RNA–Protein interactions for RNA: ENST00000634931.1

SMARCA2-231, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5 BASIC

Gene SMARCA2, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-231	ENST00000634931	EN1	Q05925	392 aa	Predicted RBP	10.92	□□□□□ -0.66
SMARCA2-231	ENST00000634931	RBM33	Q96EV2	1170 aa	Known RBP	10.92	□□□□□ -0.66
SMARCA2-231	ENST00000634931	DDRGK1	Q96HY6	314 aa		10.92	□□□□□ -0.66
SMARCA2-231	ENST00000634931	EPAS1	Q99814	870 aa		10.92	□□□□□ -0.66
SMARCA2-231	ENST00000634931	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.92	□□□□□ -0.66
SMARCA2-231	ENST00000634931	PLEKHG3	A1L390	1219 aa		10.91	□□□□□ -0.66
SMARCA2-231	ENST00000634931	PCDHGA4	Q9Y5G9	962 aa		10.9	□□□□□ -0.66
SMARCA2-231	ENST00000634931	CDAN1	Q8IWY9	1227 aa		10.89	□□□□□ -0.67
SMARCA2-231	ENST00000634931	SUPT5H	O00267	1087 aa	Known RBP	10.88	□□□□□ -0.67
SMARCA2-231	ENST00000634931	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.88	□□□□□ -0.67
SMARCA2-231	ENST00000634931	PCDHGA10	Q9Y5H3	936 aa		10.88	□□□□□ -0.67
SMARCA2-231	ENST00000634931	ABCC9	O60706	1549 aa		10.86	□□□□□ -0.67
SMARCA2-231	ENST00000634931	TYW1B	Q6NUM6	668 aa		10.86	□□□□□ -0.67
SMARCA2-231	ENST00000634931	SLAIN1	Q8ND83	568 aa		10.86	□□□□□ -0.67
SMARCA2-231	ENST00000634931	TSR1	Q2NL82	804 aa	Known RBP	10.85	□□□□□ -0.67
SMARCA2-231	ENST00000634931	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.85	□□□□□ -0.67
SMARCA2-231	ENST00000634931	ARX	Q96QS3	562 aa		10.85	□□□□□ -0.67
SMARCA2-231	ENST00000634931	FBXW7	Q969H0	707 aa		10.82	□□□□□ -0.68
SMARCA2-231	ENST00000634931	JPH4	Q96JJ6	628 aa		10.82	□□□□□ -0.68
SMARCA2-231	ENST00000634931	MS4A1	P11836	297 aa		10.81	□□□□□ -0.68
SMARCA2-231	ENST00000634931	REPIN1	Q9BWE0	567 aa	Known RBP	10.81	□□□□□ -0.68
SMARCA2-231	ENST00000634931	KDM4F	A0A1W2PPD8	638 aa		10.79	□□□□□ -0.68
SMARCA2-231	ENST00000634931	CLCN1	P35523	988 aa		10.79	□□□□□ -0.68
SMARCA2-231	ENST00000634931	MDM2	Q00987	491 aa	Predicted RBP	10.79	□□□□□ -0.68
SMARCA2-231	ENST00000634931	FOSB	P53539	338 aa		10.78	□□□□□ -0.68
SMARCA2-231	ENST00000634931	PHOX2B	Q99453	314 aa		10.77	□□□□□ -0.69
SMARCA2-231	ENST00000634931	TMUB1	Q9BVT8	246 aa		10.77	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ZMYND15	Q9H091	742 aa		10.77	□□□□□ -0.69
SMARCA2-231	ENST00000634931	GPCPD1	Q9NPB8	672 aa		10.77	□□□□□ -0.69
SMARCA2-231	ENST00000634931	FAM161A	Q3B820	660 aa		10.76	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ZNF454	Q8N9F8	522 aa		10.76	□□□□□ -0.69
SMARCA2-231	ENST00000634931	GOPC	Q9HD26	462 aa		10.76	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ST18	O60284	1047 aa		10.75	□□□□□ -0.69
SMARCA2-231	ENST00000634931	C6orf132	Q5T0Z8	1188 aa		10.75	□□□□□ -0.69
SMARCA2-231	ENST00000634931	PADI6	Q6TGC4	694 aa		10.75	□□□□□ -0.69
SMARCA2-231	ENST00000634931	NUDT7	P0C024	238 aa		10.74	□□□□□ -0.69
SMARCA2-231	ENST00000634931	HOMEZ	Q8IX15	550 aa		10.74	□□□□□ -0.69
SMARCA2-231	ENST00000634931	CERK	Q8TCT0	537 aa		10.74	□□□□□ -0.69
SMARCA2-231	ENST00000634931	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ZDHHC16	Q969W1	377 aa		10.74	□□□□□ -0.69
SMARCA2-231	ENST00000634931	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.74	□□□□□ -0.69
SMARCA2-231	ENST00000634931	DOK7	Q18PE1	504 aa		10.73	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ARSI	Q5FYB1	569 aa		10.73	□□□□□ -0.69
SMARCA2-231	ENST00000634931	OAT	P04181	439 aa		10.72	□□□□□ -0.69
SMARCA2-231	ENST00000634931	SSTR3	P32745	418 aa	Predicted RBP	10.72	□□□□□ -0.69
SMARCA2-231	ENST00000634931	METTL3	Q86U44	580 aa	Known RBP	10.72	□□□□□ -0.69
SMARCA2-231	ENST00000634931	NLRP7	Q8WX94	980 aa		10.72	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ADAM33	Q9BZ11	813 aa		10.71	□□□□□ -0.69
SMARCA2-231	ENST00000634931	RSPH6A	Q9H0K4	717 aa		10.71	□□□□□ -0.69
SMARCA2-231	ENST00000634931	ADGRG1	Q9Y653	693 aa		10.71	□□□□□ -0.69
SMARCA2-231	ENST00000634931	HOXB3	P14651	431 aa	Predicted RBP	10.7	□□□□□ -0.7
SMARCA2-231	ENST00000634931	SH3D19	Q5HYK7	790 aa		10.7	□□□□□ -0.7
SMARCA2-231	ENST00000634931	RIMBP2	O15034	1052 aa		10.69	□□□□□ -0.7
SMARCA2-231	ENST00000634931	FLII	Q13045	1269 aa		10.69	□□□□□ -0.7
SMARCA2-231	ENST00000634931	PXYLP1	Q8TE99	480 aa		10.69	□□□□□ -0.7
SMARCA2-231	ENST00000634931	BEGAIN	Q9BUH8	593 aa		10.68	□□□□□ -0.7
SMARCA2-231	ENST00000634931	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.68	□□□□□ -0.7
SMARCA2-231	ENST00000634931	TTC13	Q8NBP0	860 aa		10.67	□□□□□ -0.7
SMARCA2-231	ENST00000634931	RBM27	Q9P2N5	1060 aa	Known RBP	10.67	□□□□□ -0.7
SMARCA2-231	ENST00000634931	PRSS12	P56730	875 aa		10.66	□□□□□ -0.7
SMARCA2-231	ENST00000634931	ZSWIM6	Q9HCJ5	1215 aa		10.66	□□□□□ -0.7
SMARCA2-231	ENST00000634931	GPR153	Q6NV75	609 aa		10.65	□□□□□ -0.7
SMARCA2-231	ENST00000634931	ZNF710	Q8N1W2	664 aa		10.65	□□□□□ -0.7
SMARCA2-231	ENST00000634931	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.65	□□□□□ -0.7
SMARCA2-231	ENST00000634931	CCDC180	Q9P1Z9	1646 aa		10.65	□□□□□ -0.7
SMARCA2-231	ENST00000634931	SNPH	O15079	494 aa		10.64	□□□□□ -0.71
SMARCA2-231	ENST00000634931	SKIV2L	Q15477	1246 aa	Known RBP	10.64	□□□□□ -0.71
SMARCA2-231	ENST00000634931	CDCA7L	Q96GN5	454 aa		10.64	□□□□□ -0.71
SMARCA2-231	ENST00000634931	MMRN1	Q13201	1228 aa		10.63	□□□□□ -0.71
SMARCA2-231	ENST00000634931	RBM46	Q8TBY0	533 aa	Known RBP	10.63	□□□□□ -0.71
SMARCA2-231	ENST00000634931	LHX6	Q9UPM6	363 aa		10.63	□□□□□ -0.71
SMARCA2-231	ENST00000634931	ONECUT3	O60422	494 aa	Predicted RBP	10.62	□□□□□ -0.71
SMARCA2-231	ENST00000634931	PPP4R3B	Q5MIZ7	849 aa		10.61	□□□□□ -0.71
SMARCA2-231	ENST00000634931	POLR3E	Q9NVU0	708 aa		10.61	□□□□□ -0.71
SMARCA2-231	ENST00000634931	COL9A1	P20849	921 aa		10.6	□□□□□ -0.71
SMARCA2-231	ENST00000634931	SPNS2	Q8IVW8	549 aa		10.6	□□□□□ -0.71
SMARCA2-231	ENST00000634931	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.6	□□□□□ -0.71
SMARCA2-231	ENST00000634931	FAM198A	Q9UFP1	575 aa		10.6	□□□□□ -0.71
SMARCA2-231	ENST00000634931	MYSM1	Q5VVJ2	828 aa		10.58	□□□□□ -0.72
SMARCA2-231	ENST00000634931	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.57	□□□□□ -0.72
SMARCA2-231	ENST00000634931	PSD	A5PKW4	1024 aa	Predicted RBP	10.57	□□□□□ -0.72
SMARCA2-231	ENST00000634931	MARVELD3	Q96A59	401 aa		10.57	□□□□□ -0.72
SMARCA2-231	ENST00000634931	BCL2L12	Q9HB09	334 aa		10.57	□□□□□ -0.72
SMARCA2-231	ENST00000634931	RCCD1	A6NED2	376 aa		10.56	□□□□□ -0.72
SMARCA2-231	ENST00000634931	TBC1D2	Q9BYX2	928 aa		10.56	□□□□□ -0.72
SMARCA2-231	ENST00000634931	UBTF	P17480	764 aa	Known RBP	10.55	□□□□□ -0.72
SMARCA2-231	ENST00000634931	PTPRE	P23469	700 aa		10.55	□□□□□ -0.72
SMARCA2-231	ENST00000634931	CLK2	P49760	499 aa	Known RBP	10.55	□□□□□ -0.72
SMARCA2-231	ENST00000634931	MCM6	Q14566	821 aa		10.55	□□□□□ -0.72
SMARCA2-231	ENST00000634931	TSKS	Q9UJT2	592 aa		10.55	□□□□□ -0.72
SMARCA2-231	ENST00000634931	PPP1R3G	B7ZBB8	358 aa		10.54	□□□□□ -0.72
SMARCA2-231	ENST00000634931	CLUAP1	Q96AJ1	413 aa		10.54	□□□□□ -0.72
SMARCA2-231	ENST00000634931	EYA1	Q99502	592 aa		10.54	□□□□□ -0.72
SMARCA2-231	ENST00000634931	ARID3C	A6NKF2	412 aa		10.53	□□□□□ -0.72
SMARCA2-231	ENST00000634931	NUDT18	Q6ZVK8	323 aa		10.53	□□□□□ -0.72
SMARCA2-231	ENST00000634931	ARID3A	Q99856	593 aa		10.53	□□□□□ -0.72
SMARCA2-231	ENST00000634931	C1orf115	Q9H7X2	142 aa		10.53	□□□□□ -0.72
SMARCA2-231	ENST00000634931		A6NJR5	290 aa		10.52	□□□□□ -0.73
SMARCA2-231	ENST00000634931	NBPF26	B4DH59	902 aa		10.52	□□□□□ -0.73
SMARCA2-231	ENST00000634931	DIXDC1	Q155Q3	683 aa		10.52	□□□□□ -0.73

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