RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
PHACTR4-206ENST00000632421 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
PHACTR4-206ENST00000632421 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
PHACTR4-206ENST00000632421 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
PHACTR4-206ENST00000632421 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
PHACTR4-206ENST00000632421 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
PHACTR4-206ENST00000632421 ABCA9Q8IUA7 1624 aa16.91■□□□□ 0.3
PHACTR4-206ENST00000632421 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
PHACTR4-206ENST00000632421 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
PHACTR4-206ENST00000632421 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
PHACTR4-206ENST00000632421 FANCAO15360 1455 aa16.89■□□□□ 0.29
PHACTR4-206ENST00000632421 AFAP1Q8N556 730 aa16.89■□□□□ 0.29
PHACTR4-206ENST00000632421 ATP10AO60312 1499 aa16.89■□□□□ 0.29
PHACTR4-206ENST00000632421 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
PHACTR4-206ENST00000632421 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
PHACTR4-206ENST00000632421 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
PHACTR4-206ENST00000632421 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
PHACTR4-206ENST00000632421 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
PHACTR4-206ENST00000632421 A2MP01023 1474 aa16.85■□□□□ 0.29
PHACTR4-206ENST00000632421 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
PHACTR4-206ENST00000632421 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
PHACTR4-206ENST00000632421 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
PHACTR4-206ENST00000632421 INO80Q9ULG1 1556 aaPredicted RBP16.84■□□□□ 0.29
PHACTR4-206ENST00000632421 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
PHACTR4-206ENST00000632421 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
PHACTR4-206ENST00000632421 DHX29Q7Z478 1369 aaKnown RBP16.83■□□□□ 0.29
PHACTR4-206ENST00000632421 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
PHACTR4-206ENST00000632421 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
PHACTR4-206ENST00000632421 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
PHACTR4-206ENST00000632421 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
PHACTR4-206ENST00000632421 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
PHACTR4-206ENST00000632421 E9PCH4 1651 aa16.81■□□□□ 0.28
PHACTR4-206ENST00000632421 EIF2AK4Q9P2K8 1649 aaKnown RBP16.8■□□□□ 0.28
PHACTR4-206ENST00000632421 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
PHACTR4-206ENST00000632421 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
PHACTR4-206ENST00000632421 LAMC1P11047 1609 aa16.79■□□□□ 0.28
PHACTR4-206ENST00000632421 NEFLP07196 543 aa16.77■□□□□ 0.28
PHACTR4-206ENST00000632421 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
PHACTR4-206ENST00000632421 MYT1LQ9UL68 1186 aa16.77■□□□□ 0.28
PHACTR4-206ENST00000632421 TRPM2O94759 1503 aa16.77■□□□□ 0.28
PHACTR4-206ENST00000632421 TET3O43151 1660 aa16.77■□□□□ 0.28
PHACTR4-206ENST00000632421 FKBP8Q14318 412 aa16.77■□□□□ 0.28
PHACTR4-206ENST00000632421 KANK1Q14678 1352 aa16.77■□□□□ 0.27
PHACTR4-206ENST00000632421 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
PHACTR4-206ENST00000632421 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
PHACTR4-206ENST00000632421 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
PHACTR4-206ENST00000632421 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
PHACTR4-206ENST00000632421 PRDM15P57071 1507 aaPredicted RBP16.75■□□□□ 0.27
PHACTR4-206ENST00000632421 PTPRTO14522 1441 aa16.75■□□□□ 0.27
PHACTR4-206ENST00000632421 KIF3BO15066 747 aa16.74■□□□□ 0.27
PHACTR4-206ENST00000632421 CEP152O94986 1710 aa16.73■□□□□ 0.27
PHACTR4-206ENST00000632421 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
PHACTR4-206ENST00000632421 CFAP74Q9C0B2 1584 aa16.73■□□□□ 0.27
PHACTR4-206ENST00000632421 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
PHACTR4-206ENST00000632421 CLTCL1P53675 1640 aa16.71■□□□□ 0.27
PHACTR4-206ENST00000632421 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
PHACTR4-206ENST00000632421 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
PHACTR4-206ENST00000632421 MROH1Q8NDA8 1641 aa16.71■□□□□ 0.26
PHACTR4-206ENST00000632421 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.26
PHACTR4-206ENST00000632421 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
PHACTR4-206ENST00000632421 MADDQ8WXG6 1647 aa16.69■□□□□ 0.26
PHACTR4-206ENST00000632421 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
PHACTR4-206ENST00000632421 BCANQ96GW7 911 aa16.68■□□□□ 0.26
PHACTR4-206ENST00000632421 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
PHACTR4-206ENST00000632421 ANP32EQ9BTT0 268 aa16.68■□□□□ 0.26
PHACTR4-206ENST00000632421 STAC3Q96MF2 364 aa16.68■□□□□ 0.26
PHACTR4-206ENST00000632421 KTN1Q86UP2 1357 aaKnown RBP16.67■□□□□ 0.26
PHACTR4-206ENST00000632421 POGZQ7Z3K3 1410 aa16.66■□□□□ 0.26
PHACTR4-206ENST00000632421 TESK2Q96S53 571 aa16.66■□□□□ 0.26
PHACTR4-206ENST00000632421 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
PHACTR4-206ENST00000632421 RALBP1Q15311 655 aa16.64■□□□□ 0.26
PHACTR4-206ENST00000632421 NEURL4Q96JN8 1562 aa16.64■□□□□ 0.25
PHACTR4-206ENST00000632421 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
PHACTR4-206ENST00000632421 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
PHACTR4-206ENST00000632421 TMF1P82094 1093 aa16.63■□□□□ 0.25
PHACTR4-206ENST00000632421 HECW2Q9P2P5 1572 aa16.62■□□□□ 0.25
PHACTR4-206ENST00000632421 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-206ENST00000632421 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
PHACTR4-206ENST00000632421 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
PHACTR4-206ENST00000632421 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
PHACTR4-206ENST00000632421 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-206ENST00000632421 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
PHACTR4-206ENST00000632421 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
PHACTR4-206ENST00000632421 NEO1Q92859 1461 aa16.6■□□□□ 0.25
PHACTR4-206ENST00000632421 KIF1BO60333 1816 aa16.59■□□□□ 0.25
PHACTR4-206ENST00000632421 UGGT1Q9NYU2 1555 aa16.59■□□□□ 0.25
PHACTR4-206ENST00000632421 FRMPD1Q5SYB0 1578 aa16.59■□□□□ 0.25
PHACTR4-206ENST00000632421 SCAF11Q99590 1463 aaKnown RBP16.58■□□□□ 0.25
PHACTR4-206ENST00000632421 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.24
PHACTR4-206ENST00000632421 PARD3Q8TEW0 1356 aa16.58■□□□□ 0.24
PHACTR4-206ENST00000632421 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
PHACTR4-206ENST00000632421 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
PHACTR4-206ENST00000632421 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
PHACTR4-206ENST00000632421 MYOM2P54296 1465 aa16.56■□□□□ 0.24
PHACTR4-206ENST00000632421 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
PHACTR4-206ENST00000632421 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
PHACTR4-206ENST00000632421 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
PHACTR4-206ENST00000632421 PANK3Q9H999 370 aa16.54■□□□□ 0.24
PHACTR4-206ENST00000632421 EIF3AQ14152 1382 aaKnown RBP16.54■□□□□ 0.24
PHACTR4-206ENST00000632421 IFT172Q9UG01 1749 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms