RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FBXO31Q5XUX0 539 aaPredicted RBP29.9■■■□□ 2.38
CLN6-212ENST00000636020 ANKLE2Q86XL3 938 aa29.9■■■□□ 2.38
CLN6-212ENST00000636020 ADGBQ8N7X0 1667 aa29.88■■■□□ 2.37
CLN6-212ENST00000636020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.85■■■□□ 2.37
CLN6-212ENST00000636020 FYCO1Q9BQS8 1478 aa29.85■■■□□ 2.37
CLN6-212ENST00000636020 THEMISQ8N1K5 641 aaPredicted RBP29.83■■■□□ 2.37
CLN6-212ENST00000636020 MED14O60244 1454 aa29.82■■■□□ 2.36
CLN6-212ENST00000636020 CCNB3Q8WWL7 1395 aa29.82■■■□□ 2.36
CLN6-212ENST00000636020 PZPP20742 1482 aa29.81■■■□□ 2.36
CLN6-212ENST00000636020 NPHP4O75161 1426 aaPredicted RBP29.81■■■□□ 2.36
CLN6-212ENST00000636020 DHX29Q7Z478 1369 aaKnown RBP29.81■■■□□ 2.36
CLN6-212ENST00000636020 SENP3Q9H4L4 574 aaPredicted RBP29.8■■■□□ 2.36
CLN6-212ENST00000636020 RGS17Q9UGC6 210 aaPredicted RBP29.79■■■□□ 2.36
CLN6-212ENST00000636020 ZNF644Q9H582 1327 aaPredicted RBP29.77■■■□□ 2.36
CLN6-212ENST00000636020 RTEL1-TNFRSF6BF6WH68 1400 aa29.77■■■□□ 2.36
CLN6-212ENST00000636020 DEPDC5O75140 1603 aa29.76■■■□□ 2.35
CLN6-212ENST00000636020 MIA2Q96PC5 1412 aa29.76■■■□□ 2.35
CLN6-212ENST00000636020 MBD5Q9P267 1494 aa29.75■■■□□ 2.35
CLN6-212ENST00000636020 KIF3BO15066 747 aa29.75■■■□□ 2.35
CLN6-212ENST00000636020 LRRC7Q96NW7 1537 aa29.75■■■□□ 2.35
CLN6-212ENST00000636020 NLRP1Q9C000 1473 aa29.74■■■□□ 2.35
CLN6-212ENST00000636020 UGGT1Q9NYU2 1555 aa29.73■■■□□ 2.35
CLN6-212ENST00000636020 KDM5DQ9BY66 1539 aa29.72■■■□□ 2.35
CLN6-212ENST00000636020 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
CLN6-212ENST00000636020 WASHC2CQ9Y4E1 1318 aa29.71■■■□□ 2.35
CLN6-212ENST00000636020 STRCP1A6NGW2 1772 aa29.7■■■□□ 2.35
CLN6-212ENST00000636020 IQGAP1P46940 1657 aa29.69■■■□□ 2.34
CLN6-212ENST00000636020 RNF17Q9BXT8 1623 aaKnown RBP29.67■■■□□ 2.34
CLN6-212ENST00000636020 MTUS2Q5JR59 1369 aa29.65■■■□□ 2.34
CLN6-212ENST00000636020 SYNMO15061 1565 aa29.63■■■□□ 2.33
CLN6-212ENST00000636020 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
CLN6-212ENST00000636020 POTEAQ6S8J7 498 aa29.57■■■□□ 2.32
CLN6-212ENST00000636020 CCDC141Q6ZP82 1450 aa29.54■■■□□ 2.32
CLN6-212ENST00000636020 ZC3H13Q5T200 1668 aaKnown RBP29.51■■■□□ 2.31
CLN6-212ENST00000636020 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.31
CLN6-212ENST00000636020 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
CLN6-212ENST00000636020 FAM135BQ49AJ0 1406 aa29.47■■■□□ 2.31
CLN6-212ENST00000636020 CEP162Q5TB80 1403 aa29.47■■■□□ 2.31
CLN6-212ENST00000636020 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
CLN6-212ENST00000636020 ERVK-7P63135 1459 aa29.44■■■□□ 2.3
CLN6-212ENST00000636020 SCAF11Q99590 1463 aaKnown RBP29.44■■■□□ 2.3
CLN6-212ENST00000636020 XIRP1Q702N8 1843 aaKnown RBP29.44■■■□□ 2.3
CLN6-212ENST00000636020 LTKP29376 864 aa29.43■■■□□ 2.3
CLN6-212ENST00000636020 ABCC3O15438 1527 aa29.43■■■□□ 2.3
CLN6-212ENST00000636020 CAMSAP2Q08AD1 1489 aa29.42■■■□□ 2.3
CLN6-212ENST00000636020 TXNDC2Q86VQ3 553 aa29.4■■■□□ 2.3
CLN6-212ENST00000636020 NCOA2Q15596 1464 aa29.4■■■□□ 2.3
CLN6-212ENST00000636020 UBR1Q8IWV7 1749 aa29.4■■■□□ 2.3
CLN6-212ENST00000636020 ARHGAP23Q9P227 1491 aa29.38■■■□□ 2.29
CLN6-212ENST00000636020 TSPY4P0CV99 314 aa29.38■■■□□ 2.29
CLN6-212ENST00000636020 TSPY10P0CW01 314 aa29.38■■■□□ 2.29
CLN6-212ENST00000636020 SLIT1O75093 1534 aa29.35■■■□□ 2.29
CLN6-212ENST00000636020 ARHGEF5Q12774 1597 aa29.34■■■□□ 2.29
CLN6-212ENST00000636020 CFAP65Q6ZU64 1925 aaKnown RBP29.32■■■□□ 2.28
CLN6-212ENST00000636020 TMEM94Q12767 1356 aa29.3■■■□□ 2.28
CLN6-212ENST00000636020 EID1Q9Y6B2 187 aa29.29■■■□□ 2.28
CLN6-212ENST00000636020 SETD1AO15047 1707 aaKnown RBP29.28■■■□□ 2.28
CLN6-212ENST00000636020 MROH1Q8NDA8 1641 aa29.27■■■□□ 2.28
CLN6-212ENST00000636020 ROBO1Q9Y6N7 1651 aa29.27■■■□□ 2.28
CLN6-212ENST00000636020 EIF2AK4Q9P2K8 1649 aaKnown RBP29.24■■■□□ 2.27
CLN6-212ENST00000636020 KCNA6P17658 529 aa29.23■■■□□ 2.27
CLN6-212ENST00000636020 CEP152O94986 1710 aa29.23■■■□□ 2.27
CLN6-212ENST00000636020 MAST1Q9Y2H9 1570 aa29.22■■■□□ 2.27
CLN6-212ENST00000636020 TMEM2Q9UHN6 1383 aa29.21■■■□□ 2.27
CLN6-212ENST00000636020 MAP3K1Q13233 1512 aa29.2■■■□□ 2.27
CLN6-212ENST00000636020 PROSER2Q86WR7 435 aaPredicted RBP29.2■■■□□ 2.26
CLN6-212ENST00000636020 ARHGAP31Q2M1Z3 1444 aa29.2■■■□□ 2.26
CLN6-212ENST00000636020 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
CLN6-212ENST00000636020 LRRC9Q6ZRR7 1453 aa29.18■■■□□ 2.26
CLN6-212ENST00000636020 UPF1Q92900 1129 aaKnown RBP eCLIP29.17■■■□□ 2.26
CLN6-212ENST00000636020 JCADQ9P266 1359 aa29.16■■■□□ 2.26
CLN6-212ENST00000636020 PIK3C2BO00750 1634 aa29.13■■■□□ 2.25
CLN6-212ENST00000636020 SLC26A8Q96RN1 970 aa29.13■■■□□ 2.25
CLN6-212ENST00000636020 PRDM15P57071 1507 aaPredicted RBP29.12■■■□□ 2.25
CLN6-212ENST00000636020 SLAIN2Q9P270 581 aa29.12■■■□□ 2.25
CLN6-212ENST00000636020 TET3O43151 1660 aa29.12■■■□□ 2.25
CLN6-212ENST00000636020 STAG3Q9UJ98 1225 aa29.11■■■□□ 2.25
CLN6-212ENST00000636020 PHLPP1O60346 1717 aa29.1■■■□□ 2.25
CLN6-212ENST00000636020 DUOX2Q9NRD8 1548 aa29.09■■■□□ 2.25
CLN6-212ENST00000636020 MSH6P52701 1360 aa29.08■■■□□ 2.25
CLN6-212ENST00000636020 NKTRP30414 1462 aaKnown RBP29.07■■■□□ 2.24
CLN6-212ENST00000636020 EFCAB6Q5THR3 1501 aa29.06■■■□□ 2.24
CLN6-212ENST00000636020 IDI1Q13907 227 aa29.06■■■□□ 2.24
CLN6-212ENST00000636020 KDM5AP29375 1690 aaKnown RBP29.04■■■□□ 2.24
CLN6-212ENST00000636020 SRCAPQ6ZRS2 3230 aa29.04■■■□□ 2.24
CLN6-212ENST00000636020 NWD1Q149M9 1564 aa29.04■■■□□ 2.24
CLN6-212ENST00000636020 ZNF772Q68DY9 489 aaPredicted RBP29.03■■■□□ 2.24
CLN6-212ENST00000636020 TRIM52Q96A61 297 aa29.03■■■□□ 2.24
CLN6-212ENST00000636020 LRP6O75581 1613 aa29.02■■■□□ 2.24
CLN6-212ENST00000636020 SPATA31A6Q5VVP1 1343 aa29.01■■■□□ 2.23
CLN6-212ENST00000636020 COL16A1Q07092 1604 aaPredicted RBP29.01■■■□□ 2.23
CLN6-212ENST00000636020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.23
CLN6-212ENST00000636020 FGD6Q6ZV73 1430 aa28.98■■■□□ 2.23
CLN6-212ENST00000636020 KIF15Q9NS87 1388 aa28.98■■■□□ 2.23
CLN6-212ENST00000636020 ERBINQ96RT1 1412 aa28.97■■■□□ 2.23
CLN6-212ENST00000636020 MEX3CQ5U5Q3 659 aaKnown RBP28.97■■■□□ 2.23
CLN6-212ENST00000636020 MYOM3Q5VTT5 1437 aa28.95■■■□□ 2.23
CLN6-212ENST00000636020 RRP7BPQ9NSQ0 103 aa28.93■■■□□ 2.22
CLN6-212ENST00000636020 KANK1Q14678 1352 aa28.92■■■□□ 2.22
CLN6-212ENST00000636020 RXRBP28702 533 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms