RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 NCOA1Q15788 1441 aa17.77■□□□□ 0.43
SPTAN1-229ENST00000636010 GGT6Q6P531 493 aa17.75■□□□□ 0.43
SPTAN1-229ENST00000636010 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
SPTAN1-229ENST00000636010 KIF3BO15066 747 aa17.75■□□□□ 0.43
SPTAN1-229ENST00000636010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
SPTAN1-229ENST00000636010 ZC3H13Q5T200 1668 aaKnown RBP17.75■□□□□ 0.43
SPTAN1-229ENST00000636010 PREX1Q8TCU6 1659 aa17.75■□□□□ 0.43
SPTAN1-229ENST00000636010 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
SPTAN1-229ENST00000636010 ANKRD30AQ9BXX3 1397 aa17.73■□□□□ 0.43
SPTAN1-229ENST00000636010 ITGAEP38570 1179 aa17.73■□□□□ 0.43
SPTAN1-229ENST00000636010 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
SPTAN1-229ENST00000636010 KDM5DQ9BY66 1539 aa17.73■□□□□ 0.43
SPTAN1-229ENST00000636010 ERBINQ96RT1 1412 aa17.73■□□□□ 0.43
SPTAN1-229ENST00000636010 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
SPTAN1-229ENST00000636010 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
SPTAN1-229ENST00000636010 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
SPTAN1-229ENST00000636010 FBXO41Q8TF61 875 aa17.71■□□□□ 0.43
SPTAN1-229ENST00000636010 ABCC3O15438 1527 aa17.7■□□□□ 0.42
SPTAN1-229ENST00000636010 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
SPTAN1-229ENST00000636010 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
SPTAN1-229ENST00000636010 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
SPTAN1-229ENST00000636010 UNC13BO14795 1591 aa17.68■□□□□ 0.42
SPTAN1-229ENST00000636010 MYO3AQ8NEV4 1616 aa17.67■□□□□ 0.42
SPTAN1-229ENST00000636010 VWDEQ8N2E2 1590 aa17.66■□□□□ 0.42
SPTAN1-229ENST00000636010 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
SPTAN1-229ENST00000636010 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
SPTAN1-229ENST00000636010 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
SPTAN1-229ENST00000636010 ANKRD50Q9ULJ7 1429 aa17.65■□□□□ 0.42
SPTAN1-229ENST00000636010 ZNF142P52746 1687 aaPredicted RBP17.63■□□□□ 0.41
SPTAN1-229ENST00000636010 PZPP20742 1482 aa17.61■□□□□ 0.41
SPTAN1-229ENST00000636010 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
SPTAN1-229ENST00000636010 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
SPTAN1-229ENST00000636010 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
SPTAN1-229ENST00000636010 TET3O43151 1660 aa17.59■□□□□ 0.41
SPTAN1-229ENST00000636010 NAIPQ13075 1403 aa17.59■□□□□ 0.41
SPTAN1-229ENST00000636010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.415e-7■□□□□ 9.3
SPTAN1-229ENST00000636010 E9PCH4 1651 aa17.58■□□□□ 0.41
SPTAN1-229ENST00000636010 NPATQ14207 1427 aa17.58■□□□□ 0.4
SPTAN1-229ENST00000636010 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
SPTAN1-229ENST00000636010 SPATA31D1Q6ZQQ2 1576 aa17.58■□□□□ 0.4
SPTAN1-229ENST00000636010 EFCAB6Q5THR3 1501 aa17.58■□□□□ 0.4
SPTAN1-229ENST00000636010 LMTK2Q8IWU2 1503 aa17.58■□□□□ 0.4
SPTAN1-229ENST00000636010 FBXO31Q5XUX0 539 aaPredicted RBP17.56■□□□□ 0.4
SPTAN1-229ENST00000636010 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
SPTAN1-229ENST00000636010 UHRF1BP1Q6BDS2 1440 aa17.56■□□□□ 0.4
SPTAN1-229ENST00000636010 HSPA2P54652 639 aa17.55■□□□□ 0.4
SPTAN1-229ENST00000636010 ERVK-7P63135 1459 aa17.54■□□□□ 0.4
SPTAN1-229ENST00000636010 HFM1A2PYH4 1435 aa17.53■□□□□ 0.4
SPTAN1-229ENST00000636010 SYNMO15061 1565 aa17.53■□□□□ 0.4
SPTAN1-229ENST00000636010 MYO5BQ9ULV0 1848 aa17.53■□□□□ 0.4
SPTAN1-229ENST00000636010 KANK1Q14678 1352 aa17.51■□□□□ 0.39
SPTAN1-229ENST00000636010 ARHGAP31Q2M1Z3 1444 aa17.51■□□□□ 0.39
SPTAN1-229ENST00000636010 UBR1Q8IWV7 1749 aa17.51■□□□□ 0.39
SPTAN1-229ENST00000636010 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
SPTAN1-229ENST00000636010 TNRQ92752 1358 aa17.5■□□□□ 0.39
SPTAN1-229ENST00000636010 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
SPTAN1-229ENST00000636010 SPHKAPQ2M3C7 1700 aa17.48■□□□□ 0.39
SPTAN1-229ENST00000636010 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
SPTAN1-229ENST00000636010 NUP155O75694 1391 aa17.45■□□□□ 0.38
SPTAN1-229ENST00000636010 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
SPTAN1-229ENST00000636010 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
SPTAN1-229ENST00000636010 NOS1P29475 1434 aa17.43■□□□□ 0.38
SPTAN1-229ENST00000636010 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
SPTAN1-229ENST00000636010 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
SPTAN1-229ENST00000636010 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
SPTAN1-229ENST00000636010 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
SPTAN1-229ENST00000636010 NEURL4Q96JN8 1562 aa17.4■□□□□ 0.38
SPTAN1-229ENST00000636010 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
SPTAN1-229ENST00000636010 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
SPTAN1-229ENST00000636010 ADGRB3O60242 1522 aa17.37■□□□□ 0.37
SPTAN1-229ENST00000636010 TMEM131LA2VDJ0 1609 aa17.36■□□□□ 0.37
SPTAN1-229ENST00000636010 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
SPTAN1-229ENST00000636010 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
SPTAN1-229ENST00000636010 KIF1BO60333 1816 aa17.34■□□□□ 0.37
SPTAN1-229ENST00000636010 TRIM52Q96A61 297 aa17.33■□□□□ 0.37
SPTAN1-229ENST00000636010 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
SPTAN1-229ENST00000636010 TRPM2O94759 1503 aa17.32■□□□□ 0.36
SPTAN1-229ENST00000636010 IDI1Q13907 227 aa17.32■□□□□ 0.36
SPTAN1-229ENST00000636010 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
SPTAN1-229ENST00000636010 SLIT1O75093 1534 aa17.31■□□□□ 0.36
SPTAN1-229ENST00000636010 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
SPTAN1-229ENST00000636010 PTPRTO14522 1441 aa17.3■□□□□ 0.36
SPTAN1-229ENST00000636010 PKD2Q13563 968 aa17.27■□□□□ 0.36
SPTAN1-229ENST00000636010 FOXD1Q16676 465 aa17.27■□□□□ 0.36
SPTAN1-229ENST00000636010 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
SPTAN1-229ENST00000636010 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
SPTAN1-229ENST00000636010 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
SPTAN1-229ENST00000636010 MED14O60244 1454 aa17.25■□□□□ 0.35
SPTAN1-229ENST00000636010 SCAF11Q99590 1463 aaKnown RBP17.25■□□□□ 0.35
SPTAN1-229ENST00000636010 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
SPTAN1-229ENST00000636010 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
SPTAN1-229ENST00000636010 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
SPTAN1-229ENST00000636010 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
SPTAN1-229ENST00000636010 LTKP29376 864 aa17.22■□□□□ 0.35
SPTAN1-229ENST00000636010 PPLO60437 1756 aa17.22■□□□□ 0.35
SPTAN1-229ENST00000636010 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
SPTAN1-229ENST00000636010 ZFYVE9O95405 1425 aa17.22■□□□□ 0.35
SPTAN1-229ENST00000636010 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
SPTAN1-229ENST00000636010 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
SPTAN1-229ENST00000636010 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms