□ 1.81
CACNA1A-243ENST00000637616 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
CACNA1A-243ENST00000637616 ADCY10Q96PN6 1610 aa26.37■■□□□ 1.81
CACNA1A-243ENST00000637616 ABCC10Q5T3U5 1492 aa26.36■■□□□ 1.81
CACNA1A-243ENST00000637616 A2MP01023 1474 aa26.35■■□□□ 1.81
CACNA1A-243ENST00000637616 SHANK2Q9UPX8 1470 aa26.35■■□□□ 1.81
CACNA1A-243ENST00000637616 PPP2R1AP30153 589 aa26.35■■□□□ 1.81
CACNA1A-243ENST00000637616 ATP10BO94823 1461 aa26.35■■□□□ 1.81
CACNA1A-243ENST00000637616 ZMYM4Q5VZL5 1548 aa26.35■■□□□ 1.81
CACNA1A-243ENST00000637616 PLA2R1Q13018 1463 aa26.34■■□□□ 1.81
CACNA1A-243ENST00000637616 GOLGA2Q08379 1002 aa26.33■■□□□ 1.81
CACNA1A-243ENST00000637616 KNSTRNQ9Y448 316 aa26.33■■□□□ 1.81
CACNA1A-243ENST00000637616 CARMIL2Q6F5E8 1435 aa26.32■■□□□ 1.8
CACNA1A-243ENST00000637616 SPINK5Q9NQ38 1064 aaPredicted RBP26.32■■□□□ 1.8
CACNA1A-243ENST00000637616 GPRASP1Q5JY77 1395 aa26.3■■□□□ 1.8
CACNA1A-243ENST00000637616 BCAR3O75815 825 aa26.3■■□□□ 1.8
CACNA1A-243ENST00000637616 EIF4G3O43432 1585 aaKnown RBP26.27■■□□□ 1.8
CACNA1A-243ENST00000637616 MAGI2Q86UL8 1455 aa26.26■■□□□ 1.79
CACNA1A-243ENST00000637616 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.25■■□□□ 1.79
CACNA1A-243ENST00000637616 APAF1O14727 1248 aa26.24■■□□□ 1.79
CACNA1A-243ENST00000637616 SLFN5Q08AF3 891 aa26.24■■□□□ 1.79
CACNA1A-243ENST00000637616 ZNF521Q96K83 1311 aa26.24■■□□□ 1.79
CACNA1A-243ENST00000637616 PLEKHH2Q8IVE3 1493 aa26.23■■□□□ 1.79
CACNA1A-243ENST00000637616 AMER1Q5JTC6 1135 aaPredicted RBP26.23■■□□□ 1.79
CACNA1A-243ENST00000637616 IGHDP01880 384 aa26.23■■□□□ 1.79
CACNA1A-243ENST00000637616 PRDM15P57071 1507 aaPredicted RBP26.22■■□□□ 1.79
CACNA1A-243ENST00000637616 INSRP06213 1382 aa26.21■■□□□ 1.79
CACNA1A-243ENST00000637616 CCDC141Q6ZP82 1450 aa26.21■■□□□ 1.79
CACNA1A-243ENST00000637616 DMRT2Q9Y5R5 561 aa26.2■■□□□ 1.79
CACNA1A-243ENST00000637616 EIF5BO60841 1220 aaKnown RBP26.2■■□□□ 1.78
CACNA1A-243ENST00000637616 SEC24BO95487 1268 aa26.19■■□□□ 1.78
CACNA1A-243ENST00000637616 ABCA8O94911 1581 aa26.19■■□□□ 1.78
CACNA1A-243ENST00000637616 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
CACNA1A-243ENST00000637616 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms