RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 STRCQ7RTU9 1775 aa23.36■■□□□ 1.33
CACNA1A-230ENST00000636768 MYO3AQ8NEV4 1616 aa23.35■■□□□ 1.33
CACNA1A-230ENST00000636768 ABCC5O15440 1437 aa23.34■■□□□ 1.33
CACNA1A-230ENST00000636768 SHANK2Q9UPX8 1470 aa23.34■■□□□ 1.33
CACNA1A-230ENST00000636768 PTPRTO14522 1441 aa23.33■■□□□ 1.33
CACNA1A-230ENST00000636768 CAMSAP1Q5T5Y3 1602 aa23.33■■□□□ 1.33
CACNA1A-230ENST00000636768 CEP170BQ9Y4F5 1589 aaPredicted RBP23.32■■□□□ 1.32
CACNA1A-230ENST00000636768 PZPP20742 1482 aa23.32■■□□□ 1.32
CACNA1A-230ENST00000636768 TCOF1Q13428 1488 aaKnown RBP23.32■■□□□ 1.32
CACNA1A-230ENST00000636768 FBXO31Q5XUX0 539 aaPredicted RBP23.32■■□□□ 1.32
CACNA1A-230ENST00000636768 CERKQ8TCT0 537 aa23.32■■□□□ 1.32
CACNA1A-230ENST00000636768 DAPK1P53355 1430 aa23.32■■□□□ 1.32
CACNA1A-230ENST00000636768 TNRQ92752 1358 aa23.31■■□□□ 1.32
CACNA1A-230ENST00000636768 KIF15Q9NS87 1388 aa23.31■■□□□ 1.32
CACNA1A-230ENST00000636768 DUOX2Q9NRD8 1548 aa23.31■■□□□ 1.32
CACNA1A-230ENST00000636768 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-230ENST00000636768 EIF2AK4Q9P2K8 1649 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-230ENST00000636768 ZNF142P52746 1687 aaPredicted RBP23.29■■□□□ 1.32
CACNA1A-230ENST00000636768 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
CACNA1A-230ENST00000636768 A2ML1A8K2U0 1454 aa23.28■■□□□ 1.32
CACNA1A-230ENST00000636768 DNMT1P26358 1616 aaKnown RBP23.27■■□□□ 1.32
CACNA1A-230ENST00000636768 CROCC2H7BZ55 1655 aa23.27■■□□□ 1.32
CACNA1A-230ENST00000636768 NCKAP5LQ9HCH0 1330 aa23.27■■□□□ 1.32
CACNA1A-230ENST00000636768 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
CACNA1A-230ENST00000636768 ABCC3O15438 1527 aa23.26■■□□□ 1.31
CACNA1A-230ENST00000636768 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
CACNA1A-230ENST00000636768 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
CACNA1A-230ENST00000636768 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
CACNA1A-230ENST00000636768 PKD2Q13563 968 aa23.24■■□□□ 1.31
CACNA1A-230ENST00000636768 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
CACNA1A-230ENST00000636768 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
CACNA1A-230ENST00000636768 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
CACNA1A-230ENST00000636768 NLRP1Q9C000 1473 aa23.19■■□□□ 1.3
CACNA1A-230ENST00000636768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.3
CACNA1A-230ENST00000636768 PRDM15P57071 1507 aaPredicted RBP23.17■■□□□ 1.3
CACNA1A-230ENST00000636768 KANK1Q14678 1352 aa23.15■■□□□ 1.3
CACNA1A-230ENST00000636768 ERVK-7P63135 1459 aa23.15■■□□□ 1.3
CACNA1A-230ENST00000636768 SPATA31D1Q6ZQQ2 1576 aa23.14■■□□□ 1.3
CACNA1A-230ENST00000636768 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.29
CACNA1A-230ENST00000636768 UGGT1Q9NYU2 1555 aa23.14■■□□□ 1.29
CACNA1A-230ENST00000636768 CEP152O94986 1710 aa23.13■■□□□ 1.29
CACNA1A-230ENST00000636768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.13■■□□□ 1.29
CACNA1A-230ENST00000636768 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
CACNA1A-230ENST00000636768 LTBP4Q8N2S1 1624 aa23.12■■□□□ 1.29
CACNA1A-230ENST00000636768 ZNF335Q9H4Z2 1342 aaPredicted RBP23.11■■□□□ 1.29
CACNA1A-230ENST00000636768 ANKLE2Q86XL3 938 aa23.1■■□□□ 1.29
CACNA1A-230ENST00000636768 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
CACNA1A-230ENST00000636768 DEPDC5O75140 1603 aa23.08■■□□□ 1.29
CACNA1A-230ENST00000636768 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
CACNA1A-230ENST00000636768 ANKRD50Q9ULJ7 1429 aa23.05■■□□□ 1.28
CACNA1A-230ENST00000636768 NEURL4Q96JN8 1562 aa23.05■■□□□ 1.28
CACNA1A-230ENST00000636768 IQSEC2Q5JU85 1478 aa23.04■■□□□ 1.28
CACNA1A-230ENST00000636768 POLR1AO95602 1720 aaPredicted RBP23.03■■□□□ 1.28
CACNA1A-230ENST00000636768 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
CACNA1A-230ENST00000636768 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-230ENST00000636768 VWDEQ8N2E2 1590 aa23.01■■□□□ 1.27
CACNA1A-230ENST00000636768 ITGAEP38570 1179 aa22.99■■□□□ 1.27
CACNA1A-230ENST00000636768 MED14O60244 1454 aa22.98■■□□□ 1.27
CACNA1A-230ENST00000636768 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
CACNA1A-230ENST00000636768 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
CACNA1A-230ENST00000636768 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
CACNA1A-230ENST00000636768 UBR1Q8IWV7 1749 aa22.94■■□□□ 1.26
CACNA1A-230ENST00000636768 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-230ENST00000636768 SCAF11Q99590 1463 aaKnown RBP22.93■■□□□ 1.26
CACNA1A-230ENST00000636768 UBAP1LF5GYI3 381 aa22.92■■□□□ 1.26
CACNA1A-230ENST00000636768 CPS1P31327 1500 aa22.92■■□□□ 1.26
CACNA1A-230ENST00000636768 IQGAP1P46940 1657 aa22.91■■□□□ 1.26
CACNA1A-230ENST00000636768 IDI1Q13907 227 aa22.91■■□□□ 1.26
CACNA1A-230ENST00000636768 TXNDC2Q86VQ3 553 aa22.91■■□□□ 1.26
CACNA1A-230ENST00000636768 EID1Q9Y6B2 187 aa22.91■■□□□ 1.26
CACNA1A-230ENST00000636768 NOS1P29475 1434 aa22.91■■□□□ 1.26
CACNA1A-230ENST00000636768 SLIT1O75093 1534 aa22.9■■□□□ 1.26
CACNA1A-230ENST00000636768 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
CACNA1A-230ENST00000636768 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
CACNA1A-230ENST00000636768 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-230ENST00000636768 SYNMO15061 1565 aa22.89■■□□□ 1.25
CACNA1A-230ENST00000636768 LTKP29376 864 aa22.88■■□□□ 1.25
CACNA1A-230ENST00000636768 TMEM2Q9UHN6 1383 aa22.88■■□□□ 1.25
CACNA1A-230ENST00000636768 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
CACNA1A-230ENST00000636768 UNC13BO14795 1591 aa22.87■■□□□ 1.25
CACNA1A-230ENST00000636768 TET3O43151 1660 aa22.85■■□□□ 1.25
CACNA1A-230ENST00000636768 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
CACNA1A-230ENST00000636768 NUP155O75694 1391 aa22.83■■□□□ 1.25
CACNA1A-230ENST00000636768 ADGRB3O60242 1522 aa22.82■■□□□ 1.24
CACNA1A-230ENST00000636768 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
CACNA1A-230ENST00000636768 TOM1O60784 492 aa22.79■■□□□ 1.24
CACNA1A-230ENST00000636768 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
CACNA1A-230ENST00000636768 GCC2Q8IWJ2 1684 aa22.78■■□□□ 1.24
CACNA1A-230ENST00000636768 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
CACNA1A-230ENST00000636768 PIP4K2BP78356 416 aa22.76■■□□□ 1.23
CACNA1A-230ENST00000636768 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
CACNA1A-230ENST00000636768 LRRC7Q96NW7 1537 aa22.74■■□□□ 1.23
CACNA1A-230ENST00000636768 BCANQ96GW7 911 aa22.74■■□□□ 1.23
CACNA1A-230ENST00000636768 E9PCH4 1651 aa22.73■■□□□ 1.23
CACNA1A-230ENST00000636768 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-230ENST00000636768 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-230ENST00000636768 SLC26A8Q96RN1 970 aa22.71■■□□□ 1.23
CACNA1A-230ENST00000636768 STRCP1A6NGW2 1772 aa22.71■■□□□ 1.23
CACNA1A-230ENST00000636768 RIMS2Q9UQ26 1411 aa22.7■■□□□ 1.22
CACNA1A-230ENST00000636768 ZFYVE9O95405 1425 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms