RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
SNRNP48-203ENST00000634363 WASHC2CQ9Y4E1 1318 aa24.63■■□□□ 1.53
SNRNP48-203ENST00000634363 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
SNRNP48-203ENST00000634363 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
SNRNP48-203ENST00000634363 TCOF1Q13428 1488 aaKnown RBP24.62■■□□□ 1.53
SNRNP48-203ENST00000634363 A2ML1A8K2U0 1454 aa24.61■■□□□ 1.53
SNRNP48-203ENST00000634363 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
SNRNP48-203ENST00000634363 TNRQ92752 1358 aa24.59■■□□□ 1.53
SNRNP48-203ENST00000634363 KDM5DQ9BY66 1539 aa24.55■■□□□ 1.52
SNRNP48-203ENST00000634363 SPATA31D1Q6ZQQ2 1576 aa24.54■■□□□ 1.52
SNRNP48-203ENST00000634363 PZPP20742 1482 aa24.52■■□□□ 1.52
SNRNP48-203ENST00000634363 ARHGEF5Q12774 1597 aa24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 SOCS7O14512 581 aa24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 ANKLE2Q86XL3 938 aa24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 THEMISQ8N1K5 641 aaPredicted RBP24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 SCAF1Q9H7N4 1312 aaKnown RBP24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.51■■□□□ 1.51
SNRNP48-203ENST00000634363 LRRC9Q6ZRR7 1453 aa24.5■■□□□ 1.51
SNRNP48-203ENST00000634363 MIA2Q96PC5 1412 aa24.49■■□□□ 1.51
SNRNP48-203ENST00000634363 KANK4Q5T7N3 995 aaPredicted RBP24.48■■□□□ 1.51
SNRNP48-203ENST00000634363 VPS8Q8N3P4 1428 aa24.48■■□□□ 1.51
SNRNP48-203ENST00000634363 PIP4K2BP78356 416 aa24.47■■□□□ 1.51
SNRNP48-203ENST00000634363 FAM135AQ9P2D6 1515 aa24.46■■□□□ 1.51
SNRNP48-203ENST00000634363 NEURL4Q96JN8 1562 aa24.45■■□□□ 1.5
SNRNP48-203ENST00000634363 UGGT1Q9NYU2 1555 aa24.44■■□□□ 1.5
SNRNP48-203ENST00000634363 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
SNRNP48-203ENST00000634363 TOM1O60784 492 aa24.42■■□□□ 1.5
SNRNP48-203ENST00000634363 NLRP1Q9C000 1473 aa24.42■■□□□ 1.5
SNRNP48-203ENST00000634363 SHANK2Q9UPX8 1470 aa24.42■■□□□ 1.5
SNRNP48-203ENST00000634363 CPS1P31327 1500 aa24.39■■□□□ 1.49
SNRNP48-203ENST00000634363 MAST1Q9Y2H9 1570 aa24.38■■□□□ 1.49
SNRNP48-203ENST00000634363 RNF17Q9BXT8 1623 aaKnown RBP24.38■■□□□ 1.49
SNRNP48-203ENST00000634363 NPHP4O75161 1426 aaPredicted RBP24.37■■□□□ 1.49
SNRNP48-203ENST00000634363 ABCC3O15438 1527 aa24.37■■□□□ 1.49
SNRNP48-203ENST00000634363 HSPA1LP34931 641 aa24.37■■□□□ 1.49
SNRNP48-203ENST00000634363 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
SNRNP48-203ENST00000634363 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
SNRNP48-203ENST00000634363 CEP152O94986 1710 aa24.33■■□□□ 1.49
SNRNP48-203ENST00000634363 DEPDC5O75140 1603 aa24.33■■□□□ 1.49
SNRNP48-203ENST00000634363 EIF2AK4Q9P2K8 1649 aaKnown RBP24.33■■□□□ 1.49
SNRNP48-203ENST00000634363 APLP2Q06481 763 aa24.33■■□□□ 1.49
SNRNP48-203ENST00000634363 MAP3K1Q13233 1512 aa24.33■■□□□ 1.49
SNRNP48-203ENST00000634363 VWDEQ8N2E2 1590 aa24.33■■□□□ 1.48
SNRNP48-203ENST00000634363 MED14O60244 1454 aa24.32■■□□□ 1.48
SNRNP48-203ENST00000634363 RRP7BPQ9NSQ0 103 aa24.32■■□□□ 1.48
SNRNP48-203ENST00000634363 IQGAP1P46940 1657 aa24.31■■□□□ 1.48
SNRNP48-203ENST00000634363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.31■■□□□ 1.482e-6■□□□□ 11.2
SNRNP48-203ENST00000634363 ERVK-7P63135 1459 aa24.31■■□□□ 1.48
SNRNP48-203ENST00000634363 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
SNRNP48-203ENST00000634363 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
SNRNP48-203ENST00000634363 MROH1Q8NDA8 1641 aa24.28■■□□□ 1.48
SNRNP48-203ENST00000634363 KIF15Q9NS87 1388 aa24.26■■□□□ 1.47
SNRNP48-203ENST00000634363 TXNDC2Q86VQ3 553 aa24.24■■□□□ 1.47
SNRNP48-203ENST00000634363 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
SNRNP48-203ENST00000634363 STRCP1A6NGW2 1772 aa24.24■■□□□ 1.47
SNRNP48-203ENST00000634363 ABCC5O15440 1437 aa24.23■■□□□ 1.47
SNRNP48-203ENST00000634363 PTPN23Q9H3S7 1636 aa24.22■■□□□ 1.47
SNRNP48-203ENST00000634363 CHIC2Q9UKJ5 165 aa24.22■■□□□ 1.47
SNRNP48-203ENST00000634363 LTKP29376 864 aa24.21■■□□□ 1.47
SNRNP48-203ENST00000634363 STAG3Q9UJ98 1225 aa24.2■■□□□ 1.46
SNRNP48-203ENST00000634363 CROCC2H7BZ55 1655 aa24.2■■□□□ 1.46
SNRNP48-203ENST00000634363 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.46
SNRNP48-203ENST00000634363 EID1Q9Y6B2 187 aa24.19■■□□□ 1.46
SNRNP48-203ENST00000634363 MED1Q15648 1581 aaPredicted RBP24.19■■□□□ 1.46
SNRNP48-203ENST00000634363 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
SNRNP48-203ENST00000634363 ERBINQ96RT1 1412 aa24.18■■□□□ 1.46
SNRNP48-203ENST00000634363 KANK1Q14678 1352 aa24.17■■□□□ 1.46
SNRNP48-203ENST00000634363 DAPK1P53355 1430 aa24.17■■□□□ 1.46
SNRNP48-203ENST00000634363 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
SNRNP48-203ENST00000634363 PRDM15P57071 1507 aaPredicted RBP24.15■■□□□ 1.46
SNRNP48-203ENST00000634363 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
SNRNP48-203ENST00000634363 ARHGAP31Q2M1Z3 1444 aa24.15■■□□□ 1.46
SNRNP48-203ENST00000634363 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
SNRNP48-203ENST00000634363 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
SNRNP48-203ENST00000634363 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
SNRNP48-203ENST00000634363 ARHGAP23Q9P227 1491 aa24.12■■□□□ 1.45
SNRNP48-203ENST00000634363 SYNMO15061 1565 aa24.12■■□□□ 1.45
SNRNP48-203ENST00000634363 SLIT1O75093 1534 aa24.11■■□□□ 1.45
SNRNP48-203ENST00000634363 IDI1Q13907 227 aa24.1■■□□□ 1.45
SNRNP48-203ENST00000634363 TMEM2Q9UHN6 1383 aa24.07■■□□□ 1.44
SNRNP48-203ENST00000634363 FAM50AQ14320 339 aaKnown RBP24.07■■□□□ 1.44
SNRNP48-203ENST00000634363 BCANQ96GW7 911 aa24.04■■□□□ 1.44
SNRNP48-203ENST00000634363 SLC26A8Q96RN1 970 aa24.04■■□□□ 1.44
SNRNP48-203ENST00000634363 XIRP1Q702N8 1843 aaKnown RBP24.04■■□□□ 1.44
SNRNP48-203ENST00000634363 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
SNRNP48-203ENST00000634363 PROSER2Q86WR7 435 aaPredicted RBP24■■□□□ 1.43
SNRNP48-203ENST00000634363 RBM33Q96EV2 1170 aaKnown RBP24■■□□□ 1.43
SNRNP48-203ENST00000634363 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
SNRNP48-203ENST00000634363 KCNA6P17658 529 aa23.98■■□□□ 1.43
SNRNP48-203ENST00000634363 KDM5AP29375 1690 aaKnown RBP23.98■■□□□ 1.43
SNRNP48-203ENST00000634363 TMEM94Q12767 1356 aa23.96■■□□□ 1.43
SNRNP48-203ENST00000634363 SLC52A1Q9NWF4 448 aa23.96■■□□□ 1.43
SNRNP48-203ENST00000634363 NOS1P29475 1434 aa23.94■■□□□ 1.42
SNRNP48-203ENST00000634363 TET3O43151 1660 aa23.92■■□□□ 1.42
SNRNP48-203ENST00000634363 ADGRL2O95490 1459 aa23.92■■□□□ 1.42
SNRNP48-203ENST00000634363 ANKRD50Q9ULJ7 1429 aa23.92■■□□□ 1.42
SNRNP48-203ENST00000634363 ADGRB3O60242 1522 aa23.91■■□□□ 1.42
SNRNP48-203ENST00000634363 FAM135BQ49AJ0 1406 aa23.9■■□□□ 1.42
SNRNP48-203ENST00000634363 PPP1R15AO75807 674 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms