RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
UBASH3A-209ENST00000635325 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.37
UBASH3A-209ENST00000635325 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.37
UBASH3A-209ENST00000635325 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.37
UBASH3A-209ENST00000635325 UNC13BO14795 1591 aa17.33■□□□□ 0.36
UBASH3A-209ENST00000635325 USP47Q96K76 1375 aa17.33■□□□□ 0.36
UBASH3A-209ENST00000635325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBASH3A-209ENST00000635325 NEO1Q92859 1461 aa17.32■□□□□ 0.36
UBASH3A-209ENST00000635325 SCAPERQ9BY12 1400 aa17.31■□□□□ 0.36
UBASH3A-209ENST00000635325 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
UBASH3A-209ENST00000635325 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
UBASH3A-209ENST00000635325 PLA2R1Q13018 1463 aa17.29■□□□□ 0.36
UBASH3A-209ENST00000635325 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
UBASH3A-209ENST00000635325 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
UBASH3A-209ENST00000635325 KDM5CP41229 1560 aa17.29■□□□□ 0.36
UBASH3A-209ENST00000635325 POLR1AO95602 1720 aaPredicted RBP17.29■□□□□ 0.36
UBASH3A-209ENST00000635325 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
UBASH3A-209ENST00000635325 BCORL1Q5H9F3 1711 aa17.28■□□□□ 0.36
UBASH3A-209ENST00000635325 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
UBASH3A-209ENST00000635325 CCDC184Q52MB2 194 aa17.27■□□□□ 0.35
UBASH3A-209ENST00000635325 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
UBASH3A-209ENST00000635325 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
UBASH3A-209ENST00000635325 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
UBASH3A-209ENST00000635325 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
UBASH3A-209ENST00000635325 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
UBASH3A-209ENST00000635325 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 AFAP1Q8N556 730 aa17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 CARD11Q9BXL7 1154 aa17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 POGZQ7Z3K3 1410 aa17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 ZNF518AQ6AHZ1 1483 aa17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
UBASH3A-209ENST00000635325 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
UBASH3A-209ENST00000635325 PPRC1Q5VV67 1664 aaKnown RBP17.21■□□□□ 0.35
UBASH3A-209ENST00000635325 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
UBASH3A-209ENST00000635325 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
UBASH3A-209ENST00000635325 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
UBASH3A-209ENST00000635325 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBASH3A-209ENST00000635325 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
UBASH3A-209ENST00000635325 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
UBASH3A-209ENST00000635325 A2MP01023 1474 aa17.19■□□□□ 0.34
UBASH3A-209ENST00000635325 ST20-MTHFSA0A0A6YYL1 179 aa17.18■□□□□ 0.34
UBASH3A-209ENST00000635325 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
UBASH3A-209ENST00000635325 ATP10AO60312 1499 aa17.17■□□□□ 0.34
UBASH3A-209ENST00000635325 MLH3Q9UHC1 1453 aa17.17■□□□□ 0.34
UBASH3A-209ENST00000635325 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
UBASH3A-209ENST00000635325 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
UBASH3A-209ENST00000635325 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
UBASH3A-209ENST00000635325 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
UBASH3A-209ENST00000635325 TRPM1Q7Z4N2 1603 aa17.15■□□□□ 0.34
UBASH3A-209ENST00000635325 FKBP8Q14318 412 aa17.14■□□□□ 0.33
UBASH3A-209ENST00000635325 RICTORQ6R327 1708 aa17.14■□□□□ 0.33
UBASH3A-209ENST00000635325 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
UBASH3A-209ENST00000635325 NBPF1Q3BBV0 1214 aa17.14■□□□□ 0.33
UBASH3A-209ENST00000635325 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
UBASH3A-209ENST00000635325 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
UBASH3A-209ENST00000635325 FRMPD1Q5SYB0 1578 aa17.12■□□□□ 0.33
UBASH3A-209ENST00000635325 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
UBASH3A-209ENST00000635325 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
UBASH3A-209ENST00000635325 E9PCH4 1651 aa17.1■□□□□ 0.33
UBASH3A-209ENST00000635325 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
UBASH3A-209ENST00000635325 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
UBASH3A-209ENST00000635325 BCANQ96GW7 911 aa17.1■□□□□ 0.33
UBASH3A-209ENST00000635325 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
UBASH3A-209ENST00000635325 DEPDC5O75140 1603 aa17.09■□□□□ 0.33
UBASH3A-209ENST00000635325 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
UBASH3A-209ENST00000635325 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
UBASH3A-209ENST00000635325 TRPM2O94759 1503 aa17.06■□□□□ 0.32
UBASH3A-209ENST00000635325 KIF3BO15066 747 aa17.05■□□□□ 0.32
UBASH3A-209ENST00000635325 NEFLP07196 543 aa17.05■□□□□ 0.32
UBASH3A-209ENST00000635325 PRDM15P57071 1507 aaPredicted RBP17.05■□□□□ 0.32
UBASH3A-209ENST00000635325 PTPRTO14522 1441 aa17.04■□□□□ 0.32
UBASH3A-209ENST00000635325 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
UBASH3A-209ENST00000635325 LAMC1P11047 1609 aa17.04■□□□□ 0.32
UBASH3A-209ENST00000635325 TET3O43151 1660 aa17.03■□□□□ 0.32
UBASH3A-209ENST00000635325 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.32
UBASH3A-209ENST00000635325 TESK2Q96S53 571 aa17.02■□□□□ 0.32
UBASH3A-209ENST00000635325 CLTCL1P53675 1640 aa17.02■□□□□ 0.31
UBASH3A-209ENST00000635325 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.31
UBASH3A-209ENST00000635325 YEATS2Q9ULM3 1422 aa17.02■□□□□ 0.31
UBASH3A-209ENST00000635325 KANK1Q14678 1352 aa17.01■□□□□ 0.31
UBASH3A-209ENST00000635325 COL17A1Q9UMD9 1497 aaPredicted RBP17.01■□□□□ 0.31
UBASH3A-209ENST00000635325 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
UBASH3A-209ENST00000635325 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
UBASH3A-209ENST00000635325 DISP3Q9P2K9 1392 aa17■□□□□ 0.31
UBASH3A-209ENST00000635325 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
UBASH3A-209ENST00000635325 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
UBASH3A-209ENST00000635325 CEP152O94986 1710 aa16.98■□□□□ 0.31
UBASH3A-209ENST00000635325 REREQ9P2R6 1566 aa16.97■□□□□ 0.31
UBASH3A-209ENST00000635325 UGGT1Q9NYU2 1555 aa16.95■□□□□ 0.3
UBASH3A-209ENST00000635325 ARHGEF40Q8TER5 1519 aa16.95■□□□□ 0.3
UBASH3A-209ENST00000635325 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
UBASH3A-209ENST00000635325 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
UBASH3A-209ENST00000635325 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
UBASH3A-209ENST00000635325 TMC1Q8TDI8 760 aa16.93■□□□□ 0.3
UBASH3A-209ENST00000635325 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
UBASH3A-209ENST00000635325 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
UBASH3A-209ENST00000635325 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
UBASH3A-209ENST00000635325 RALBP1Q15311 655 aa16.92■□□□□ 0.3
UBASH3A-209ENST00000635325 KTN1Q86UP2 1357 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms