RNA–Protein interactions for RNA: ENST00000633179.1

LINC01002-223, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-223ENST00000633179 DHX29Q7Z478 1369 aaKnown RBP19.35■□□□□ 0.69
LINC01002-223ENST00000633179 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
LINC01002-223ENST00000633179 ZNF644Q9H582 1327 aaPredicted RBP19.35■□□□□ 0.69
LINC01002-223ENST00000633179 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
LINC01002-223ENST00000633179 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
LINC01002-223ENST00000633179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.33■□□□□ 0.69
LINC01002-223ENST00000633179 VWDEQ8N2E2 1590 aa19.33■□□□□ 0.69
LINC01002-223ENST00000633179 THEMISQ8N1K5 641 aaPredicted RBP19.33■□□□□ 0.68
LINC01002-223ENST00000633179 RTEL1-TNFRSF6BF6WH68 1400 aa19.33■□□□□ 0.68
LINC01002-223ENST00000633179 ADGBQ8N7X0 1667 aa19.31■□□□□ 0.68
LINC01002-223ENST00000633179 MED14O60244 1454 aa19.31■□□□□ 0.68
LINC01002-223ENST00000633179 PZPP20742 1482 aa19.3■□□□□ 0.68
LINC01002-223ENST00000633179 KIF3BO15066 747 aa19.3■□□□□ 0.68
LINC01002-223ENST00000633179 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
LINC01002-223ENST00000633179 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
LINC01002-223ENST00000633179 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
LINC01002-223ENST00000633179 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
LINC01002-223ENST00000633179 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.68
LINC01002-223ENST00000633179 RGS17Q9UGC6 210 aaPredicted RBP19.27■□□□□ 0.68
LINC01002-223ENST00000633179 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
LINC01002-223ENST00000633179 MTUS2Q5JR59 1369 aa19.25■□□□□ 0.67
LINC01002-223ENST00000633179 DEPDC5O75140 1603 aa19.24■□□□□ 0.67
LINC01002-223ENST00000633179 LRRC7Q96NW7 1537 aa19.24■□□□□ 0.67
LINC01002-223ENST00000633179 KDM5DQ9BY66 1539 aa19.24■□□□□ 0.67
LINC01002-223ENST00000633179 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
LINC01002-223ENST00000633179 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
LINC01002-223ENST00000633179 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
LINC01002-223ENST00000633179 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
LINC01002-223ENST00000633179 RSPH4AQ5TD94 716 aa19.19■□□□□ 0.66
LINC01002-223ENST00000633179 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
LINC01002-223ENST00000633179 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
LINC01002-223ENST00000633179 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
LINC01002-223ENST00000633179 CCDC141Q6ZP82 1450 aa19.16■□□□□ 0.66
LINC01002-223ENST00000633179 RNF17Q9BXT8 1623 aaKnown RBP19.13■□□□□ 0.65
LINC01002-223ENST00000633179 SYNMO15061 1565 aa19.1■□□□□ 0.65
LINC01002-223ENST00000633179 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
LINC01002-223ENST00000633179 POTEAQ6S8J7 498 aa19.1■□□□□ 0.65
LINC01002-223ENST00000633179 TSPY4P0CV99 314 aa19.09■□□□□ 0.65
LINC01002-223ENST00000633179 TSPY10P0CW01 314 aa19.09■□□□□ 0.65
LINC01002-223ENST00000633179 LTKP29376 864 aa19.09■□□□□ 0.65
LINC01002-223ENST00000633179 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
LINC01002-223ENST00000633179 FAM135BQ49AJ0 1406 aa19.08■□□□□ 0.64
LINC01002-223ENST00000633179 ABCC3O15438 1527 aa19.07■□□□□ 0.64
LINC01002-223ENST00000633179 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
LINC01002-223ENST00000633179 ZC3H13Q5T200 1668 aaKnown RBP19.07■□□□□ 0.64
LINC01002-223ENST00000633179 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
LINC01002-223ENST00000633179 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
LINC01002-223ENST00000633179 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
LINC01002-223ENST00000633179 ARHGAP23Q9P227 1491 aa19.03■□□□□ 0.64
LINC01002-223ENST00000633179 ARHGEF5Q12774 1597 aa19.03■□□□□ 0.64
LINC01002-223ENST00000633179 SLIT1O75093 1534 aa19.01■□□□□ 0.63
LINC01002-223ENST00000633179 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
LINC01002-223ENST00000633179 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
LINC01002-223ENST00000633179 EID1Q9Y6B2 187 aa18.98■□□□□ 0.63
LINC01002-223ENST00000633179 MROH1Q8NDA8 1641 aa18.97■□□□□ 0.63
LINC01002-223ENST00000633179 TMEM94Q12767 1356 aa18.96■□□□□ 0.63
LINC01002-223ENST00000633179 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
LINC01002-223ENST00000633179 KCNA6P17658 529 aa18.95■□□□□ 0.62
LINC01002-223ENST00000633179 TMEM2Q9UHN6 1383 aa18.94■□□□□ 0.62
LINC01002-223ENST00000633179 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
LINC01002-223ENST00000633179 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
LINC01002-223ENST00000633179 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
LINC01002-223ENST00000633179 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
LINC01002-223ENST00000633179 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
LINC01002-223ENST00000633179 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
LINC01002-223ENST00000633179 ROBO1Q9Y6N7 1651 aa18.88■□□□□ 0.61
LINC01002-223ENST00000633179 CEP152O94986 1710 aa18.88■□□□□ 0.61
LINC01002-223ENST00000633179 TET3O43151 1660 aa18.87■□□□□ 0.61
LINC01002-223ENST00000633179 IDI1Q13907 227 aa18.87■□□□□ 0.61
LINC01002-223ENST00000633179 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
LINC01002-223ENST00000633179 SLAIN2Q9P270 581 aa18.87■□□□□ 0.61
LINC01002-223ENST00000633179 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
LINC01002-223ENST00000633179 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
LINC01002-223ENST00000633179 JCADQ9P266 1359 aa18.85■□□□□ 0.61
LINC01002-223ENST00000633179 STAG3Q9UJ98 1225 aa18.85■□□□□ 0.61
LINC01002-223ENST00000633179 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
LINC01002-223ENST00000633179 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
LINC01002-223ENST00000633179 UPF1Q92900 1129 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC01002-223ENST00000633179 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
LINC01002-223ENST00000633179 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
LINC01002-223ENST00000633179 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
LINC01002-223ENST00000633179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC01002-223ENST00000633179 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
LINC01002-223ENST00000633179 MSH6P52701 1360 aa18.81■□□□□ 0.6
LINC01002-223ENST00000633179 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
LINC01002-223ENST00000633179 NKTRP30414 1462 aaKnown RBP18.8■□□□□ 0.6
LINC01002-223ENST00000633179 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
LINC01002-223ENST00000633179 ERBINQ96RT1 1412 aa18.8■□□□□ 0.6
LINC01002-223ENST00000633179 KDM5AP29375 1690 aaKnown RBP18.79■□□□□ 0.6
LINC01002-223ENST00000633179 NWD1Q149M9 1564 aa18.77■□□□□ 0.6
LINC01002-223ENST00000633179 SPATA31A6Q5VVP1 1343 aa18.76■□□□□ 0.59
LINC01002-223ENST00000633179 ABCC5O15440 1437 aa18.76■□□□□ 0.59
LINC01002-223ENST00000633179 ZNF772Q68DY9 489 aaPredicted RBP18.76■□□□□ 0.59
LINC01002-223ENST00000633179 NOS1P29475 1434 aa18.75■□□□□ 0.59
LINC01002-223ENST00000633179 PHLPP1O60346 1717 aa18.75■□□□□ 0.59
LINC01002-223ENST00000633179 KANK1Q14678 1352 aa18.75■□□□□ 0.59
LINC01002-223ENST00000633179 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
LINC01002-223ENST00000633179 LRP6O75581 1613 aa18.74■□□□□ 0.59
LINC01002-223ENST00000633179 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
LINC01002-223ENST00000633179 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms