RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ERBINQ96RT1 1412 aa26.02■■□□□ 1.76
LIN28B-202ENST00000635857 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
LIN28B-202ENST00000635857 PREX1Q8TCU6 1659 aa26■■□□□ 1.75
LIN28B-202ENST00000635857 RNF17Q9BXT8 1623 aaKnown RBP26■■□□□ 1.75
LIN28B-202ENST00000635857 ADGRL2O95490 1459 aa25.99■■□□□ 1.75
LIN28B-202ENST00000635857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.99■■□□□ 1.75
LIN28B-202ENST00000635857 ZMYM3Q14202 1370 aa25.97■■□□□ 1.75
LIN28B-202ENST00000635857 WASHC2CQ9Y4E1 1318 aa25.97■■□□□ 1.75
LIN28B-202ENST00000635857 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
LIN28B-202ENST00000635857 ZC3H13Q5T200 1668 aaKnown RBP25.96■■□□□ 1.75
LIN28B-202ENST00000635857 SETD1BQ9UPS6 1966 aaKnown RBP25.95■■□□□ 1.74
LIN28B-202ENST00000635857 LMTK3Q96Q04 1460 aa25.94■■□□□ 1.74
LIN28B-202ENST00000635857 ITGAEP38570 1179 aa25.94■■□□□ 1.74
LIN28B-202ENST00000635857 UHRF1BP1Q6BDS2 1440 aa25.94■■□□□ 1.74
LIN28B-202ENST00000635857 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
LIN28B-202ENST00000635857 NPATQ14207 1427 aa25.92■■□□□ 1.74
LIN28B-202ENST00000635857 KANK1Q14678 1352 aa25.9■■□□□ 1.74
LIN28B-202ENST00000635857 ROCK1Q13464 1354 aa25.88■■□□□ 1.73
LIN28B-202ENST00000635857 PRDM15P57071 1507 aaPredicted RBP25.88■■□□□ 1.73
LIN28B-202ENST00000635857 DEPDC5O75140 1603 aa25.87■■□□□ 1.73
LIN28B-202ENST00000635857 MROH1Q8NDA8 1641 aa25.87■■□□□ 1.73
LIN28B-202ENST00000635857 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
LIN28B-202ENST00000635857 CEP152O94986 1710 aa25.86■■□□□ 1.73
LIN28B-202ENST00000635857 ABCC3O15438 1527 aa25.86■■□□□ 1.73
LIN28B-202ENST00000635857 PTPRKQ15262 1439 aa25.86■■□□□ 1.73
LIN28B-202ENST00000635857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.85■■□□□ 1.736e-9■■■■□ 21.2
LIN28B-202ENST00000635857 PZPP20742 1482 aa25.85■■□□□ 1.73
LIN28B-202ENST00000635857 CAMSAP1Q5T5Y3 1602 aa25.82■■□□□ 1.72
LIN28B-202ENST00000635857 MYO3AQ8NEV4 1616 aa25.81■■□□□ 1.72
LIN28B-202ENST00000635857 HSPA2P54652 639 aa25.81■■□□□ 1.72
LIN28B-202ENST00000635857 TNRQ92752 1358 aa25.77■■□□□ 1.72
LIN28B-202ENST00000635857 ZNF142P52746 1687 aaPredicted RBP25.76■■□□□ 1.71
LIN28B-202ENST00000635857 CEP170BQ9Y4F5 1589 aaPredicted RBP25.73■■□□□ 1.71
LIN28B-202ENST00000635857 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
LIN28B-202ENST00000635857 LMTK2Q8IWU2 1503 aa25.72■■□□□ 1.71
LIN28B-202ENST00000635857 UNC13BO14795 1591 aa25.71■■□□□ 1.71
LIN28B-202ENST00000635857 VWDEQ8N2E2 1590 aa25.71■■□□□ 1.71
LIN28B-202ENST00000635857 ARHGAP31Q2M1Z3 1444 aa25.7■■□□□ 1.7
LIN28B-202ENST00000635857 SPATA31D1Q6ZQQ2 1576 aa25.69■■□□□ 1.7
LIN28B-202ENST00000635857 A2ML1A8K2U0 1454 aa25.69■■□□□ 1.7
LIN28B-202ENST00000635857 ERVK-7P63135 1459 aa25.69■■□□□ 1.7
LIN28B-202ENST00000635857 CFAP65Q6ZU64 1925 aaKnown RBP25.69■■□□□ 1.7
LIN28B-202ENST00000635857 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
LIN28B-202ENST00000635857 NLRP1Q9C000 1473 aa25.68■■□□□ 1.7
LIN28B-202ENST00000635857 EFCAB6Q5THR3 1501 aa25.67■■□□□ 1.7
LIN28B-202ENST00000635857 TET3O43151 1660 aa25.64■■□□□ 1.7
LIN28B-202ENST00000635857 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
LIN28B-202ENST00000635857 IQGAP3Q86VI3 1631 aa25.62■■□□□ 1.69
LIN28B-202ENST00000635857 HFM1A2PYH4 1435 aa25.61■■□□□ 1.69
LIN28B-202ENST00000635857 NAIPQ13075 1403 aa25.61■■□□□ 1.69
LIN28B-202ENST00000635857 UGGT1Q9NYU2 1555 aa25.61■■□□□ 1.69
LIN28B-202ENST00000635857 NUP155O75694 1391 aa25.6■■□□□ 1.69
LIN28B-202ENST00000635857 STRCQ7RTU9 1775 aa25.6■■□□□ 1.69
LIN28B-202ENST00000635857 PLA2R1Q13018 1463 aa25.6■■□□□ 1.69
LIN28B-202ENST00000635857 RPRD2Q5VT52 1461 aaKnown RBP25.6■■□□□ 1.69
LIN28B-202ENST00000635857 THEMISQ8N1K5 641 aaPredicted RBP25.56■■□□□ 1.68
LIN28B-202ENST00000635857 PKD2Q13563 968 aa25.54■■□□□ 1.68
LIN28B-202ENST00000635857 STAG3Q9UJ98 1225 aa25.52■■□□□ 1.68
LIN28B-202ENST00000635857 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.68
LIN28B-202ENST00000635857 E9PCH4 1651 aa25.51■■□□□ 1.67
LIN28B-202ENST00000635857 PTPRTO14522 1441 aa25.5■■□□□ 1.67
LIN28B-202ENST00000635857 UBR1Q8IWV7 1749 aa25.5■■□□□ 1.67
LIN28B-202ENST00000635857 TRIM52Q96A61 297 aa25.5■■□□□ 1.67
LIN28B-202ENST00000635857 SYNMO15061 1565 aa25.49■■□□□ 1.67
LIN28B-202ENST00000635857 NOS1P29475 1434 aa25.49■■□□□ 1.67
LIN28B-202ENST00000635857 PIK3C2BO00750 1634 aa25.48■■□□□ 1.67
LIN28B-202ENST00000635857 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
LIN28B-202ENST00000635857 ANKLE2Q86XL3 938 aa25.46■■□□□ 1.67
LIN28B-202ENST00000635857 SLC52A1Q9NWF4 448 aa25.46■■□□□ 1.67
LIN28B-202ENST00000635857 KDM5AP29375 1690 aaKnown RBP25.45■■□□□ 1.67
LIN28B-202ENST00000635857 ACIN1Q9UKV3 1341 aaKnown RBP25.42■■□□□ 1.66
LIN28B-202ENST00000635857 ADGRB3O60242 1522 aa25.42■■□□□ 1.66
LIN28B-202ENST00000635857 IDI1Q13907 227 aa25.41■■□□□ 1.66
LIN28B-202ENST00000635857 SPHKAPQ2M3C7 1700 aa25.4■■□□□ 1.66
LIN28B-202ENST00000635857 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
LIN28B-202ENST00000635857 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
LIN28B-202ENST00000635857 NEURL4Q96JN8 1562 aa25.37■■□□□ 1.65
LIN28B-202ENST00000635857 SLIT1O75093 1534 aa25.37■■□□□ 1.65
LIN28B-202ENST00000635857 SLC4A1APQ9BWU0 796 aaKnown RBP25.36■■□□□ 1.65
LIN28B-202ENST00000635857 NPHP4O75161 1426 aaPredicted RBP25.35■■□□□ 1.65
LIN28B-202ENST00000635857 SCAF11Q99590 1463 aaKnown RBP25.34■■□□□ 1.65
LIN28B-202ENST00000635857 IQGAP1P46940 1657 aa25.34■■□□□ 1.65
LIN28B-202ENST00000635857 CHGAP10645 457 aaKnown RBP25.34■■□□□ 1.65
LIN28B-202ENST00000635857 ARHGAP23Q9P227 1491 aa25.34■■□□□ 1.65
LIN28B-202ENST00000635857 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
LIN28B-202ENST00000635857 MED14O60244 1454 aa25.33■■□□□ 1.65
LIN28B-202ENST00000635857 TXNDC2Q86VQ3 553 aa25.32■■□□□ 1.64
LIN28B-202ENST00000635857 MYO5BQ9ULV0 1848 aa25.3■■□□□ 1.64
LIN28B-202ENST00000635857 TMEM131LA2VDJ0 1609 aa25.3■■□□□ 1.64
LIN28B-202ENST00000635857 TRPM2O94759 1503 aa25.29■■□□□ 1.64
LIN28B-202ENST00000635857 HDGFP51858 240 aaKnown RBP25.29■■□□□ 1.64
LIN28B-202ENST00000635857 RAB3GAP2Q9H2M9 1393 aa25.27■■□□□ 1.64
LIN28B-202ENST00000635857 PPP1R15AO75807 674 aaPredicted RBP25.25■■□□□ 1.63
LIN28B-202ENST00000635857 CERKQ8TCT0 537 aa25.25■■□□□ 1.63
LIN28B-202ENST00000635857 LTKP29376 864 aa25.24■■□□□ 1.63
LIN28B-202ENST00000635857 ZNF335Q9H4Z2 1342 aaPredicted RBP25.23■■□□□ 1.63
LIN28B-202ENST00000635857 KIF1BO60333 1816 aa25.23■■□□□ 1.63
LIN28B-202ENST00000635857 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
LIN28B-202ENST00000635857 RIMS2Q9UQ26 1411 aa25.22■■□□□ 1.63
LIN28B-202ENST00000635857 BCANQ96GW7 911 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms