RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 KANK4Q5T7N3 995 aaPredicted RBP25.34■■□□□ 1.65
CACNA1A-229ENST00000636670 RGS17Q9UGC6 210 aaPredicted RBP25.34■■□□□ 1.65
CACNA1A-229ENST00000636670 KIAA1107Q9UPP5 1409 aa25.33■■□□□ 1.65
CACNA1A-229ENST00000636670 ALKQ9UM73 1620 aa25.33■■□□□ 1.65
CACNA1A-229ENST00000636670 CAMSAP2Q08AD1 1489 aa25.32■■□□□ 1.64
CACNA1A-229ENST00000636670 POLR1AO95602 1720 aaPredicted RBP25.32■■□□□ 1.64
CACNA1A-229ENST00000636670 NEURL4Q96JN8 1562 aa25.31■■□□□ 1.64
CACNA1A-229ENST00000636670 MYOM3Q5VTT5 1437 aa25.31■■□□□ 1.64
CACNA1A-229ENST00000636670 CFDP1Q9UEE9 299 aaPredicted RBP25.31■■□□□ 1.64
CACNA1A-229ENST00000636670 A2MP01023 1474 aa25.3■■□□□ 1.64
CACNA1A-229ENST00000636670 ZNF777Q9ULD5 760 aaPredicted RBP25.3■■□□□ 1.64
CACNA1A-229ENST00000636670 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
CACNA1A-229ENST00000636670 ANKLE2Q86XL3 938 aa25.29■■□□□ 1.64
CACNA1A-229ENST00000636670 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
CACNA1A-229ENST00000636670 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
CACNA1A-229ENST00000636670 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
CACNA1A-229ENST00000636670 MIA2Q96PC5 1412 aa25.27■■□□□ 1.64
CACNA1A-229ENST00000636670 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
CACNA1A-229ENST00000636670 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.63
CACNA1A-229ENST00000636670 ATP7AQ04656 1500 aa25.26■■□□□ 1.63
CACNA1A-229ENST00000636670 PTPN23Q9H3S7 1636 aa25.23■■□□□ 1.63
CACNA1A-229ENST00000636670 MBD5Q9P267 1494 aa25.22■■□□□ 1.63
CACNA1A-229ENST00000636670 THEMISQ8N1K5 641 aaPredicted RBP25.22■■□□□ 1.63
CACNA1A-229ENST00000636670 CROCC2H7BZ55 1655 aa25.21■■□□□ 1.63
CACNA1A-229ENST00000636670 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
CACNA1A-229ENST00000636670 TNRQ92752 1358 aa25.2■■□□□ 1.63
CACNA1A-229ENST00000636670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.63
CACNA1A-229ENST00000636670 MED14O60244 1454 aa25.19■■□□□ 1.62
CACNA1A-229ENST00000636670 NPHP4O75161 1426 aaPredicted RBP25.19■■□□□ 1.62
CACNA1A-229ENST00000636670 ADGBQ8N7X0 1667 aa25.18■■□□□ 1.62
CACNA1A-229ENST00000636670 FBXO31Q5XUX0 539 aaPredicted RBP25.18■■□□□ 1.62
CACNA1A-229ENST00000636670 FGD6Q6ZV73 1430 aa25.17■■□□□ 1.62
CACNA1A-229ENST00000636670 LRRC7Q96NW7 1537 aa25.16■■□□□ 1.62
CACNA1A-229ENST00000636670 ZNF644Q9H582 1327 aaPredicted RBP25.15■■□□□ 1.62
CACNA1A-229ENST00000636670 MAST1Q9Y2H9 1570 aa25.15■■□□□ 1.62
CACNA1A-229ENST00000636670 POTEAQ6S8J7 498 aa25.14■■□□□ 1.62
CACNA1A-229ENST00000636670 RNF17Q9BXT8 1623 aaKnown RBP25.14■■□□□ 1.61
CACNA1A-229ENST00000636670 DEPDC5O75140 1603 aa25.13■■□□□ 1.61
CACNA1A-229ENST00000636670 RTEL1-TNFRSF6BF6WH68 1400 aa25.1■■□□□ 1.61
CACNA1A-229ENST00000636670 PZPP20742 1482 aa25.09■■□□□ 1.61
CACNA1A-229ENST00000636670 FAM135AQ9P2D6 1515 aa25.09■■□□□ 1.61
CACNA1A-229ENST00000636670 UGGT1Q9NYU2 1555 aa25.09■■□□□ 1.61
CACNA1A-229ENST00000636670 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
CACNA1A-229ENST00000636670 SYNMO15061 1565 aa25.08■■□□□ 1.61
CACNA1A-229ENST00000636670 IQGAP1P46940 1657 aa25.07■■□□□ 1.6
CACNA1A-229ENST00000636670 STRCP1A6NGW2 1772 aa25.07■■□□□ 1.6
CACNA1A-229ENST00000636670 RSPH4AQ5TD94 716 aa25.06■■□□□ 1.6
CACNA1A-229ENST00000636670 DHX29Q7Z478 1369 aaKnown RBP25.05■■□□□ 1.6
CACNA1A-229ENST00000636670 WASHC2CQ9Y4E1 1318 aa25.03■■□□□ 1.6
CACNA1A-229ENST00000636670 KIF3BO15066 747 aa25.01■■□□□ 1.59
CACNA1A-229ENST00000636670 KDM5DQ9BY66 1539 aa25.01■■□□□ 1.59
CACNA1A-229ENST00000636670 DAPK1P53355 1430 aa24.99■■□□□ 1.59
CACNA1A-229ENST00000636670 FAM135BQ49AJ0 1406 aa24.98■■□□□ 1.59
CACNA1A-229ENST00000636670 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
CACNA1A-229ENST00000636670 ABCC5O15440 1437 aa24.95■■□□□ 1.59
CACNA1A-229ENST00000636670 TSPY4P0CV99 314 aa24.92■■□□□ 1.58
CACNA1A-229ENST00000636670 TSPY10P0CW01 314 aa24.92■■□□□ 1.58
CACNA1A-229ENST00000636670 SETD1AO15047 1707 aaKnown RBP24.9■■□□□ 1.58
CACNA1A-229ENST00000636670 RRBP1Q9P2E9 1410 aaKnown RBP24.89■■□□□ 1.58
CACNA1A-229ENST00000636670 ZC3H13Q5T200 1668 aaKnown RBP24.89■■□□□ 1.58
CACNA1A-229ENST00000636670 DUOX2Q9NRD8 1548 aa24.89■■□□□ 1.57
CACNA1A-229ENST00000636670 ADGRL2O95490 1459 aa24.89■■□□□ 1.57
CACNA1A-229ENST00000636670 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
CACNA1A-229ENST00000636670 UPF1Q92900 1129 aaKnown RBP eCLIP24.87■■□□□ 1.57
CACNA1A-229ENST00000636670 XIRP1Q702N8 1843 aaKnown RBP24.86■■□□□ 1.57
CACNA1A-229ENST00000636670 FAM50AQ14320 339 aaKnown RBP24.83■■□□□ 1.57
CACNA1A-229ENST00000636670 SCAF11Q99590 1463 aaKnown RBP24.83■■□□□ 1.56
CACNA1A-229ENST00000636670 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
CACNA1A-229ENST00000636670 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
CACNA1A-229ENST00000636670 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
CACNA1A-229ENST00000636670 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
CACNA1A-229ENST00000636670 LTKP29376 864 aa24.79■■□□□ 1.56
CACNA1A-229ENST00000636670 MROH1Q8NDA8 1641 aa24.79■■□□□ 1.56
CACNA1A-229ENST00000636670 ROBO1Q9Y6N7 1651 aa24.78■■□□□ 1.56
CACNA1A-229ENST00000636670 PRDM15P57071 1507 aaPredicted RBP24.76■■□□□ 1.55
CACNA1A-229ENST00000636670 TMEM94Q12767 1356 aa24.76■■□□□ 1.55
CACNA1A-229ENST00000636670 ERVK-7P63135 1459 aa24.75■■□□□ 1.55
CACNA1A-229ENST00000636670 UBR1Q8IWV7 1749 aa24.75■■□□□ 1.55
CACNA1A-229ENST00000636670 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
CACNA1A-229ENST00000636670 JCADQ9P266 1359 aa24.74■■□□□ 1.55
CACNA1A-229ENST00000636670 CEP152O94986 1710 aa24.73■■□□□ 1.55
CACNA1A-229ENST00000636670 ARHGAP23Q9P227 1491 aa24.73■■□□□ 1.55
CACNA1A-229ENST00000636670 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
CACNA1A-229ENST00000636670 SLIT1O75093 1534 aa24.72■■□□□ 1.55
CACNA1A-229ENST00000636670 ROCK1Q13464 1354 aa24.72■■□□□ 1.55
CACNA1A-229ENST00000636670 ZNF772Q68DY9 489 aaPredicted RBP24.71■■□□□ 1.55
CACNA1A-229ENST00000636670 ABCC3O15438 1527 aa24.71■■□□□ 1.55
CACNA1A-229ENST00000636670 KCNA6P17658 529 aa24.69■■□□□ 1.54
CACNA1A-229ENST00000636670 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
CACNA1A-229ENST00000636670 PROSER2Q86WR7 435 aaPredicted RBP24.68■■□□□ 1.54
CACNA1A-229ENST00000636670 CHIC2Q9UKJ5 165 aa24.67■■□□□ 1.54
CACNA1A-229ENST00000636670 UNC13BO14795 1591 aa24.67■■□□□ 1.54
CACNA1A-229ENST00000636670 RRP7BPQ9NSQ0 103 aa24.65■■□□□ 1.54
CACNA1A-229ENST00000636670 PHLPP1O60346 1717 aa24.64■■□□□ 1.54
CACNA1A-229ENST00000636670 SLAIN2Q9P270 581 aa24.64■■□□□ 1.54
CACNA1A-229ENST00000636670 SPATA31A6Q5VVP1 1343 aa24.63■■□□□ 1.53
CACNA1A-229ENST00000636670 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
CACNA1A-229ENST00000636670 MEX3CQ5U5Q3 659 aaKnown RBP24.62■■□□□ 1.53
CACNA1A-229ENST00000636670 RBM33Q96EV2 1170 aaKnown RBP24.62■■□□□ 1.53
CACNA1A-229ENST00000636670 RXRBP28702 533 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms