RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC9-216ENST00000634178 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
TRAPPC9-216ENST00000634178 ARSIQ5FYB1 569 aa9.69□□□□□ -0.86
TRAPPC9-216ENST00000634178 IL27Q8NEV9 243 aa9.69□□□□□ -0.86
TRAPPC9-216ENST00000634178 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAPPC9-216ENST00000634178 FCHSD2O94868 740 aa9.68□□□□□ -0.86
TRAPPC9-216ENST00000634178 HIC1Q14526 733 aa9.68□□□□□ -0.86
TRAPPC9-216ENST00000634178 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
TRAPPC9-216ENST00000634178 GPR37O15354 613 aa9.67□□□□□ -0.86
TRAPPC9-216ENST00000634178 UPF1Q92900 1129 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAPPC9-216ENST00000634178 GNPATO15228 680 aa9.66□□□□□ -0.86
TRAPPC9-216ENST00000634178 NISCHQ9Y2I1 1504 aa9.66□□□□□ -0.86
TRAPPC9-216ENST00000634178 IRF6O14896 467 aa9.65□□□□□ -0.86
TRAPPC9-216ENST00000634178 OSBPP22059 807 aa9.65□□□□□ -0.86
TRAPPC9-216ENST00000634178 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.86
TRAPPC9-216ENST00000634178 EVI5O60447 810 aa9.63□□□□□ -0.87
TRAPPC9-216ENST00000634178 AMHR2Q16671 573 aa9.63□□□□□ -0.87
TRAPPC9-216ENST00000634178 HOMEZQ8IX15 550 aa9.63□□□□□ -0.87
TRAPPC9-216ENST00000634178 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
TRAPPC9-216ENST00000634178 LSM11P83369 360 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAPPC9-216ENST00000634178 DDX12PQ92771 950 aa9.62□□□□□ -0.87
TRAPPC9-216ENST00000634178 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
TRAPPC9-216ENST00000634178 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
TRAPPC9-216ENST00000634178 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-216ENST00000634178 SLC34A2O95436 690 aa9.57□□□□□ -0.88
TRAPPC9-216ENST00000634178 EPAS1Q99814 870 aa9.57□□□□□ -0.88
TRAPPC9-216ENST00000634178 FAM117AQ9C073 453 aa9.57□□□□□ -0.88
TRAPPC9-216ENST00000634178 PTGDRQ13258 359 aa9.56□□□□□ -0.88
TRAPPC9-216ENST00000634178 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC9-216ENST00000634178 NUDT7P0C024 238 aa9.55□□□□□ -0.88
TRAPPC9-216ENST00000634178 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC9-216ENST00000634178 PARP9Q8IXQ6 854 aa9.54□□□□□ -0.88
TRAPPC9-216ENST00000634178 ZMYND15Q9H091 742 aa9.54□□□□□ -0.88
TRAPPC9-216ENST00000634178 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
TRAPPC9-216ENST00000634178 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
TRAPPC9-216ENST00000634178 PHF14O94880 888 aa9.53□□□□□ -0.88
TRAPPC9-216ENST00000634178 PBX2P40425 430 aa9.53□□□□□ -0.88
TRAPPC9-216ENST00000634178 LHX6Q9UPM6 363 aa9.52□□□□□ -0.89
TRAPPC9-216ENST00000634178 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
TRAPPC9-216ENST00000634178 FECHP22830 423 aa9.51□□□□□ -0.89
TRAPPC9-216ENST00000634178 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
TRAPPC9-216ENST00000634178 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC9-216ENST00000634178 FLIIQ13045 1269 aa9.5□□□□□ -0.89
TRAPPC9-216ENST00000634178 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
TRAPPC9-216ENST00000634178 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
TRAPPC9-216ENST00000634178 MAP3K7O43318 606 aa9.49□□□□□ -0.89
TRAPPC9-216ENST00000634178 FBXW7Q969H0 707 aa9.49□□□□□ -0.89
TRAPPC9-216ENST00000634178 CLCN1P35523 988 aa9.48□□□□□ -0.89
TRAPPC9-216ENST00000634178 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-216ENST00000634178 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
TRAPPC9-216ENST00000634178 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
TRAPPC9-216ENST00000634178 CERKQ8TCT0 537 aa9.46□□□□□ -0.9
TRAPPC9-216ENST00000634178 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC9-216ENST00000634178 KDM4FA0A1W2PPD8 638 aa9.45□□□□□ -0.9
TRAPPC9-216ENST00000634178 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
TRAPPC9-216ENST00000634178 OATP04181 439 aa9.43□□□□□ -0.9
TRAPPC9-216ENST00000634178 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
TRAPPC9-216ENST00000634178 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-216ENST00000634178 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
TRAPPC9-216ENST00000634178 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-216ENST00000634178 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
TRAPPC9-216ENST00000634178 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
TRAPPC9-216ENST00000634178 CDHR5Q9HBB8 845 aa9.41□□□□□ -0.9
TRAPPC9-216ENST00000634178 HCSTQ9UBK5 93 aa9.41□□□□□ -0.9
TRAPPC9-216ENST00000634178 MS4A1P11836 297 aa9.4□□□□□ -0.9
TRAPPC9-216ENST00000634178 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
TRAPPC9-216ENST00000634178 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
TRAPPC9-216ENST00000634178 HRO43593 1189 aa9.39□□□□□ -0.91
TRAPPC9-216ENST00000634178 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-216ENST00000634178 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
TRAPPC9-216ENST00000634178 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-216ENST00000634178 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
TRAPPC9-216ENST00000634178 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-216ENST00000634178 SKIV2LQ15477 1246 aaKnown RBP9.36□□□□□ -0.91
TRAPPC9-216ENST00000634178 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
TRAPPC9-216ENST00000634178 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
TRAPPC9-216ENST00000634178 TK2O00142 265 aa9.35□□□□□ -0.91
TRAPPC9-216ENST00000634178 PSEN2P49810 448 aa9.35□□□□□ -0.91
TRAPPC9-216ENST00000634178 FOSBP53539 338 aa9.35□□□□□ -0.91
TRAPPC9-216ENST00000634178 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
TRAPPC9-216ENST00000634178 PSDA5PKW4 1024 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-216ENST00000634178 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
TRAPPC9-216ENST00000634178 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
TRAPPC9-216ENST00000634178 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-216ENST00000634178 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-216ENST00000634178 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
TRAPPC9-216ENST00000634178 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
TRAPPC9-216ENST00000634178 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-216ENST00000634178 FAM217BQ9NTX9 383 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-216ENST00000634178 A6NJR5 290 aa9.31□□□□□ -0.92
TRAPPC9-216ENST00000634178 PADI6Q6TGC4 694 aa9.31□□□□□ -0.92
TRAPPC9-216ENST00000634178 PXYLP1Q8TE99 480 aa9.31□□□□□ -0.92
TRAPPC9-216ENST00000634178 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
TRAPPC9-216ENST00000634178 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
TRAPPC9-216ENST00000634178 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
TRAPPC9-216ENST00000634178 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC9-216ENST00000634178 PRSS12P56730 875 aa9.28□□□□□ -0.92
TRAPPC9-216ENST00000634178 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
TRAPPC9-216ENST00000634178 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
TRAPPC9-216ENST00000634178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms