RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
MECP2-220ENST00000631210 KIF3BO15066 747 aa12.53□□□□□ -0.4
MECP2-220ENST00000631210 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.4
MECP2-220ENST00000631210 HRCP23327 699 aa12.52□□□□□ -0.41
MECP2-220ENST00000631210 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.41
MECP2-220ENST00000631210 PZPP20742 1482 aa12.5□□□□□ -0.41
MECP2-220ENST00000631210 ADAMTSL3P82987 1691 aa12.5□□□□□ -0.41
MECP2-220ENST00000631210 IQGAP3Q86VI3 1631 aa12.48□□□□□ -0.41
MECP2-220ENST00000631210 ABCC3O15438 1527 aa12.47□□□□□ -0.41
MECP2-220ENST00000631210 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
MECP2-220ENST00000631210 GGT6Q6P531 493 aa12.47□□□□□ -0.41
MECP2-220ENST00000631210 CEP152O94986 1710 aa12.46□□□□□ -0.41
MECP2-220ENST00000631210 MLECQ14165 292 aa12.46□□□□□ -0.41
MECP2-220ENST00000631210 FAM135AQ9P2D6 1515 aa12.46□□□□□ -0.42
MECP2-220ENST00000631210 NUP155O75694 1391 aa12.45□□□□□ -0.42
MECP2-220ENST00000631210 MADDQ8WXG6 1647 aa12.45□□□□□ -0.42
MECP2-220ENST00000631210 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
MECP2-220ENST00000631210 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
MECP2-220ENST00000631210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
MECP2-220ENST00000631210 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
MECP2-220ENST00000631210 ZC3H13Q5T200 1668 aaKnown RBP12.44□□□□□ -0.42
MECP2-220ENST00000631210 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
MECP2-220ENST00000631210 TET3O43151 1660 aa12.43□□□□□ -0.42
MECP2-220ENST00000631210 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
MECP2-220ENST00000631210 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
MECP2-220ENST00000631210 E9PCH4 1651 aa12.42□□□□□ -0.42
MECP2-220ENST00000631210 EFCAB6Q5THR3 1501 aa12.42□□□□□ -0.42
MECP2-220ENST00000631210 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
MECP2-220ENST00000631210 NPATQ14207 1427 aa12.41□□□□□ -0.42
MECP2-220ENST00000631210 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
MECP2-220ENST00000631210 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
MECP2-220ENST00000631210 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
MECP2-220ENST00000631210 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
MECP2-220ENST00000631210 WASHC2CQ9Y4E1 1318 aa12.4□□□□□ -0.42
MECP2-220ENST00000631210 RIMS1Q86UR5 1692 aaKnown RBP12.4□□□□□ -0.42
MECP2-220ENST00000631210 KANK1Q14678 1352 aa12.4□□□□□ -0.42
MECP2-220ENST00000631210 PLA2R1Q13018 1463 aa12.4□□□□□ -0.43
MECP2-220ENST00000631210 C3P01024 1663 aa12.39□□□□□ -0.43
MECP2-220ENST00000631210 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
MECP2-220ENST00000631210 ZMYM3Q14202 1370 aa12.39□□□□□ -0.43
MECP2-220ENST00000631210 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
MECP2-220ENST00000631210 NOS1P29475 1434 aa12.37□□□□□ -0.43
MECP2-220ENST00000631210 PKD2Q13563 968 aa12.37□□□□□ -0.43
MECP2-220ENST00000631210 FOXD1Q16676 465 aa12.37□□□□□ -0.43
MECP2-220ENST00000631210 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
MECP2-220ENST00000631210 PTPRTO14522 1441 aa12.37□□□□□ -0.43
MECP2-220ENST00000631210 PTPRMP28827 1452 aa12.36□□□□□ -0.43
MECP2-220ENST00000631210 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
MECP2-220ENST00000631210 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
MECP2-220ENST00000631210 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
MECP2-220ENST00000631210 PREX1Q8TCU6 1659 aa12.35□□□□□ -0.43
MECP2-220ENST00000631210 SYNMO15061 1565 aa12.35□□□□□ -0.43
MECP2-220ENST00000631210 SPATA31D1Q6ZQQ2 1576 aa12.35□□□□□ -0.43
MECP2-220ENST00000631210 CFAP65Q6ZU64 1925 aaKnown RBP12.35□□□□□ -0.43
MECP2-220ENST00000631210 ERVK-7P63135 1459 aa12.35□□□□□ -0.43
MECP2-220ENST00000631210 ANKRD30BQ9BXX2 1392 aa12.34□□□□□ -0.43
MECP2-220ENST00000631210 SPHKAPQ2M3C7 1700 aa12.33□□□□□ -0.44
MECP2-220ENST00000631210 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
MECP2-220ENST00000631210 TRPM2O94759 1503 aa12.32□□□□□ -0.44
MECP2-220ENST00000631210 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
MECP2-220ENST00000631210 ESF1Q9H501 851 aaKnown RBP12.3□□□□□ -0.44
MECP2-220ENST00000631210 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
MECP2-220ENST00000631210 TNRQ92752 1358 aa12.28□□□□□ -0.44
MECP2-220ENST00000631210 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.45
MECP2-220ENST00000631210 IDI1Q13907 227 aa12.26□□□□□ -0.45
MECP2-220ENST00000631210 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
MECP2-220ENST00000631210 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
MECP2-220ENST00000631210 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
MECP2-220ENST00000631210 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
MECP2-220ENST00000631210 ZNF142P52746 1687 aaPredicted RBP12.23□□□□□ -0.45
MECP2-220ENST00000631210 TMEM131LA2VDJ0 1609 aa12.23□□□□□ -0.45
MECP2-220ENST00000631210 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
MECP2-220ENST00000631210 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
MECP2-220ENST00000631210 ADGRB3O60242 1522 aa12.22□□□□□ -0.45
MECP2-220ENST00000631210 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
MECP2-220ENST00000631210 CLSPNQ9HAW4 1339 aa12.22□□□□□ -0.45
MECP2-220ENST00000631210 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
MECP2-220ENST00000631210 UBR1Q8IWV7 1749 aa12.22□□□□□ -0.45
MECP2-220ENST00000631210 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
MECP2-220ENST00000631210 CEP170BQ9Y4F5 1589 aaPredicted RBP12.22□□□□□ -0.45
MECP2-220ENST00000631210 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.45
MECP2-220ENST00000631210 KDM5AP29375 1690 aaKnown RBP12.21□□□□□ -0.45
MECP2-220ENST00000631210 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
MECP2-220ENST00000631210 KIF1BO60333 1816 aa12.2□□□□□ -0.46
MECP2-220ENST00000631210 LMTK3Q96Q04 1460 aa12.2□□□□□ -0.46
MECP2-220ENST00000631210 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
MECP2-220ENST00000631210 ARHGAP23Q9P227 1491 aa12.17□□□□□ -0.46
MECP2-220ENST00000631210 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
MECP2-220ENST00000631210 UHRF1BP1Q6BDS2 1440 aa12.17□□□□□ -0.46
MECP2-220ENST00000631210 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
MECP2-220ENST00000631210 SLIT1O75093 1534 aa12.16□□□□□ -0.46
MECP2-220ENST00000631210 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
MECP2-220ENST00000631210 PPLO60437 1756 aa12.15□□□□□ -0.46
MECP2-220ENST00000631210 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
MECP2-220ENST00000631210 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
MECP2-220ENST00000631210 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
MECP2-220ENST00000631210 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
MECP2-220ENST00000631210 LTKP29376 864 aa12.12□□□□□ -0.47
MECP2-220ENST00000631210 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
MECP2-220ENST00000631210 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms