RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 CAMSAP1Q5T5Y3 1602 aa17.43■□□□□ 0.38
LINC01548-202ENST00000637328 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
LINC01548-202ENST00000637328 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
LINC01548-202ENST00000637328 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
LINC01548-202ENST00000637328 SHANK2Q9UPX8 1470 aa17.42■□□□□ 0.38
LINC01548-202ENST00000637328 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
LINC01548-202ENST00000637328 NAIPQ13075 1403 aa17.41■□□□□ 0.38
LINC01548-202ENST00000637328 TOM1O60784 492 aa17.41■□□□□ 0.38
LINC01548-202ENST00000637328 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
LINC01548-202ENST00000637328 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
LINC01548-202ENST00000637328 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
LINC01548-202ENST00000637328 ADGRL2O95490 1459 aa17.39■□□□□ 0.37
LINC01548-202ENST00000637328 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
LINC01548-202ENST00000637328 HRCP23327 699 aa17.37■□□□□ 0.37
LINC01548-202ENST00000637328 RGS17Q9UGC6 210 aaPredicted RBP17.37■□□□□ 0.37
LINC01548-202ENST00000637328 PKD2Q13563 968 aa17.35■□□□□ 0.37
LINC01548-202ENST00000637328 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
LINC01548-202ENST00000637328 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
LINC01548-202ENST00000637328 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
LINC01548-202ENST00000637328 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
LINC01548-202ENST00000637328 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
LINC01548-202ENST00000637328 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
LINC01548-202ENST00000637328 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
LINC01548-202ENST00000637328 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
LINC01548-202ENST00000637328 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
LINC01548-202ENST00000637328 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
LINC01548-202ENST00000637328 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
LINC01548-202ENST00000637328 NPATQ14207 1427 aa17.3■□□□□ 0.36
LINC01548-202ENST00000637328 ANKRD50Q9ULJ7 1429 aa17.29■□□□□ 0.36
LINC01548-202ENST00000637328 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
LINC01548-202ENST00000637328 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
LINC01548-202ENST00000637328 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
LINC01548-202ENST00000637328 AGLP35573 1532 aa17.27■□□□□ 0.36
LINC01548-202ENST00000637328 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
LINC01548-202ENST00000637328 PLXNC1O60486 1568 aa17.27■□□□□ 0.35
LINC01548-202ENST00000637328 DHX57Q6P158 1386 aaKnown RBP17.27■□□□□ 0.35
LINC01548-202ENST00000637328 KDM5CP41229 1560 aa17.26■□□□□ 0.35
LINC01548-202ENST00000637328 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
LINC01548-202ENST00000637328 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
LINC01548-202ENST00000637328 CPS1P31327 1500 aa17.25■□□□□ 0.35
LINC01548-202ENST00000637328 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
LINC01548-202ENST00000637328 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
LINC01548-202ENST00000637328 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
LINC01548-202ENST00000637328 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
LINC01548-202ENST00000637328 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
LINC01548-202ENST00000637328 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
LINC01548-202ENST00000637328 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
LINC01548-202ENST00000637328 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
LINC01548-202ENST00000637328 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
LINC01548-202ENST00000637328 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
LINC01548-202ENST00000637328 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
LINC01548-202ENST00000637328 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
LINC01548-202ENST00000637328 MPHOSPH9Q99550 1183 aa17.17■□□□□ 0.34
LINC01548-202ENST00000637328 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
LINC01548-202ENST00000637328 A2MP01023 1474 aa17.17■□□□□ 0.34
LINC01548-202ENST00000637328 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
LINC01548-202ENST00000637328 NUP155O75694 1391 aa17.16■□□□□ 0.34
LINC01548-202ENST00000637328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC01548-202ENST00000637328 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
LINC01548-202ENST00000637328 KIF3BO15066 747 aa17.15■□□□□ 0.34
LINC01548-202ENST00000637328 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
LINC01548-202ENST00000637328 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
LINC01548-202ENST00000637328 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
LINC01548-202ENST00000637328 PZPP20742 1482 aa17.12■□□□□ 0.33
LINC01548-202ENST00000637328 FOXD1Q16676 465 aa17.09■□□□□ 0.33
LINC01548-202ENST00000637328 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
LINC01548-202ENST00000637328 UNC13BO14795 1591 aa17.09■□□□□ 0.33
LINC01548-202ENST00000637328 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
LINC01548-202ENST00000637328 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
LINC01548-202ENST00000637328 VWDEQ8N2E2 1590 aa17.07■□□□□ 0.32
LINC01548-202ENST00000637328 NEURL4Q96JN8 1562 aa17.07■□□□□ 0.32
LINC01548-202ENST00000637328 KANK1Q14678 1352 aa17.06■□□□□ 0.32
LINC01548-202ENST00000637328 GGT6Q6P531 493 aa17.06■□□□□ 0.32
LINC01548-202ENST00000637328 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
LINC01548-202ENST00000637328 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
LINC01548-202ENST00000637328 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
LINC01548-202ENST00000637328 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
LINC01548-202ENST00000637328 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
LINC01548-202ENST00000637328 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
LINC01548-202ENST00000637328 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
LINC01548-202ENST00000637328 IQGAP3Q86VI3 1631 aa17.02■□□□□ 0.31
LINC01548-202ENST00000637328 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
LINC01548-202ENST00000637328 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
LINC01548-202ENST00000637328 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
LINC01548-202ENST00000637328 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
LINC01548-202ENST00000637328 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
LINC01548-202ENST00000637328 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
LINC01548-202ENST00000637328 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
LINC01548-202ENST00000637328 WASHC2CQ9Y4E1 1318 aa16.97■□□□□ 0.31
LINC01548-202ENST00000637328 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
LINC01548-202ENST00000637328 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
LINC01548-202ENST00000637328 MED14O60244 1454 aa16.93■□□□□ 0.3
LINC01548-202ENST00000637328 ABCC3O15438 1527 aa16.93■□□□□ 0.3
LINC01548-202ENST00000637328 STRCP1A6NGW2 1772 aa16.92■□□□□ 0.3
LINC01548-202ENST00000637328 TET3O43151 1660 aa16.92■□□□□ 0.3
LINC01548-202ENST00000637328 SYNMO15061 1565 aa16.91■□□□□ 0.3
LINC01548-202ENST00000637328 TIMELESSQ9UNS1 1208 aa16.9■□□□□ 0.3
LINC01548-202ENST00000637328 EFCAB6Q5THR3 1501 aa16.9■□□□□ 0.3
LINC01548-202ENST00000637328 CEP152O94986 1710 aa16.9■□□□□ 0.3
LINC01548-202ENST00000637328 TONSLQ96HA7 1378 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms