RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 RIMBP3CA6NJZ7 1639 aa14.39□□□□□ -0.11
SYNGAP1-209ENST00000635885 RIMBP3BA6NNM3 1639 aa14.39□□□□□ -0.11
SYNGAP1-209ENST00000635885 TRPM1Q7Z4N2 1603 aa14.39□□□□□ -0.11
SYNGAP1-209ENST00000635885 RIMBP3Q9UFD9 1639 aa14.39□□□□□ -0.11
SYNGAP1-209ENST00000635885 PLA2R1Q13018 1463 aa14.38□□□□□ -0.11
SYNGAP1-209ENST00000635885 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
SYNGAP1-209ENST00000635885 RTEL1-TNFRSF6BF6WH68 1400 aa14.38□□□□□ -0.11
SYNGAP1-209ENST00000635885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
SYNGAP1-209ENST00000635885 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
SYNGAP1-209ENST00000635885 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-209ENST00000635885 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
SYNGAP1-209ENST00000635885 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-209ENST00000635885 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
SYNGAP1-209ENST00000635885 DEPDC5O75140 1603 aa14.35□□□□□ -0.11
SYNGAP1-209ENST00000635885 E9PCH4 1651 aa14.35□□□□□ -0.11
SYNGAP1-209ENST00000635885 ARID4BQ4LE39 1312 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-209ENST00000635885 LAMC1P11047 1609 aa14.34□□□□□ -0.11
SYNGAP1-209ENST00000635885 ATP10AO60312 1499 aa14.34□□□□□ -0.11
SYNGAP1-209ENST00000635885 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
SYNGAP1-209ENST00000635885 SPAG9O60271 1321 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-209ENST00000635885 PRKRIP1Q9H875 184 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-209ENST00000635885 PRAG1Q86YV5 1406 aa14.32□□□□□ -0.12
SYNGAP1-209ENST00000635885 A2MP01023 1474 aa14.32□□□□□ -0.12
SYNGAP1-209ENST00000635885 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
SYNGAP1-209ENST00000635885 CEP152O94986 1710 aa14.32□□□□□ -0.12
SYNGAP1-209ENST00000635885 SPHKAPQ2M3C7 1700 aa14.32□□□□□ -0.12
SYNGAP1-209ENST00000635885 FANCAO15360 1455 aa14.31□□□□□ -0.12
SYNGAP1-209ENST00000635885 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
SYNGAP1-209ENST00000635885 EIF2AK4Q9P2K8 1649 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-209ENST00000635885 TET3O43151 1660 aa14.31□□□□□ -0.12
SYNGAP1-209ENST00000635885 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
SYNGAP1-209ENST00000635885 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
SYNGAP1-209ENST00000635885 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
SYNGAP1-209ENST00000635885 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-209ENST00000635885 CD109Q6YHK3 1445 aa14.28□□□□□ -0.12
SYNGAP1-209ENST00000635885 VWDEQ8N2E2 1590 aa14.28□□□□□ -0.12
SYNGAP1-209ENST00000635885 ADGRL1O94910 1474 aa14.27□□□□□ -0.12
SYNGAP1-209ENST00000635885 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
SYNGAP1-209ENST00000635885 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
SYNGAP1-209ENST00000635885 PRDM15P57071 1507 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-209ENST00000635885 SCAPERQ9BY12 1400 aa14.26□□□□□ -0.13
SYNGAP1-209ENST00000635885 GPRASP1Q5JY77 1395 aa14.26□□□□□ -0.13
SYNGAP1-209ENST00000635885 RGL3Q3MIN7 710 aa14.26□□□□□ -0.13
SYNGAP1-209ENST00000635885 RNF17Q9BXT8 1623 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-209ENST00000635885 TRPM2O94759 1503 aa14.25□□□□□ -0.13
SYNGAP1-209ENST00000635885 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
SYNGAP1-209ENST00000635885 HNRNPUQ00839 825 aaKnown RBP eCLIP14.25□□□□□ -0.13
SYNGAP1-209ENST00000635885 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
SYNGAP1-209ENST00000635885 CLTCL1P53675 1640 aa14.25□□□□□ -0.13
SYNGAP1-209ENST00000635885 MROH1Q8NDA8 1641 aa14.24□□□□□ -0.13
SYNGAP1-209ENST00000635885 GLI2P10070 1586 aa14.24□□□□□ -0.13
SYNGAP1-209ENST00000635885 PTPRTO14522 1441 aa14.24□□□□□ -0.13
SYNGAP1-209ENST00000635885 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
SYNGAP1-209ENST00000635885 MADDQ8WXG6 1647 aa14.23□□□□□ -0.13
SYNGAP1-209ENST00000635885 FKBP8Q14318 412 aa14.22□□□□□ -0.13
SYNGAP1-209ENST00000635885 NBPF1Q3BBV0 1214 aa14.22□□□□□ -0.13
SYNGAP1-209ENST00000635885 NEO1Q92859 1461 aa14.22□□□□□ -0.13
SYNGAP1-209ENST00000635885 KIF1BO60333 1816 aa14.22□□□□□ -0.13
SYNGAP1-209ENST00000635885 KANK1Q14678 1352 aa14.22□□□□□ -0.13
SYNGAP1-209ENST00000635885 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
SYNGAP1-209ENST00000635885 NEFLP07196 543 aa14.19□□□□□ -0.14
SYNGAP1-209ENST00000635885 FAM69CQ0P6D2 419 aa14.19□□□□□ -0.14
SYNGAP1-209ENST00000635885 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
SYNGAP1-209ENST00000635885 NEURL4Q96JN8 1562 aa14.18□□□□□ -0.14
SYNGAP1-209ENST00000635885 FAM9BQ8IZU0 186 aa14.18□□□□□ -0.14
SYNGAP1-209ENST00000635885 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
SYNGAP1-209ENST00000635885 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
SYNGAP1-209ENST00000635885 KIF3BO15066 747 aa14.17□□□□□ -0.14
SYNGAP1-209ENST00000635885 ZNF518AQ6AHZ1 1483 aa14.17□□□□□ -0.14
SYNGAP1-209ENST00000635885 IFT172Q9UG01 1749 aa14.16□□□□□ -0.14
SYNGAP1-209ENST00000635885 PPRC1Q5VV67 1664 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-209ENST00000635885 CFAP65Q6ZU64 1925 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-209ENST00000635885 EFCAB6Q5THR3 1501 aa14.15□□□□□ -0.14
SYNGAP1-209ENST00000635885 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
SYNGAP1-209ENST00000635885 HECW2Q9P2P5 1572 aa14.14□□□□□ -0.15
SYNGAP1-209ENST00000635885 KTN1Q86UP2 1357 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-209ENST00000635885 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
SYNGAP1-209ENST00000635885 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
SYNGAP1-209ENST00000635885 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
SYNGAP1-209ENST00000635885 MAP3K4Q9Y6R4 1608 aa14.13□□□□□ -0.15
SYNGAP1-209ENST00000635885 BCANQ96GW7 911 aa14.13□□□□□ -0.15
SYNGAP1-209ENST00000635885 TESK2Q96S53 571 aa14.13□□□□□ -0.15
SYNGAP1-209ENST00000635885 MROH2AA6NES4 1674 aa14.13□□□□□ -0.15
SYNGAP1-209ENST00000635885 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
SYNGAP1-209ENST00000635885 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
SYNGAP1-209ENST00000635885 RALBP1Q15311 655 aa14.12□□□□□ -0.15
SYNGAP1-209ENST00000635885 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
SYNGAP1-209ENST00000635885 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
SYNGAP1-209ENST00000635885 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
SYNGAP1-209ENST00000635885 FRMPD1Q5SYB0 1578 aa14.11□□□□□ -0.15
SYNGAP1-209ENST00000635885 MYBBP1AQ9BQG0 1328 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-209ENST00000635885 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-209ENST00000635885 TMF1P82094 1093 aa14.09□□□□□ -0.15
SYNGAP1-209ENST00000635885 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
SYNGAP1-209ENST00000635885 UGGT1Q9NYU2 1555 aa14.09□□□□□ -0.15
SYNGAP1-209ENST00000635885 MYOM2P54296 1465 aa14.08□□□□□ -0.16
SYNGAP1-209ENST00000635885 RICTORQ6R327 1708 aa14.08□□□□□ -0.16
SYNGAP1-209ENST00000635885 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-209ENST00000635885 SCAF11Q99590 1463 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-209ENST00000635885 PPLO60437 1756 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms