RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	CALD1	Q05682	793 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	ITPRIP	Q8IWB1	547 aa		11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	U2SURP	O15042	1029 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	CHMP5	Q9NZZ3	219 aa		11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	CGNL1	Q0VF96	1302 aa		11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	KCNJ4	P48050	445 aa		11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	BRD4	O60885	1362 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	FAM13B	Q9NYF5	915 aa		11.41	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	ISY1	Q9ULR0	285 aa	Known RBP	11.41	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	KIAA2012	Q0VF49	1180 aa		11.41	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	MORC1	Q86VD1	984 aa		11.4	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	MRE11	P49959	708 aa		11.4	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	ATAD2B	Q9ULI0	1458 aa		11.4	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	DDX49	Q9Y6V7	483 aa	Known RBP	11.4	□□□□□ -0.58
ARHGEF9-222	ENST00000636048	NBPF8	Q3BBV2	869 aa		11.4	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	SKAP1	Q86WV1	359 aa		11.4	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	CHMP4A	Q9BY43	222 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	IGF1R	P08069	1367 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	ANKRD30A	Q9BXX3	1397 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	CSB-PGBD3	P0DP91	1061 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	CCDC9	Q9Y3X0	531 aa	Known RBP	11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	PRX	Q9BXM0	1461 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	MYOM3	Q5VTT5	1437 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	CLSTN1	O94985	981 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	BCL2L13	Q9BXK5	485 aa		11.39	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	C11orf95	C9JLR9	678 aa	Predicted RBP	11.38	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	NRDC	O43847	1150 aa		11.38	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	GOLGA6L6	A8MZA4	724 aa		11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048		E9PSI1	815 aa		11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	SRPK2	P78362	688 aa	Known RBP	11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	APAF1	O14727	1248 aa		11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	RTF1	Q92541	710 aa	Known RBP	11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	TIAM1	Q13009	1591 aa		11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	TRAK2	O60296	914 aa		11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	SMC4	Q9NTJ3	1288 aa		11.37	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	MAPKBP1	O60336	1514 aa		11.36	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.36	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	HFM1	A2PYH4	1435 aa		11.36	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	IPO8	O15397	1037 aa	Known RBP	11.36	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	RRP9	O43818	475 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.35	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	RRP7A	Q9Y3A4	280 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.35	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	SOX12	O15370	315 aa		11.34	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	TAOK2	Q9UL54	1235 aa		11.34	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	TDRD9	Q8NDG6	1382 aa	Known RBP	11.34	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	NCBP3	Q53F19	620 aa	Known RBP	11.34	□□□□□ -0.59
ARHGEF9-222	ENST00000636048	GGT6	Q6P531	493 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CFAP44	Q96MT7	982 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	C22orf23	Q9BZE7	217 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	ADAMTS8	Q9UP79	889 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	TPM2	P07951	284 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CUX1	P39880	1505 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	APBB1	O00213	710 aa		11.33	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	PANK1	Q8TE04	598 aa		11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	SYAP1	Q96A49	352 aa	Predicted RBP	11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	NCOA2	Q15596	1464 aa		11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CASKIN1	Q8WXD9	1431 aa		11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	EID1	Q9Y6B2	187 aa		11.32	□□□□□ -0.6
ARHGEF9-222	ENST00000636048		G3V3G9	751 aa		11.31	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	DCAF8	Q5TAQ9	597 aa		11.31	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	GOLGA6L4	A6NEF3	574 aa		11.31	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	DRC7	Q8IY82	874 aa		11.31	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	EIF3A	Q14152	1382 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	ESPN	B1AK53	854 aa		11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	NASP	P49321	788 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048		A0A0U1RQG5	324 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	MCC	P23508	829 aa		11.3	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	RBM10	P98175	930 aa	Known RBP	11.29	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	GRPEL1	Q9HAV7	217 aa		11.29	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	ZKSCAN2	Q63HK3	967 aa		11.29	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	HDAC5	Q9UQL6	1122 aa		11.29	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.29	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	FYCO1	Q9BQS8	1478 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	NAIP	Q13075	1403 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CARMIL2	Q6F5E8	1435 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	MCM4	P33991	863 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	MAP7D2	Q96T17	732 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	NCOA1	Q15788	1441 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	C20orf194	Q5TEA3	1177 aa		11.28	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CCDC144A	A2RUR9	1427 aa		11.27	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	ZNF644	Q9H582	1327 aa	Predicted RBP	11.27	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CSPP1	Q1MSJ5	1256 aa		11.27	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	ZMYND15	Q9H091	742 aa		11.27	□□□□□ -0.6
ARHGEF9-222	ENST00000636048	CFTR	P13569	1480 aa		11.27	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	WASHC2C	Q9Y4E1	1318 aa		11.27	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	EFCAB2	Q5VUJ9	269 aa		11.27	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	TOP2B	Q02880	1626 aa		11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	ST18	O60284	1047 aa		11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	KIAA1211	Q6ZU35	1233 aa		11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	MIA2	Q96PC5	1412 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms